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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0304400 |
| Transcript ID | LotjaGi2g1v0304400.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G26850.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2; TrEMBL-Plants: tr|I1JE40|I1JE40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77794835..77797778) extracted from Lotus japonicus Gifu genome v1.2.
CTTGAGTGGATGGTGAAGTATTGAATCAGAATTGGCCTTTTTCAGGTTTTTGATGGCAAAGCCAAGTTCAGCTGATAGTA GGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTTTATGTTGTTTCTTCTATATATTGGGCGCATGGCAGAGAAGT GGTTTTGGAAAGGGAGATAGTGTAGCATTGGAGATTACCAAGAAAGGTGCAGACTGTAATATAGTTCCGAATTTAAGTTT TGACTCTCACCATGCTGGTGAAGTTAGCAAAATTGATGAGGTTGATTCAAAACCTAAGGTATTTGAACCTTGCAAGGCTC GTTATACTGATTACACTCCCTGCCAAGATCAACGGCGTGCCATGAACTTTCCTAGAGGAAACATGGTTTATCGAGAGAGG CACTGCCCGCGTGAGGAAGAGAAGTTACACTGTTTGATCCCAGCACCTAAAGGGTATGTGACTCCATTTCCATGGCCAAA GAGCCGTGATTATGTTCCGTATGCAAACGCACCCTACAAGAGCCTTACAGTTGAGAAGGCTATTCAGAACTGGATCCAAT ATGAGGGAAATGTGTTTAGATTTCCTGGTGGTGGAACCCAATTTCCTCAAGGTGCCGATAAATATATTGATCAACTTGCT TCTGTGATACCTATGAAAAATGGGACAGTTAGGACAGCCCTGGATACTGGTTGTGGGGTATGTTTGCATTCATGTGATTA TGTCAAACTTATTTAGTCATTTTTTGTTCAAGCTAATTTAGTTATCAGCACAATTAGTTAGTTTTAGCTTTGTATCCTTA ATGTAAGGTTGTTTTGCACAGGTTGCCAGTTGGGGTGCGTATCTTTGGAGCAGAAATGTTGTGGCCATGTCATTTGCACC AAGGGACTCTCATGAGGCACAAGTACAGTTTGCTCTAGAAAGGGGTGTACCTGCAGTCATTGGTGTTCTGGGAACCATTA AATTGCCGTATCCATCTGCAGCCTTTGACATGGCACATTGTTCTCGCTGCTTAATTCCTTGGGGAGCAAATGGTGAGAAA TTTACAATATATAGTACTGTCATTTTTTATATGAAGTGCTTGCTGTAAATAAGAGAGCACAGTGTTTAGCTGCTCATTCT TGTTCTGTTTGACTTGGCACCTTATATCATCTCGATACAGATTTTGAAAAGTGAATCTTGTGTTTGTATCTGTAGATGGA ATATATATGATGGAAGTTGACCGAGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGAAGGT TAATTACAAATCCTGGCAGAGGCCAAAGGAGGAACTCGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTTT GCTGGGAGAAGAAGTCAGAGAAGTCTGAAATAGCCGTCTGGCAAAAAACTGTAGACTCTGAATCATGCCGAAGTAGACAA GAAGATTCTGGTGTAAAATTCTGTGAATCAACAGATCCTGATGATGTCTGGTATGGTCCTTCTTTTGGGGTTAAACCTTT AGTATATGTTGACATCACACTGCTGGTATGAAAACCTGAGTCCCAATTAACTTATGTTCTGAATTGAATGGCTGTTTTGT GACTACAGGTATAAGAAAATGGAGGCCTGCGTTACTCACAATGTTAAAATAAATGGTGATGTTAAGCCATTCCCACAGAG GCTATATGCCATCCCTCCTAGAATTGCCAGTGGCTCTGTTCCTGGAGTTTCAGTTGAGACATACGAGGATGATAACAAAA AGTGGAAAAAGCATGTAAATGCTTATAAGAAAACTAATAGACTCCTGGATACTGGAAGGTATCGCAACATTATGGATATG AATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCAATCTTCTAAGTTATGGGTCATGAATGTTGTGCCTACTATAGCCGA GAAACAAACACTAGGTGTCATATATCAACGAGGACTTATTGGCATCTATCATGATTGGTATGGCTTTCTATCTTCTTCCT CCTATTTTATTAATGGCCTTTCTTGATCATATATTTCAATACATGTTTCTGAAAGTATAATGTGATGTAGACATATAGTC TGCCAGTTAGTATATGCTATTGCTATCTTGTTTTGAATTATGACTAGGTGTACAATTTTTTTGTAATCAGGTTACTTCTT CCTCACATGTTTTTTCATTTATTTGTGTGTCCCTTTATGATCCAGGTGTGAAGCCTTCTCTACATATCCAAGAACATATG ACCTCATTCATAGCCATAGTCTCTTTAGTCTGTACAATGACAAGTAAGTATTCCTTGGTTATTTGATTATTCAATTATTC TTCCTATTACTTTAAATTTTTAATTCAATATCAATTCTTAATAGTTGTGGGCTTTCTTAGAGTGCAATTATAGGTTATAG TTTAGCTGGTATAAAAATTGAGTATAAACAATTGCTGTCATGAATCCTTGCTTCATAGTTCTCTTGACTTGCTGATCTGT GTATGCTGCTCCATGTTCACTAAAATCTTATTCACCAATCAATTTTTGTTTGTGGACCCCTGAACAATCTTCTTGAAGAG CTACAGCTGAGTGACTCCTTGGAATTTGGATTTACTTTTAGCTAAGGATTCGTGGAACTACTTGGTTTTAGTTGGCTTTG TTTTCTTTTTCAATCGTATTTGTTCTTGTGTCTCAACTCTCAACTCTCAAGCCTTATGTAATGATGATGCAGATGTAACA TAGAAGATATTCTTCTGGAGATGGACCGGATTTTGCGCCCGGAAGGTGCTGTGATATTCCGTGATGAAGTCGATGTGTTA ATTAAGGTAAAGCAAATTGTTGGAGGAATGAGATGGGATACTAAAATGGTTGACCATGAGGATGGTCCTCTTGTTCCTGA GAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCCGATTCAAATGCCACATCAACACATTAG
CDS sequence (LotjaGi2g1v0304400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAGCCAAGTTCAGCTGATAGTAGGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTTTATGTTGTTTCTT CTATATATTGGGCGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGTGTAGCATTGGAGATTACCAAGAAAGGTGCAG ACTGTAATATAGTTCCGAATTTAAGTTTTGACTCTCACCATGCTGGTGAAGTTAGCAAAATTGATGAGGTTGATTCAAAA CCTAAGGTATTTGAACCTTGCAAGGCTCGTTATACTGATTACACTCCCTGCCAAGATCAACGGCGTGCCATGAACTTTCC TAGAGGAAACATGGTTTATCGAGAGAGGCACTGCCCGCGTGAGGAAGAGAAGTTACACTGTTTGATCCCAGCACCTAAAG GGTATGTGACTCCATTTCCATGGCCAAAGAGCCGTGATTATGTTCCGTATGCAAACGCACCCTACAAGAGCCTTACAGTT GAGAAGGCTATTCAGAACTGGATCCAATATGAGGGAAATGTGTTTAGATTTCCTGGTGGTGGAACCCAATTTCCTCAAGG TGCCGATAAATATATTGATCAACTTGCTTCTGTGATACCTATGAAAAATGGGACAGTTAGGACAGCCCTGGATACTGGTT GTGGGGTTGCCAGTTGGGGTGCGTATCTTTGGAGCAGAAATGTTGTGGCCATGTCATTTGCACCAAGGGACTCTCATGAG GCACAAGTACAGTTTGCTCTAGAAAGGGGTGTACCTGCAGTCATTGGTGTTCTGGGAACCATTAAATTGCCGTATCCATC TGCAGCCTTTGACATGGCACATTGTTCTCGCTGCTTAATTCCTTGGGGAGCAAATGATGGAATATATATGATGGAAGTTG ACCGAGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGAAGGTTAATTACAAATCCTGGCAG AGGCCAAAGGAGGAACTCGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCAGA GAAGTCTGAAATAGCCGTCTGGCAAAAAACTGTAGACTCTGAATCATGCCGAAGTAGACAAGAAGATTCTGGTGTAAAAT TCTGTGAATCAACAGATCCTGATGATGTCTGGTATGGTCCTTCTTTTGGGGTTAAACCTTTAGTATATGTTGACATCACA CTGCTGTTTGTGACTACAGGTATAAGAAAATGGAGGCCTGCGTTACTCACAATGTTAAAATAA
Protein sequence (LotjaGi2g1v0304400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKPSSADSRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSVALEITKKGADCNIVPNLSFDSHHAGEVSKIDEVDSK PKVFEPCKARYTDYTPCQDQRRAMNFPRGNMVYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTV EKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPMKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHE AQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMMEVDRVLRPGGYWVLSGPPINWKVNYKSWQ RPKEELEEEQRKIEEVAKLLCWEKKSEKSEIAVWQKTVDSESCRSRQEDSGVKFCESTDPDDVWYGPSFGVKPLVYVDIT LLFVTTGIRKWRPALLTMLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| PANTHER | 2 | 386 | 385 | 8.9E-239 | – | |
| PANTHER | 2 | 386 | 385 | 8.9E-239 | ||
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 15 | 33 | 19 | - | – | |
| Phobius | 34 | 420 | 387 | - | – | |
| Pfam | 93 | 386 | 294 | 1.5E-133 | ||
| SUPERFAMILY | 115 | 336 | 222 | 7.55E-28 | ||
| Gene3D | 191 | 366 | 176 | 5.8E-12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0304400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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