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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0314900 |
| Transcript ID | LotjaGi2g1v0314900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thiol-disulfide oxidoreductase DCC; TAIR: AT1G24095.1 Putative thiol-disulfide oxidoreductase DCC; Swiss-Prot: sp|P40761|YUXK_BACSU Uncharacterized protein YuxK; TrEMBL-Plants: tr|G7K2V8|G7K2V8_MEDTR Thiol-disulfide oxidoreductase DCC; Found in the gene: LotjaGi2g1v0314900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79050004..79053594) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAGAGAGGAAATGAGTTTGTTATAGGTCCAAGGTTCAAGGCCTTGTTTGGTTCCCATAAAAAAAAGCCCTTTGGTT TAGCGCTATTTCTGCAACCTATGCAATTGCATACACAACGCGAAGCAAGAAGATGAACGCAAATACTATGATGAAGCGAG GGCTCGCAAGCTTGACCAGCACGGCAGTAACCACCAGATTCTCCTCCTGCTCGTCTCTCCGGTTGTTCTGTTCCGACGCC GCTGCTGCTGACGTGGACGCCCCTGCTTCTTCGGTTCTGAAGACCGTCAACCCCACTTTGCTTCAGCCCAGAGTGGTCCT CTACGACGGCGTTTGCCATCTCTGCCACCGAGGTAACGATCACTCCGTTTTGCACTCTTCTGTTTGTGCGTACCATCTGT TCTATGTATTGTCTGATCCATTTCCATTGCGGTGTGTTCTTTTCAGAATCCCACAATTAGGGAAAGATTGTTAGTTTTAT CATAAATTCCCCAATTGGTGAAATATAGGTTACATTTATCGTAATAGCATGGTTGATCGAACATTCGACTCGCGTTGTGA AAAATGTTGTAGATCATTTTTCTTCTGAGGTTTTTGTGTTTTAATGTGCAATTTGTCTGGAATCTTCCACCTTATGTTGC TTAAGTTCCTTGCATTGCCATACACTCATACAGTGTTGAAGGCATTGTTTTAAATTGCGGTATGCAAATGTAATTTTTGT GGCCATAACATTAATGATTTAGAACTTTCCACAAATGCATGATGACTGTAATTGCGCCGCTTTCGTCCATAATTTTCCAT AATTTCAAGGATTCTGGTGTAACTGCAATCGCGATTCTGAGTTTCAATATAAAATGAGCAGTGTGGAAGACATAAAGCAG GGAATCTTATAAGCTTAGGAGTTGAAGAATGTGTGTCATTTTTAATTAGGACCTGTGGTAGTTGACAGTTTGAATGTCCA AAATAATAGTGATTAGAGCCAATGCTGACCCTGATTTGTTGATCCTATAGATATGTGTGTCATACTGTCATGAACTGTTA GCATCCTATAATCAATATCGACTTAGTGTGTTGTTTCAATTTTTCAGCTGAGCAGTGAGTTTTCTACCAACCTGTTTTCA GCTAACTATAGTTTTAGTGATTAAAGTATAATTTAGATCATTTCTTGAGGATAGGTTTAAATGTGGAAAGAAACTGCCTC TTTAATTGAACATGATAGACTTGGAGAAACTAGAGGTGTTCTACATAGAGGTTTAGTTTAATTGCTGTAAAATTTATTAT TGGCATTTTACAAGAAAGTTGCTAGATCAATTATTTATTCTGTTTAGTACTATCAATTTTCCCAATTCTATTGTCTTATG CATTGTTCCACGTTCGTTCTGATTTTTTTGTATTCCATAACTACTTTCTTAATTTTCACCTAGGGTTTTATATTGCATTT CTTACGATTCTGTCTTGACAGGAGTTAAATGGGTAATCAGGGCAGACAAGGACAGAAAGATCAAATTCTGTTGCGTTCAG TCTAATGCTGCTGAGCCCTATTTGAGAGCATGTGGTCTTGAACAAGAGGATGTCCTCCGTCGATTTTTGTTCGTTGAAGG CCTCAATGTGTTCTCTCAGGGTTCAACTGGTTAGAATTCTCTCATTTATTTAACTTCAATGGCCATTCTATCTTTGTCTT TCTTTAAATTGTTCTTAATGCATACTCTGAGTTTGTGTGCTTGTGTATGCATAAAATTTTAATATTAATTCCAGTAGATC TCTAGTAACTTAGGAAGGGTTTAATCTGAGATTGGTTTTGTATCTTATGTGTTTAGGTATCTGCACATGGATACGGAATA TTACTAACTCAATCTAGGATTCATGAATTTGTTTCTGTATTGAATTCATGAAGTAAGAAATATTTCACTATTTTGTAGAA AGGGTGGCCTAGTGCGGACAAGGCTACCATTAGTTAATTATAGCCTAGAGAAGACAAAGATCACTCAGATGTAAGCAGCC ATATACCGTGTTTAACATAAAAGTGCAGTAGAGTTATTGTAACAAAGTTGACACTAAGAATCAGAATTATGAACAATTTT CTTGGAATCAAGAGGGAATAGTGGTTTTGACTTGTGAAATGGACGGGCAATATTTGTCTATGAAAGATTAGACCTATGGT TATTTGATTTTGAAAATAATTTCAAAATGAAGTGTAAAACATTTTCTTTTTGGACGAATACTCTTTTTTTTTTCTTTTCT GTTTTTCCTGAAACAGTTACATGACAAAGTTTATTTGCAAATCCTTGCATCAGTTGTTTTCCACTAGTGTTTCTTGTCAA ATTCAATCTCCTTTCCGGGTTTCCCCCGTGAGTCTATTTTCAGAGTCATTTGACTCACTTAAGAGTCTTCTACATTGTTT CAGTTTTTATGGGTGTACTTTTCTTTTTCTATTTGCAGGTTAATATTTTATGCCTGTATCATATTGAATGAAGTTTAAAA ACCTGGCCAATTTTTAATCTCATCCTTCTTTCTCATTATTTGGTTATTAACCAACCCAACTTGATAATGCCTGGGTTCAC AGTTTTCTGTCCAAAGTAAAATACTCTACGTTGATGATGCCTCCCATCTTGAAGTCTTTTTGTGAAATCTGTATGCTTTA ACATCGTAGAAGTTTTACCGTTACACTACTCCTGTGAATGTTTTAAAGAACATGTAAATTTTGGTAGAGTCCATATTCTG CCCGACTGTATGGAGAATAAGTCCTCAATCTAAACATAGCGAACTTGCCATCCTTTAGGCCAAATTTCGAAATAAAATAT TTAGATTAATATGCATAACATAACAGATGAGCATTTTTTGTCAATTACATTTTCACCATTCCCTGCTGCTTTCCATGTAA TTGTGTGTCAATCTCATTGTGTCATATGACTCTGCAGCTGCATTGCGAGTGGTGTCATACTTGCCACTCCCTTACTCTGT TTTAAGCTCGCTCTGTGTGGTTCCAACTCCAATCAGGGATGCAGTCTATGATTATGTAGCGAAACAACGGTATGAATGGT TTGGTAAGGCTGAAGACTGTTTGGTTTTGCAAGAGAAAGAGCTGCTTGAGCGTTTCATAGATAGAGAAGAACTGATGAAT CGAGATTGGGATTCATAAATTGGTATCATTATCAACCACAATTTACACTTTAAGGTCCAGCTTCTTCTTTTCTGTTATCT TGCAGTCTTCTACAGCACTAAACTGTAAATTTGAAGTGCTTCCAGGAGTAGGATCCTTCACCCAAAATACTTACCCTTGT TCAACTTGCAATTTCTTTCAATTGTGATTAAGGCTTTCAACTTCTAGATGCTATATTGTCTAGGATTTATTTTTTAGTAG TAAAATTTATATACACAATTTTTTCACCTTTTTTTTATATCATTTGTTTTATGGTGCTAAGACGACAGAATATTATACAC ACCATTGGTTTGCTTCTGCTATTAAGGCTGCAAGCTTGGTATCACAGCATGGTGTCAGATTCAGATTATACTGAATTCGA CAACTTCTCTAACAGTGAAGTTTATCATTTACATTATCCCGTTAGTTAATTGTTCTGTACGCTTTTCAACT
CDS sequence (LotjaGi2g1v0314900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACGCAAATACTATGATGAAGCGAGGGCTCGCAAGCTTGACCAGCACGGCAGTAACCACCAGATTCTCCTCCTGCTC GTCTCTCCGGTTGTTCTGTTCCGACGCCGCTGCTGCTGACGTGGACGCCCCTGCTTCTTCGGTTCTGAAGACCGTCAACC CCACTTTGCTTCAGCCCAGAGTGGTCCTCTACGACGGCGTTTGCCATCTCTGCCACCGAGGAGTTAAATGGGTAATCAGG GCAGACAAGGACAGAAAGATCAAATTCTGTTGCGTTCAGTCTAATGCTGCTGAGCCCTATTTGAGAGCATGTGGTCTTGA ACAAGAGGATGTCCTCCGTCGATTTTTGTTCGTTGAAGGCCTCAATGTGTTCTCTCAGGGTTCAACTGCTGCATTGCGAG TGGTGTCATACTTGCCACTCCCTTACTCTGTTTTAAGCTCGCTCTGTGTGGTTCCAACTCCAATCAGGGATGCAGTCTAT GATTATGTAGCGAAACAACGGTATGAATGGTTTGGTAAGGCTGAAGACTGTTTGGTTTTGCAAGAGAAAGAGCTGCTTGA GCGTTTCATAGATAGAGAAGAACTGATGAATCGAGATTGGGATTCATAA
Protein sequence (LotjaGi2g1v0314900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNANTMMKRGLASLTSTAVTTRFSSCSSLRLFCSDAAAADVDAPASSVLKTVNPTLLQPRVVLYDGVCHLCHRGVKWVIR ADKDRKIKFCCVQSNAAEPYLRACGLEQEDVLRRFLFVEGLNVFSQGSTAALRVVSYLPLPYSVLSSLCVVPTPIRDAVY DYVAKQRYEWFGKAEDCLVLQEKELLERFIDREELMNRDWDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 38 | 38 | - | – | |
| Phobius | 1 | 38 | 38 | - | – | |
| Phobius | 10 | 20 | 11 | - | – | |
| Phobius | 21 | 38 | 18 | - | – | |
| PANTHER | 29 | 199 | 171 | 1.7E-96 | – | |
| PANTHER | 29 | 199 | 171 | 1.7E-96 | – | |
| Phobius | 39 | 202 | 164 | - | – | |
| Pfam | 62 | 173 | 112 | 1.2E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0314900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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