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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0314200 |
| Transcript ID | LotjaGi2g1v0314200.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT1G24120.1 ARG1-like 1; Swiss-Prot: sp|Q8VXV4|DNJ16_ARATH Chaperone protein dnaJ 16; TrEMBL-Plants: tr|A0A0B2R4V6|A0A0B2R4V6_GLYSO Chaperone protein dnaJ 16; Found in the gene: LotjaGi2g1v0314200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78935946..78940015) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGGGGCCTCGCTCGAAGTCGGAGAAGAAGCATGACGCTGATAACCAGCTCCGGCGGGACCCATACGAGGTCCTCGG CGTCTCCCGGAGCTCCACCGATCAGGAAATCAAGACCGCTTACCGCAAAATGGCACTCAAGTATGATTTCAATTCCCGTA GTTCTTTGCTTCTTGCGTTGTTATTGTTTTGAAATTTTGAATCGTTGCTGGTAAACGGGGAGGGGCATAATCGACTTTTA CGGATGAACACTTGGTCTTTTCTTGATTGGTTGATAGCTATGAATCTGTGTGATTTTGATTCTGGGTGTTATAGTTCATG AAGGATAGAAACTAGTTCAATTTTACATTGATTCTTGAGTATGGTGAAGATAGTGTATCCACTGTACTGGGTTAAGTTTC TTGAATATTGATATGATTGAAAAATGCTACTGCAGCCACTTGGTTTATTAAGCCTAGGTGAAGTCATGATTAGTGTTGAT TTTTTATGATTTTCCCCTCTTCATGAATCCATTGGTGGGTTTACTGTGATCATTGAGCTAAAATTAATTTGAAATTGAGC CAACTAGATGGGTTTCGATTAACTGGGTTGACGACGGTGACTGGTGAAGTAGTCTTCTTAACTACTGAGTTGTCTCTGGG TGTTGACAGAAATAATACTCAATGCTTGATGTTATACTTCATCTAAATTTTATAAGGGTAGTGTTATGCATTAAATGACA TCTTGCCCGGAGACCTTTGAATAACTAGTATACTTGGGAGAAGTTGCATTGTAGAAGGTTGTTTTATCTGTACCAAAATA CTTTGGGTTCTAGAATCAAATTAAGATGATATAGGTCAGCTTAATGATTAATCTGGAAATTGAAAAGAAAACATTGACTA GAACATCAAAAAACATTCAATTTTACATTGCTTTGGTTTTACACAGAGCACTGGTTTCACACCTATTGATTGTTCATCTA TATAAGCCCTAATAGCCTTCCAAAAGTAATATCAGAACAAAACCTCTAATCATGTGATCATATCAGTTTCATACATATGA TGCCAGCACTTAACAGTTTACAGTAGACCTTAATGGCTTAATAGACTTTTACTAAAAATAAATTAATACCCTTTCAGGTG GTGCACCTGGTTATTTTAACTGACAGTTCTTCTCTTCATCTTTTCATCTGAATTCTGAACATTGTTGGTGAATTTATTAA TTGGCTCAATCTATTCTATTTCAGATACCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCTGATATGTTTAAAGAGG TTACCTTTTCATATAATATCTTGTCAGATCCAGATAAACGGCGTCAGTATGACTCAGCTGGCTTTGAGGTGATATAAGTT AATATTTTGAACCATTAAGACTTTAGGAGGGTCATCAATCCTCCAGGTTTTCATTTTTCATTGCTATTAAGAGATTCCAA TTTTATAAATTGTATCAATTTCTTTTTCCAAACTTGTTTTTTTCAAATGAAAAGTTATCTTGGACGACTTCATAATGAAT AATTAGTGATGAAATATTTCATGCTTACCTGTAGGCTGTTGAATCAGAAAACCAAGAGTTGGAGTTGGATCTTTCAAGTT TGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGGTAAGAAGGCTGGACGTGCTTATCTTCCTGTTCACTTCTAAGT CCTTTTTTGTTGTTGAGTTCTTAATTTATATATTTGAATTCTTCCCTTCTCTTTTCTGGGTTTCCCTCCTTTCAATCATT AACTTTCTCAATACATGACAGCAAACTGGGTGTGCCAATTAAGACAACAGTATCTGCAACTGTTCTTGAAGAGGCACTCA ATGGTTCAGTGACCATTCGTCCACTTCCATTGGGACAATTTATATCTAAAAGGGTGAGTTTTTTTTTTACTTGAATTCAT TGATCCTGTTTTAGTCACAATTCGCTATTGTTTATTTTTGTTTTGGTGCATTCATATGACAGGTTGAGAAACAATGTGCA CACTTCTATTCAGTTACAATAACAGAAGAGGAAGCCCGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGAGAAAAGCAA GTTCAAGGTTTGAATTTAATTCTCTGGCATTGATATCTGAAAAAATTGCATGCAAGATATGCTCTACTGATTAATTTTTT TTACCTTGGTTTATGCCTTTATGGAGATTGATTCCTTTACAGAATTGTGTAAAAGTATATGATTTCCTTGAAAATAGATT GATTCTTTCACAGAATTGTATAAAATATAAGATTTCCTGGAAAGTTGGCATTTCTTCAAGAATAATGAGTTGGAACTCTT AGTCAAATTATAGAGCATTTTGAATTTACTGGGAAGTCCATCATTAGGTTATATATCTCCTTCCTTTTAGAGATTAACAG AGGGTAATATTTTTCATGCTTAATGTAGCAGACTTGCTGATAAATCCTTTAGGTGGGATGTCTATTCACTGACATCCAGT CCCCAAGTTTAAGCAGCTTCAAATATCCCATATATGTTTGAAACTATTAATATTAGGAAGATAATTCATCACTTTTCGTG CTCTTCTGTATGTACTGATTTCCTATATGCTGGATCTCATTTGTAGGGAGCTTTGAACTTAGACTTTTGTGAGAGTAATT CTATATTTTACTTCACTACAAAATAGTGATGAACTATCCATTGATTCTGTAATTTATGTGTGCACTGTTTTTGTAGTTTC AGACTTTTTTTTCTCGCACAATGTAAAACATTGATTTGCACATTTAAACTATTGTTTTACTTTGCTTCATATATAATTTT TAATTATTTTGAAAGTATTAATCTGTTAGGTTTTGAGATGATCTTATTTTAATGGTGTAAATTAATTTTATTTCTACAGT TATTATATTTTGATCGGGAAGACAAAGGTGGCTTAAGTCTTGCACTCCAGGTATTAGACATTTTCTCATGTGTGAACATA ATATGTTTATTGTTATTATCAATTATTTCTGATGCAATGTATAGTTATTGGATCTTGGATATTAGTCATTCTCTGGTAAT TCTTGTATAATTTTTGTGCATCTCAGATCTGAGCATACTATGGTGTTACTAATTATGGTTGTAGGAAGACTGTGCTAAAA CAGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGGTTTACTGTTTATCGGTTGGATCAGACAATGAACTCTGTGAGT TGCTATACTCTAAATGGATAATTTTCACTTTAAATTTATACTGTCATCATTTTCATTTGGTTCTTCCAATATTTTTCTAC AGATAGCTGCTGCCAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAGCCATGTGAATTGACAGAATTG AAGGCCGGTACCCATGTGTTTGCCGTTTATGGTAAATGCACATTTTTATTCGCTATGAATTAGTGATGCTGTTTATGTTT GTTGACTGCAACTATGCTCTATATAATTTGACTATTACATACTGTTGAATTTCTTCTAGGTGACAACTTTTTCAAAAGTG CAAATTATACAATAGAAGCCCTGTGTGCTGCACCGTTTCGTGAAGAAAAAGAAAATTTAAGAACCATTGAAGCTCAAATT TTGTCTAAAAGGGCAGAAATATCGAAGTTTGAGGCCGAATATCGCGAGGTGTGTGCTTTGGGACTAGCATTCCATATGTT TCTAATTACATCTCTCAATCAAATCTAACACTGGGTCTTTTGTAGGTTCTGGCACAATTCACGGAGATGACAAGTAGATA TGCACATGAAATGCAAGCAGTGAGTTATTCTTTTCCAAGGGTTTCTATGTGGGCGGAGAGGCAGTGACTGAACTGAAGCT ATTTATTCTTTGTGCAGATTGATGAGCTATTGAAACAAAGAAATGAAATACATGCATCATACACTGTTGCTCCTTTAAAA CGAAGTACGAGTAAGAGCAGACCCAAACGTTCTTCGAAGGAGGCAAATGAAGATGGCCAAGCAAGGGAGAAGAGGAGCTC AAGAGATCGATCAAAGAAGAAGAAGTGGTATAACCTCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA
CDS sequence (LotjaGi2g1v0314200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGGGCCTCGCTCGAAGTCGGAGAAGAAGCATGACGCTGATAACCAGCTCCGGCGGGACCCATACGAGGTCCTCGG CGTCTCCCGGAGCTCCACCGATCAGGAAATCAAGACCGCTTACCGCAAAATGGCACTCAAATACCATCCTGACAAGAATG CTAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCATATAATATCTTGTCAGATCCAGATAAACGGCGT CAGTATGACTCAGCTGGCTTTGAGGCTGTTGAATCAGAAAACCAAGAGTTGGAGTTGGATCTTTCAAGTTTGGGTGCTGT CAATACAATGTTTGCAGCACTTTTTAGCAAACTGGGTGTGCCAATTAAGACAACAGTATCTGCAACTGTTCTTGAAGAGG CACTCAATGGTTCAGTGACCATTCGTCCACTTCCATTGGGACAATTTATATCTAAAAGGGTTGAGAAACAATGTGCACAC TTCTATTCAGTTACAATAACAGAAGAGGAAGCCCGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGAGAAAAGCAAGTT CAAGTTATTATATTTTGATCGGGAAGACAAAGGTGGCTTAAGTCTTGCACTCCAGGAAGACTGTGCTAAAACAGGGAAGG TTACCTCTGCTGGAATGTATTTTCTTGGGTTTACTGTTTATCGGTTGGATCAGACAATGAACTCTATAGCTGCTGCCAAG GATCCAGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAGCCATGTGAATTGACAGAATTGAAGGCCGGTACCCATGT GTTTGCCGTTTATGGTGACAACTTTTTCAAAAGTGCAAATTATACAATAGAAGCCCTGTGTGCTGCACCGTTTCGTGAAG AAAAAGAAAATTTAAGAACCATTGAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCGAAGTTTGAGGCCGAATATCGC GAGGTTCTGGCACAATTCACGGAGATGACAAGTAGATATGCACATGAAATGCAAGCAATTGATGAGCTATTGAAACAAAG AAATGAAATACATGCATCATACACTGTTGCTCCTTTAAAACGAAGTACGAGTAAGAGCAGACCCAAACGTTCTTCGAAGG AGGCAAATGAAGATGGCCAAGCAAGGGAGAAGAGGAGCTCAAGAGATCGATCAAAGAAGAAGAAGTGGTATAACCTCCAC TTAAGAGTTGATAAGAGAAAGGCTTGCTAA
Protein sequence (LotjaGi2g1v0314200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGPRSKSEKKHDADNQLRRDPYEVLGVSRSSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRR QYDSAGFEAVESENQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGSVTIRPLPLGQFISKRVEKQCAH FYSVTITEEEARAGFVCRVQSSEKSKFKLLYFDREDKGGLSLALQEDCAKTGKVTSAGMYFLGFTVYRLDQTMNSIAAAK DPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFREEKENLRTIEAQILSKRAEISKFEAEYR EVLAQFTEMTSRYAHEMQAIDELLKQRNEIHASYTVAPLKRSTSKSRPKRSSKEANEDGQAREKRSSRDRSKKKKWYNLH LRVDKRKAC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 1 | 409 | 409 | 1.5E-226 | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 409 | 409 | 1.5E-226 | – | |
| Gene3D | 5 | 104 | 100 | 1.2E-29 | ||
| SMART | 20 | 78 | 59 | 2.3E-29 | ||
| SUPERFAMILY | 20 | 90 | 71 | 4.32E-27 | ||
| Pfam | 21 | 83 | 63 | 1.4E-26 | ||
| ProSiteProfiles | 21 | 86 | 66 | 22.274 | ||
| CDD | 21 | 75 | 55 | 8.71896E-22 | ||
| PRINTS | 23 | 41 | 19 | 4.4E-23 | ||
| PRINTS | 41 | 56 | 16 | 4.4E-23 | ||
| PRINTS | 58 | 78 | 21 | 4.4E-23 | ||
| ProSitePatterns | 63 | 82 | 20 | - | ||
| PRINTS | 78 | 97 | 20 | 4.4E-23 | ||
| Coils | 298 | 318 | 21 | - | – | |
| MobiDBLite | 355 | 396 | 42 | - | – | |
| MobiDBLite | 368 | 386 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0314200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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