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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0304400 |
| Transcript ID | LotjaGi2g1v0304400.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G26850.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2; TrEMBL-Plants: tr|A0A1J7IVQ6|A0A1J7IVQ6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77794887..77797778) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAAAGCCAAGTTCAGCTGATAGTAGGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTTTATGTTGTTTCTT CTATATATTGGGCGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGTGTAGCATTGGAGATTACCAAGAAAGGTGCAG ACTGTAATATAGTTCCGAATTTAAGTTTTGACTCTCACCATGCTGGTGAAGTTAGCAAAATTGATGAGGTTGATTCAAAA CCTAAGGTATTTGAACCTTGCAAGGCTCGTTATACTGATTACACTCCCTGCCAAGATCAACGGCGTGCCATGAACTTTCC TAGAGGAAACATGGTTTATCGAGAGAGGCACTGCCCGCGTGAGGAAGAGAAGTTACACTGTTTGATCCCAGCACCTAAAG GGTATGTGACTCCATTTCCATGGCCAAAGAGCCGTGATTATGTTCCGTATGCAAACGCACCCTACAAGAGCCTTACAGTT GAGAAGGCTATTCAGAACTGGATCCAATATGAGGGAAATGTGTTTAGATTTCCTGGTGGTGGAACCCAATTTCCTCAAGG TGCCGATAAATATATTGATCAACTTGCTTCTGTGATACCTATGAAAAATGGGACAGTTAGGACAGCCCTGGATACTGGTT GTGGGGTATGTTTGCATTCATGTGATTATGTCAAACTTATTTAGTCATTTTTTGTTCAAGCTAATTTAGTTATCAGCACA ATTAGTTAGTTTTAGCTTTGTATCCTTAATGTAAGGTTGTTTTGCACAGGTTGCCAGTTGGGGTGCGTATCTTTGGAGCA GAAATGTTGTGGCCATGTCATTTGCACCAAGGGACTCTCATGAGGCACAAGTACAGTTTGCTCTAGAAAGGGGTGTACCT GCAGTCATTGGTGTTCTGGGAACCATTAAATTGCCGTATCCATCTGCAGCCTTTGACATGGCACATTGTTCTCGCTGCTT AATTCCTTGGGGAGCAAATGGTGAGAAATTTACAATATATAGTACTGTCATTTTTTATATGAAGTGCTTGCTGTAAATAA GAGAGCACAGTGTTTAGCTGCTCATTCTTGTTCTGTTTGACTTGGCACCTTATATCATCTCGATACAGATTTTGAAAAGT GAATCTTGTGTTTGTATCTGTAGATGGAATATATATGATGGAAGTTGACCGAGTTCTAAGACCTGGTGGTTATTGGGTGC TTTCGGGTCCTCCAATCAATTGGAAGGTTAATTACAAATCCTGGCAGAGGCCAAAGGAGGAACTCGAGGAAGAACAAAGA AAGATTGAAGAGGTTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCAGAGAAGTCTGAAATAGCCGTCTGGCAAAAAACTGT AGACTCTGAATCATGCCGAAGTAGACAAGAAGATTCTGGTGTAAAATTCTGTGAATCAACAGATCCTGATGATGTCTGGT ATGGTCCTTCTTTTGGGGTTAAACCTTTAGTATATGTTGACATCACACTGCTGGTATGAAAACCTGAGTCCCAATTAACT TATGTTCTGAATTGAATGGCTGTTTTGTGACTACAGGTATAAGAAAATGGAGGCCTGCGTTACTCACAATGTTAAAATAA ATGGTGATGTTAAGCCATTCCCACAGAGGCTATATGCCATCCCTCCTAGAATTGCCAGTGGCTCTGTTCCTGGAGTTTCA GTTGAGACATACGAGGATGATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAACTAATAGACTCCTGGATAC TGGAAGGTATCGCAACATTATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCAATCTTCTAAGTTATGGG TCATGAATGTTGTGCCTACTATAGCCGAGAAACAAACACTAGGTGTCATATATCAACGAGGACTTATTGGCATCTATCAT GATTGGTATGGCTTTCTATCTTCTTCCTCCTATTTTATTAATGGCCTTTCTTGATCATATATTTCAATACATGTTTCTGA AAGTATAATGTGATGTAGACATATAGTCTGCCAGTTAGTATATGCTATTGCTATCTTGTTTTGAATTATGACTAGGTGTA CAATTTTTTTGTAATCAGGTTACTTCTTCCTCACATGTTTTTTCATTTATTTGTGTGTCCCTTTATGATCCAGGTGTGAA GCCTTCTCTACATATCCAAGAACATATGACCTCATTCATAGCCATAGTCTCTTTAGTCTGTACAATGACAAGTAAGTATT CCTTGGTTATTTGATTATTCAATTATTCTTCCTATTACTTTAAATTTTTAATTCAATATCAATTCTTAATAGTTGTGGGC TTTCTTAGAGTGCAATTATAGGTTATAGTTTAGCTGGTATAAAAATTGAGTATAAACAATTGCTGTCATGAATCCTTGCT TCATAGTTCTCTTGACTTGCTGATCTGTGTATGCTGCTCCATGTTCACTAAAATCTTATTCACCAATCAATTTTTGTTTG TGGACCCCTGAACAATCTTCTTGAAGAGCTACAGCTGAGTGACTCCTTGGAATTTGGATTTACTTTTAGCTAAGGATTCG TGGAACTACTTGGTTTTAGTTGGCTTTGTTTTCTTTTTCAATCGTATTTGTTCTTGTGTCTCAACTCTCAACTCTCAAGC CTTATGTAATGATGATGCAGATGTAACATAGAAGATATTCTTCTGGAGATGGACCGGATTTTGCGCCCGGAAGGTGCTGT GATATTCCGTGATGAAGTCGATGTGTTAATTAAGGTAAAGCAAATTGTTGGAGGAATGAGATGGGATACTAAAATGGTTG ACCATGAGGATGGTCCTCTTGTTCCTGAGAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCCGATTCAAATGCCACA TCAACACATTAG
CDS sequence (LotjaGi2g1v0304400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAGCCAAGTTCAGCTGATAGTAGGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTTTATGTTGTTTCTT CTATATATTGGGCGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGTGTAGCATTGGAGATTACCAAGAAAGGTGCAG ACTGTAATATAGTTCCGAATTTAAGTTTTGACTCTCACCATGCTGGTGAAGTTAGCAAAATTGATGAGGTTGATTCAAAA CCTAAGGTATTTGAACCTTGCAAGGCTCGTTATACTGATTACACTCCCTGCCAAGATCAACGGCGTGCCATGAACTTTCC TAGAGGAAACATGGTTTATCGAGAGAGGCACTGCCCGCGTGAGGAAGAGAAGTTACACTGTTTGATCCCAGCACCTAAAG GGTATGTGACTCCATTTCCATGGCCAAAGAGCCGTGATTATGTTCCGTATGCAAACGCACCCTACAAGAGCCTTACAGTT GAGAAGGCTATTCAGAACTGGATCCAATATGAGGGAAATGTGTTTAGATTTCCTGGTGGTGGAACCCAATTTCCTCAAGG TGCCGATAAATATATTGATCAACTTGCTTCTGTGATACCTATGAAAAATGGGACAGTTAGGACAGCCCTGGATACTGGTT GTGGGGTTGCCAGTTGGGGTGCGTATCTTTGGAGCAGAAATGTTGTGGCCATGTCATTTGCACCAAGGGACTCTCATGAG GCACAAGTACAGTTTGCTCTAGAAAGGGGTGTACCTGCAGTCATTGGTGTTCTGGGAACCATTAAATTGCCGTATCCATC TGCAGCCTTTGACATGGCACATTGTTCTCGCTGCTTAATTCCTTGGGGAGCAAATGATGGAATATATATGATGGAAGTTG ACCGAGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGAAGGTTAATTACAAATCCTGGCAG AGGCCAAAGGAGGAACTCGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCAGA GAAGTCTGAAATAGCCGTCTGGCAAAAAACTGTAGACTCTGAATCATGCCGAAGTAGACAAGAAGATTCTGGTGTAAAAT TCTGTGAATCAACAGATCCTGATGATGTCTGGTATAAGAAAATGGAGGCCTGCGTTACTCACAATGTTAAAATAAATGGT GATGTTAAGCCATTCCCACAGAGGCTATATGCCATCCCTCCTAGAATTGCCAGTGGCTCTGTTCCTGGAGTTTCAGTTGA GACATACGAGGATGATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAACTAATAGACTCCTGGATACTGGAA GGTATCGCAACATTATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCAATCTTCTAAGTTATGGGTCATG AATGTTGTGCCTACTATAGCCGAGAAACAAACACTAGGTGTCATATATCAACGAGGACTTATTGGCATCTATCATGATTG GTGTGAAGCCTTCTCTACATATCCAAGAACATATGACCTCATTCATAGCCATAGTCTCTTTAGTCTGTACAATGACAAAT GTAACATAGAAGATATTCTTCTGGAGATGGACCGGATTTTGCGCCCGGAAGGTGCTGTGATATTCCGTGATGAAGTCGAT GTGTTAATTAAGGTAAAGCAAATTGTTGGAGGAATGAGATGGGATACTAAAATGGTTGACCATGAGGATGGTCCTCTTGT TCCTGAGAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCCGATTCAAATGCCACATCAACACATTAG
Protein sequence (LotjaGi2g1v0304400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKPSSADSRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSVALEITKKGADCNIVPNLSFDSHHAGEVSKIDEVDSK PKVFEPCKARYTDYTPCQDQRRAMNFPRGNMVYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTV EKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPMKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHE AQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMMEVDRVLRPGGYWVLSGPPINWKVNYKSWQ RPKEELEEEQRKIEEVAKLLCWEKKSEKSEIAVWQKTVDSESCRSRQEDSGVKFCESTDPDDVWYKKMEACVTHNVKING DVKPFPQRLYAIPPRIASGSVPGVSVETYEDDNKKWKKHVNAYKKTNRLLDTGRYRNIMDMNAGLGSFAAAIQSSKLWVM NVVPTIAEKQTLGVIYQRGLIGIYHDWCEAFSTYPRTYDLIHSHSLFSLYNDKCNIEDILLEMDRILRPEGAVIFRDEVD VLIKVKQIVGGMRWDTKMVDHEDGPLVPEKILIAVKQYWVADSNATSTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| PANTHER | 2 | 602 | 601 | 0.0 | ||
| PANTHER | 2 | 602 | 601 | 0.0 | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 15 | 33 | 19 | - | – | |
| Phobius | 34 | 609 | 576 | - | – | |
| Pfam | 93 | 596 | 504 | 2.5E-227 | ||
| SUPERFAMILY | 115 | 336 | 222 | 1.82E-27 | ||
| Gene3D | 191 | 365 | 175 | 1.2E-11 | – | |
| Coils | 426 | 446 | 21 | - | – | |
| SUPERFAMILY | 445 | 558 | 114 | 3.75E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0304400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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