Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0311300 |
| Transcript ID | LotjaGi2g1v0311300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT1G59640.1 transcription factor BIG PETAL P (BPE); Swiss-Prot: sp|Q0JXE7|BPE_ARATH Transcription factor BPE; TrEMBL-Plants: tr|I1J5H6|I1J5H6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0311300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78541877..78550149) extracted from Lotus japonicus Gifu genome v1.2.
TAGTCAGCTCATATTAGAATGTCTGATGCTCGCCGATGTAAATTGAGCTGTTTTCTTGACCAGTCGCCCGCTTATTGTTT AGTGCGAGCATCTGCAGTGATGAGTTTAGTCACATGGAAATTGAGCTCTTTTTGCGACTTGTTATCTGCTTACAGTTTAG TGCGAACATCTACCTTCTACAGTGATGAGTTTAGTTACTGCTGTCAGCGGTGAAAACTCGAAGCTAAAGAAATATAGAAA AAGGGAAGAGGAGAGTGGAAGGAAGTGAGTTGGGTTTGAGAGTCCCAAGGTGGGTGTGTCTCTATAACAGTGAGAGAGAG AGAGAGACAGAGAAATATAAACACTGTGCGCATCACCCTCCACTGTCCAAGGAGATCAACACAAGCAAACACCAAACCTG CATTTCCCTCTCTCTCTCTCTTGCTCTCTCTATCTTCATCTTGAACTGCTTGAATGGTTATGCTACTGTGCTCTTGTTGA ACTGTGAGATTTGAGATTCTCGGATCGTTCAATGGATCCGGCGGCGATGATGAACGGAGGCGCCAACACGGCGTCGTATC ACCTGGCGGAGATCTGGCAGTTTCCGCATCCGGTTGCTGGTGATTCCGGCGGCGGGTTGGGGCTGAGAAGGCCGCAGTTC GGACACGGGTTTGGTGATTTTACTACGTGTCCGACCCGGGAGGATCCGGGTTCTGACCCGGTTAGTTCGGATCACAGGCA AGCTTTAACGGTGAGCCTTGGCCGGAAGCGGCGCGACTCCGAGGAGGAATCTGTTAAGGGTGTCTCCACCAGCAATGGCG GTGGCAATGGCGTGGTATTTGCATCTAAAATTTGTTAAAGAAATGATGTTGAGTATGAATTTAGTTCAATGTGCAATTGG GTATTAAAATATGGAAAAATGGATCTGAAATTGTTGATTTTTTTTATGTAACTAGTACTATTTGATTGATGATTCAAGTT TTGTTATTTGAATTTGGATTGTGCAGAATGATGGTGGTGGTGATGGGAAGAGGATGAAGATATCAGGGAACAGGAATGAG AGCAGTAAAGGAGGAGAAGCAGAAGTCAGTTCAGGAAAGCCTGCGGAGCAAACTAGTAAGGCACCACCTGAGCCTCCTAA GCAAGACTATATCCATGTCCGAGCTAGAAGGGGTCAAGCTACTGATAGTCACAGTCTTGCTGAAAGAGTAATTTTCACCC TTACAAGTTCCTACTAGTAATCCCTTTAAATTGTGTTGTGTAATTTTGTTAGAATAAATATATAGAATTTGGTCTGTGAG AAATGTTACTTGTGTTGCTTTGGCTTTTGAAAATTGAATCTATGGAAGTTGGTCTTGGAAGGGAAGGGATGAAGTTGTTA GTAAGTTGGAAACTTCAATTGGGTGAACTTGTTAACAAGTTGACAACTTCAGGGACCTATGTGTATAGGTGGAAACTTTC TGGGATTAGCAACACAAGTAAGATCTTTCATGGATTGAATTCTATATTTTTTATGTTGTTGTTTTAGGTAAGTTTTTGCT TAACTATTTGCAAAGATCGTTTTCTTAACCACGATAACAGTAATTTAGCTGCAGGCAGGCTCAGCTAGAGCACATGTGAA ATGTGATGCCATGTGGAAATTTGCCTGAGAAAGTTGGTTTAAGAAAAATGAAACTGTTTAAACTACTTGTATCTTTATGG AAATATAAGGAAATATTGAATTGTTGGATATTTTGAGATAGTAGTTTTTCACTTGGTTTTCTAATGGAATGTTGATGGAT GCTGTGGGACAGGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTAGTTCCTGGTTGTAATAAGGT ATGGTTTTACTGCCTGCTTAGTTTTTTTGTCTACTCTCTCCACATTTGTATATGGAAACGGATCATCTCAATTGTAAAAA AAAACTTGACCATGTCAAGTTCCACCATCTCACCATTGATTTTTGTCTTTAATAATTAAAGAGAGAAAAGAAAATGATAT CAATGGTTAGATGATGAAAATTGACGGTCAAGTTTTTTACAATTGAGAGAATCTTGATCCTTTGTATATATGTAAAAAAC GAGAGTAAATAAGCATGAAGGAAGAAATTAAAAAGGTTACTTGTTGGATGAAAAGAAAAGACACATCTGCTAAGAATGAT CTTGTTGGTAACACAGCTGAAAATCATTTCTCAATCCTCATGGTTAGTTTATGTGCTGTGTTTTTGTGTAAATTACAATA GAGGAACGTTCTTTGATTCAGGTTATCGGGAAAGCATTGGTCCTCGATGAGATAATCAATTATATTCAATCACTTCAGCG CCAAGTTGAGGTATTGATCCTTTATCTCATTATCTGAGTTTCTAAAATTTGTATATGCTTTGTTGTTGATAATGAGTCTT GATTTTTTTTTGTCACAGTTCTTGTCAATGAAGCTTGAAGCAGTAAATTCAAGACTGACCCCTGGCATTGAAGTGTTTCC TCCTAAAGATGTAAGTATTGAATTGCATTCTTAGTTTTTCATGTGAACTATTTAGTCCAAATAATTTGAAAGCTGATTTT ATCCACTTTATAACCGCTCATGTGATATTGTGAGGATATCTGGGTAGAAACTTCTTTATACACACTATTTGTGCCACAAA CTCAACCTTTTTAAGCATAAAAGGTTTTAATATCTAATAATTCATCATATAAAGCAAGAATCAATATTGAATTTGCTTTG TTTTTTATACTAAGAAGGAATTATATATTAGACCCTGGGGGGACCACACTGGTGGTTGATTTGCACGTGTTTGTACACAC TTTTGCAAATTGTTGGTGGAGTCTTCAATTCCTTTCTTCCTCAAATAAATCAGATTCTTGAGGGTGCTTTTCATGATTGG ATACTTAAGTGAAAACGGGTTTTAAATTAAATATATTTTATAGTAGATGATAGCAGCAGGCATGAAACATTATTCTATGT AAAAAAGGGTAAATAAATAAGTGTGTAAAAATTCACCCTGAAGTTAAAATTTGGGTCCAAAAGATTCAGAGTGATTGGTG AAGTGAAGCTTTACATTATTGTAGCAAAACCTTGAGTCTAATGAAACATCAACTTGTGTTTCAGTTTGATCAGCAAACAT TTGATACAGCCGCCATGCCGTTCCCTTCACAAGCTACCAGAGAGTATAGCCGGGGTTCATCACCAGAGTGGTTACATATG CAGGTTGGAGGTGGTTTTGAAAGAGCAACGTAGTCTATGAAATCCCATCAAATTATAATAAATGCATATAGGATCTGTAG TTTCTCCTTCTGTGCTCTCCAAAATCATATACTCCTGGTTTTAAAGTCCAAAGGACGCTTCATCAAGTTTTCTACACGAG GCATGGAGCTGTTATTTGTTTACACAGGTTTGCTTCATCTAGTATTTAAGCAACTCCATTTGTTAGTCTGTTGGAAAATG AATTCATTTACCCAATATGTAACTTATTGAACTGGACTATAGGCTCTCTATGCGGATACTCATAACCTTGAAAATGGTTA TTATTGTTGTAAAAGAATGTTGCTTGTCCTGAATACATAATGCTTATATATTGTGTAATGGCCTCAACATTGATGTTTGT TGATGAAACTATGTTAAATAAATTAAGTTCACGTGGTATTGTTAAATTGATTAGTTAGTCTCTTTAAGCACAATTCGTTG GGCATACTCTTTGGTTTTTTTTTATAGGCAAATGTTAGTGGTTAGTTGTTAGTAAGTTAGAAAATCCCTTCAAATTTCCC TTCCAGGATTCGAACATTGGACCTTCCCCTCCCCAACTCTTATCTCCCCTAGCTCTTACCACTTGAGCTAACCCTCGGGG ACGGACATACTCTTTGGTAACTTTCTGCTAGGGATTAACTGTATAATTGAATATCAGCGTGAATGGACTATTATCCTAAA TTATAAGAGTATCGTTCACTTTTTATCTTGAAGTAAGTGTTAATGTCCATTTGCATTGATGTCAATGGATATCCAAACAT AGCCTAAGGAGTGTCATACATGTGAGCTAGATAAATTGGCATCAGTTATGTTTTCATCTAACTATGCTATGGTTATTATA ATCTATATCATATTCATGGATGGAAAACTTTAATTTCCTAAAGTGTTTTGCTTTATATGATACTTAGTTTCGCAGCCATT TGCATGTCAACTAGACAAGTTAGGCAAGAGTTTTTTTTTTTGGGTGCAAAAGCTAAAAGACAAAATAGTCTAAGGCCTCA AAGAACCCCACAAGCTCATAAGTTCCTTGGGCTCCTAACTTAGTAAGCATCTTCCGCCCGAAGGATTCCCTTTACAAACA GTGTGTTTAAAGGATAACTCCCAAATCCCAATGATGCTGAACCAAAGACTCAATCTGTCTCAAAATAATACTATACCACC TCCTTAGTAATGAGTTTGATAGCTAACATAGAATCATGAGAAGACAATAATGTTACTAAAACCAACTTCCTTGCAAAGTA AAAGCCCCTAAAGAATTGTCATTAATTCCGCCTCCAAAATTCCAGAATAACCAATGCGTCCATAAAACCCCAAAAGCCAA CTGCCAGATACATCCCTCACAAGACCTCCAACCCCTGTTGTTCCAGGGTTTCCAAGAGAACTACCACCCATTTTTAAACG AAGAAGTATGTTAATGACTAATGAGACTTATAACTTGTTTGACATGCCTTATTTTTTTTGGTACAAGACATAAAAAGGAC AAAAGAAAAAAGGGAAAAATGGATACAAACTCCGAACAAAAAATAGGCAGCTGCTAACACACTCGGTGGATCCTACCATA TGTCAAACAATACATCACACTAAGCACCAAATTTCACCAAAAAAACCGTACAAGCCGTTTTTCCATAAAATGTGACTAAC AATGGCTAACCATTATCTTGCTAATAACTCTTTCATATTCTGAATGAGAGTAGCATACTTCCTAATTCCTGATAGTGAGA ATGAGCATTCTCAATTATGGAAACAAATTGAAGCGAATCTGAAATAAGTCAAATAGCCCATGGAGAATTGCTAACAATTT CTATAAAAAATTCCATTTGATGGATATCAGAATTTCCAAAGAATGCATTAAATCCAAATAACATGTCCTTGTGTATGATA ATCTTAGAATATATAATATATTATGATTTATCACTATTTTTTGGTATGTTTATAAAGAAATGTACATACAACAAGAACTG CTAGTGCTGTAGTTTAACAACACCTATACAGAATTTTAACAAGAACTGTAGCCAACATGTCACGACTCCAATGCAAAACT CATGAATATAATTGACCGTCTATGGCTTGTGTAGTAAATACAGGAAGTGATAATAATACAGTAGAAGAATTTGTTGCTAA GAAGGATGAAGGTCTTCCTTGTATTCGTCAGTGCTGCAGTTTCTTGTGCCACTGAGCATTTCTGTTTTGAAAAACAACAA ATCATACAATGTTTTTGTAAATTTTACTGAAAACAGAATAAAAATACAAAATATGATATCATATTAAACAGGTTCTAACA TACAATGGATATAAGGTCCAATCTCCCGAAATATGTACACACACATAGTCACAACAGCTTTAAGTTTTTATGTTCTTCTA TGAGTATAAGTTTTTGGTGAACATTAGCAACTCTTGTTTTACCAAACACATTACAAATAACAAGGCCTTCCTGTTGTCAA TGAAGTGGTGGTATTTTCCTAGATTATAGGTTTAGAACAATGCACCTAAAGCTTATGACCTCCGAACTCTATCACTTGAG CAATGTGAGGGTGATAAAATAACAAAACTTTTATGTGGGACTTGTAGCACCATCAAATGTAAAATGCTTTTGTCCCTACC CAATAAGGCCTAATAGGGCCCTCTCAAAGGCCAGGTTCCATAACTCCATTTTTGGATCTGGAAGGTCGGGCCAGATCAAG TCGACCCGACCTGCCCTGGGATACGCTTAACATCCTCCCATGTTGCATAGTGATCTCCCATGGCATGTTTGGTCGTCAGT GTTACTAGATAGAAGCATCACAACACTAAAAATCATGACACCCTCCTACAGCTCAAGTGGTAGAGCTGGAGGATTATGTG CAAACTAAGAAAATACCACCAATCCTCTGAATAAATGTATGAATCAGTTATATACCTCAAGAAAATTCCACTTCATATGC AAACTACCATCAAACTAAACTTACATAAGCCATTTTTGTTAAAACTTGAAGAGAGGTCTAGGCTACAGCACCAAAGGAAT TTCCTCCTTGATTGAAACTATTCCCACTTGACTGGAAGTAAGCAACTGCTGCCCAAATCACACGCAGGATTAGAATCGCA GCAAATACAGTGCCCCCAAGTGTGCAGATGACCTATGATTCATAGTCAATATTCACCAACAGCTGTTATCTATTACTTGA TAATGTATTTTCCAATATAAAGCAAAGAAATATTGTGAAGAAATTAGAAATATGACAGAACCTAGTTCAGCTATGCGTGA GTGTAGCTTCTATGATCAGAAATTCATGTGATATGTTTCGAACAACGCTTCAGAATTGGTATTTTCACAGTTTGAAGGTA TATGTTCCAAGAGCCAAAATATAAGAATGATCTAAAACCTAATCGACCTATAGTCGTACAAGTTACATCATCAATATCAT TGGTTGGTAGTAATTAAACGATGCAAATAATAGGAGCATGGAAGGTTGCATTGTGCATTTAGAGTGTGCAAATAGCATTT CAATACATGAATTCTGCAAAAATGAATAGTAAATTGTGTACCAAACAAAGAAATGCATCTGTTTTCCTGGAAAGAGTAGG AGATATATTATTTGCACACACGTATTTGGAAAACCTTCCTCACATCTCTCATTTACACCTCAGAAAAAGGCTTGATTCAA TTCCAGTAGTGTTTATAAGGAGAGAAAGTGGTTGAAAAGATAACTAGAAATGTGAAGTAAAACAAACTGAGGTAAGGTTT CAACTAGCCATGAACTCTACATTAAGCCACACAGTAAGGGGAAGCAATACCTCAAGAAATGCTTTGAGAACAGAAAGTGA AGCAAGCAGCAGAGTCCCATCAACAGCAAAAGAAACCTGAATTATCCCATTCACATGGAAAGCAATAAGAGAAAGCAGCC AAAGATAAATGTAACCACATAAACTTTCAGAAAGGTAGCAGGCGACACATTCAAATTCTACCTTGCTTATGTATCTAACA CTCAAAAGGAAACCAGGCCACAAGATTAATGCACGTTCGGTTTAGCTTAAATTAATCAACCAAGTATTGGTGATATTAAT AGGCCTTGTTTGGAAGAGCTTATTTGAGCTTAACTTATAGCATAAGCGTTTACGCAAGTGTTTTGGACAGCTTATATAAA TAGTTTATGACCCACTTATAAGTGTTTATGCAAGTGTTTTGAGCTTATTTTCGTAAGCCATTCATATTAGCTTATGAATA AAAGTTTATGCTTATCTAACATATTTTCAGCTTATTTCAATAAATTTCTCAAATTCGCTTATGAATTAAGCTTTGAACTT ACAAGCTGGGGCGGTATTACTCCACCAGGTAAAACAGAGCGAGAGGCCTTCTTGGCTCGCTTAGACACTTTCCTAAACAT GCTCTGCAAGAATCTGATCAACAAATCAACACTACTCTCAGCGTCGTCATCATCACACTCTTCTTCAATCCCACCATAGC CATCGAAAGCAGCTTGATCCATCTCATAGGGTTCTCCACCAATTGAGCTATTCACCTTCACAACAGAGACAGTCAACAAG GTTAGCCGAATCAGAAAATCAACTGTGTCACCGTTTACCTGAACGAGAAAAACATGAATACCTTGCTGATTAAGGGATTT GAACGATGGTTGTGGTAGAATCCGGAAGGGAAGGGTTGGTGACGAAGACAAGGAACATTGTTTGGTGAGAAGTGGCGAAG GTTGGAGCGTGGGTGGCGCGTGAGATTGATGAACGGTGCTGCAGCAGTGGCAGCAGCTCCTGCCATTTGGAACAAAACAT GAAGAAGGTCTTTAGGATTCGGTTATTATCGTGGTAGAAGACAGGAAGAGGAGCATAAACATGAACCTCATGTTTTTTTT TTGTCCAAAACCTTAGTTAATTAGTTTATTTCTTTATGGATCTTTGTTGTTTGGGCCTGAGTATGGATAATTTGATTTTT GACCAATTTTTTGTAAGAGGATTAGAAGCACACATCATTCTTTTAAGGGTACACAAGAGATTAAACTTTGTAACCTACAT AGGAAATTATAATTTGGTAAAGTTGTGTTGTTG
CDS sequence (LotjaGi2g1v0311300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCGGCGGCGATGATGAACGGAGGCGCCAACACGGCGTCGTATCACCTGGCGGAGATCTGGCAGTTTCCGCATCC GGTTGCTGGTGATTCCGGCGGCGGGTTGGGGCTGAGAAGGCCGCAGTTCGGACACGGGTTTGGTGATTTTACTACGTGTC CGACCCGGGAGGATCCGGGTTCTGACCCGGTTAGTTCGGATCACAGGCAAGCTTTAACGGTGAGCCTTGGCCGGAAGCGG CGCGACTCCGAGGAGGAATCTGTTAAGGGTGTCTCCACCAGCAATGGCGGTGGCAATGGCGTGAATGATGGTGGTGGTGA TGGGAAGAGGATGAAGATATCAGGGAACAGGAATGAGAGCAGTAAAGGAGGAGAAGCAGAAGTCAGTTCAGGAAAGCCTG CGGAGCAAACTAGTAAGGCACCACCTGAGCCTCCTAAGCAAGACTATATCCATGTCCGAGCTAGAAGGGGTCAAGCTACT GATAGTCACAGTCTTGCTGAAAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTAGTTCCTGG TTGTAATAAGGTTATCGGGAAAGCATTGGTCCTCGATGAGATAATCAATTATATTCAATCACTTCAGCGCCAAGTTGAGT TCTTGTCAATGAAGCTTGAAGCAGTAAATTCAAGACTGACCCCTGGCATTGAAGTGTTTCCTCCTAAAGATTTTGATCAG CAAACATTTGATACAGCCGCCATGCCGTTCCCTTCACAAGCTACCAGAGAGTATAGCCGGGGTTCATCACCAGAGTGGTT ACATATGCAGGTTGGAGGTGGTTTTGAAAGAGCAACGTAG
Protein sequence (LotjaGi2g1v0311300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPAAMMNGGANTASYHLAEIWQFPHPVAGDSGGGLGLRRPQFGHGFGDFTTCPTREDPGSDPVSSDHRQALTVSLGRKR RDSEEESVKGVSTSNGGGNGVNDGGGDGKRMKISGNRNESSKGGEAEVSSGKPAEQTSKAPPEPPKQDYIHVRARRGQAT DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLTPGIEVFPPKDFDQ QTFDTAAMPFPSQATREYSRGSSPEWLHMQVGGGFERAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 279 | 279 | 1.9E-104 | – | |
| PANTHER | 1 | 279 | 279 | 1.9E-104 | ||
| MobiDBLite | 32 | 147 | 116 | - | – | |
| MobiDBLite | 73 | 88 | 16 | - | – | |
| MobiDBLite | 117 | 136 | 20 | - | – | |
| Gene3D | 155 | 228 | 74 | 1.0E-15 | ||
| CDD | 156 | 213 | 58 | 1.00531E-10 | ||
| SUPERFAMILY | 156 | 226 | 71 | 8.37E-18 | ||
| ProSiteProfiles | 158 | 208 | 51 | 15.828 | ||
| Pfam | 162 | 209 | 48 | 1.7E-8 | ||
| SMART | 164 | 214 | 51 | 1.0E-10 | ||
| Coils | 205 | 225 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0311300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…