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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0318000 |
| Transcript ID | LotjaGi2g1v0318000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase WNK-related; TAIR: AT1G60060.1 Serine/threonine-protein kinase WNK (With No Lysine)-like protein; Swiss-Prot: sp|P0C7P8|LHWL1_ARATH Transcription factor EMB1444; TrEMBL-Plants: tr|I3S0D7|I3S0D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0318000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79295926..79298514) extracted from Lotus japonicus Gifu genome v1.2.
TATTTGTACTGTTTGAATGTTTGAGTATCATTACATATAATGTGTGAATAGAGAGAGAAAATAAAGGTATAAATGTGAGA TTTCCTTGTTGGTGTGTGCTTATATAAAGGAGGATAGGATGTTGCAGTTCCCCACTTAAACATAGCTAGGTAAAGAGTAA GAGGGTACAAAGGAAGAGAAGATATCAAGTAGCTCCTATCCTATAATTGATTGTGAGGATTTGATGGAAGAACATCTCAC TCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAGTGGGTCTATGCAG TCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTAAGGAAAGCAAAATTAAGACCAATCAATTCTACCTCAA AATGTCCATGGAATGAGATTTTTAGCACTAGGCACAAACATCACACATATATTAATTATAACTTTATAAAAACACATTTC CATGTTATTACATTTGCTGATTTTTCAATCTTGCTTATAGGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAAC AGAAGGAATTGGTAATGTTTTCAGAGTTTAACTAACCTCAATAGTGGAAAATATGTTTCACTTGTCAATTAATTAACAGT TTGCTGTTATGAATGTGCATGTAGGATATTGGTCTGGGAAGATGGGTTCTGCAATTTTGCTGCCTCAGCAGCACCTGAAG TTAACTCTGGTGATTGTCCTACCTCATCTGTTTATGGGAACTGTGAGTTCCAGCCCTACCAAGGTCTGCAACCTGAGCTC TTCTTCAAGATGTCTCATGAGATCTATAACTATGGTGAAGGGTATGCATCTAATCTAAATAATATATTACTTAATTACAT TCCTTATATTTTGTTCTAGGAAGATACATGACCAAAAATCAAAGAGGTTGTTAATTAGATTTCATGGAACAGTTTGATAG GAAAAGTGGCTGCAGATCACAGTCACAAGTGGATATATAAAGAACCTAATGATCAAGAAATCAACTTCTTGTCAGCATGG CACAATTCAGCAGACTCAGTAAGAAAAACCCCCCATTCTTGCTTATGCTTACACATTAAATTCCAAATTTGATTGCTAAC ATAATCTGAAGTCATTGATGTGAGAAATAATCATGATTTCATGTTAATTTATTTATGCTTCCCAAAAGAGAGTATAAGAG AAGTGTCCTCATTAATTATATATATTTTACAGCACCCTAGGACATGGGAAGCACAGTTCTTGTCTGGTATAAAGGTATGA TGACAATTCATATGTGCCTTTCATACAGGATCTCTCCTTTCTTTCTTTATTTGATTCAATTACATATCTTGCAGACCATA GCCCTCATTGCTGTTAGAGAGGGTGTTGTTCAATTAGGAGCCGTACACAAGGTTCTCTCTTCTCCCTTCTCTCTCACTCT CAAACATTCACAAACACGTTACAACTTGTGCAAGAAATAATTTAACAAATCAACAAACTTGAACATACAAACACATAACA GACACCTCATTTTTCACAATATCTCTTCTTTTCTTACCTGACTCTGAGTGTATGTTGGATGTATGCAGTATGAGTACAAA TGTCTACATATCATTTTCCTTTTAACAATTTACACACTGATATAACTTTATTTTGTTTGTCCATGGCATACTCAAGGTGA TTGAAGACTTGAGCTATGTGGTTCTATTGAGGAAAAAGTTCAGCTACATTGAGAGCATCCCAGGGGTGCTGTTACCACAC CCTTCATCTTCTGCATACCCTTACAAGGTAGAAGGGTATGGACCACCAGAACAGTGGCATTTCCAAGGAAATCTTGCTCC ACCAGCTGAGTTATACAATGAGCATTACAACCTTCCACTGAAGATAACACCCTCCATGAGCAGCCTTGAGGCACTGCTCT CTAAACTCCCCTCGGTCGTCCCGCCTCATCTACCACCACCAACACAACCACCACAGTCACATGTTCTGCCATCACAACAA AGGCCATTGGAATTCATGGGAATGCAGAAAGTGGCGAAGGAAGAGTTAGATGAGGAGGAGGTGTATAGGCCTGAACTTGA AATAGGTGAGAGCAGCAGTTCCATGCCTGCAGGGTACCACCACCACCACCATCAACATCAACAACAACACCATTTCCATC AGCAACAAGATCAGAATGTTAGTGGCAACAACAATAATGGGTTTTGAGTTTTATCAATTAGATGTTTTAATTTTAAAATG AAGTGGAGTTGATGAAAATTAATCCTAATTGAGTTAAGTCCTAGCTAACATATTGTAGTCATGAGCTGTTAGTTAATTTC AGTAGTCTTATGATAAATAATAGTTAACTAGTGCATTTTCAGCTTAGTGCTTGTGATGTTGATTCTTAAATTTTTCTAGT GTGTATTGTAGTATCAAATGAACTTCCATTTCATGCATGCGTGTATATACACATATCTGCAGCTTCTCTAAATGTGTCAG TGGTAGTCACAGAGCGAATCTAGCACAATGTACTTCAACATCAAAGACTGCAACTGTTTAAGGAGGTTTAGTGTAACATG TATAATAATTATTGTACCTTATAAATGCC
CDS sequence (LotjaGi2g1v0318000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAACATCTCACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTC TCAGTGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATG ATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGTCTGGGAAGATGGGTTCTGCAATTTTGCTGCCTCAGCAGCACCT GAAGTTAACTCTGGTGATTGTCCTACCTCATCTGTTTATGGGAACTGTGAGTTCCAGCCCTACCAAGGTCTGCAACCTGA GCTCTTCTTCAAGATGTCTCATGAGATCTATAACTATGGTGAAGGTTTGATAGGAAAAGTGGCTGCAGATCACAGTCACA AGTGGATATATAAAGAACCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGACTCACACCCTAGG ACATGGGAAGCACAGTTCTTGTCTGGTATAAAGACCATAGCCCTCATTGCTGTTAGAGAGGGTGTTGTTCAATTAGGAGC CGTACACAAGGTGATTGAAGACTTGAGCTATGTGGTTCTATTGAGGAAAAAGTTCAGCTACATTGAGAGCATCCCAGGGG TGCTGTTACCACACCCTTCATCTTCTGCATACCCTTACAAGGTAGAAGGGTATGGACCACCAGAACAGTGGCATTTCCAA GGAAATCTTGCTCCACCAGCTGAGTTATACAATGAGCATTACAACCTTCCACTGAAGATAACACCCTCCATGAGCAGCCT TGAGGCACTGCTCTCTAAACTCCCCTCGGTCGTCCCGCCTCATCTACCACCACCAACACAACCACCACAGTCACATGTTC TGCCATCACAACAAAGGCCATTGGAATTCATGGGAATGCAGAAAGTGGCGAAGGAAGAGTTAGATGAGGAGGAGGTGTAT AGGCCTGAACTTGAAATAGGTGAGAGCAGCAGTTCCATGCCTGCAGGGTACCACCACCACCACCATCAACATCAACAACA ACACCATTTCCATCAGCAACAAGATCAGAATGTTAGTGGCAACAACAATAATGGGTTTTGA
Protein sequence (LotjaGi2g1v0318000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAP EVNSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPR TWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGYGPPEQWHFQ GNLAPPAELYNEHYNLPLKITPSMSSLEALLSKLPSVVPPHLPPPTQPPQSHVLPSQQRPLEFMGMQKVAKEELDEEEVY RPELEIGESSSSMPAGYHHHHHQHQQQHHFHQQQDQNVSGNNNNGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 358 | 358 | 4.3E-175 | – | |
| PANTHER | 1 | 358 | 358 | 4.3E-175 | – | |
| Pfam | 14 | 205 | 192 | 5.0E-34 | ||
| MobiDBLite | 328 | 366 | 39 | - | – | |
| MobiDBLite | 350 | 366 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0318000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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