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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0322800 |
| Transcript ID | LotjaGi2g1v0322800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein trichome birefringence; TAIR: AT1G60790.1 trichome birefringence-like protein (DUF828); Swiss-Prot: sp|Q8VYR3|TBL2_ARATH Protein trichome birefringence-like 2; TrEMBL-Plants: tr|A0A1J7HCN9|A0A1J7HCN9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0322800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79757731..79765236) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAACTTGCATTTATTTCATTTCAAGGGGTATGAAAGTTTGAATATACGACTTGTTGATGAAGTAATATTTTGACACC TTGAGTTTAATGAGAATTGAATATGAATACATACCATTGATATTTAAATTTTAGAAAGAATGCTAAGTTAATGGCTGTTC ACTGTTGAGTTTAACGTATGGAAATGCTAATCAGTTACAATTTTAATAAGGTGGTTCGTTTCAATTTTGTAATTTGAAAG ATTATCCTAAAAGCTAGAACTAGATCTTGACCATTTTTACCATTTACTTTCGATCACTTTAAGATTCGTCCTAGGAAAAA AAAAACCGACTCATAGTATTATCAATTATGCAGTGTCACAACCCTACAATACACAGGTGCATTGTTCTTGTTCCCACTCT CCACTCACTCTCTGCCATTGCCACTGCCACTGCCACTCATCTCTGAAACCACGTTCTTGTGTTTCTTTCTCTTCTTCCAA ACACGGTTCTTCTTCTATGCATTGGCTTTGTTCCATTTCTTCTCCATGGACTCCAACAAGAAACTACCATTCTCAGAGCC ATTTCTCTCTCAGAGGAGAAAGGTCTTGTCCGGTTTCAGTTTAGGCATTGGTGCTTCTCTCCTCTTCCTCACTCTTCTCT TCCTCAATCCTTCCTTCAAGGTTCCCAATGTCCAAGTCCTTCTCCAAGGATCTGATCAAAACTCTTCCTCTTCTTCCTGG CATTTCCCCTTTTCCACCTCCCCTTCGAGCAACGCTTCCGTGAGTTCTCTGCAGAGAAAAAGTGAAGTGAATGTGTCAGT GGAGGCTTTGGAGAAAACCCATCTCGGGAATCTGAATAACCATCGTGGAAATGCAAGCTTGCATGCTGAAGAACAAGGGT TTCCACCGGAAACAGGTGCATTGGTCGCTGGAAAAGAGAATTTCTCGGATCCTAATGGGGTGGCTAAAGATGGAGGAGCC TTGCTCGGTGGGAAAAGAGAAATTGCTGCGAATTTAAGCGTGTCGGTTGAAGTGAACACCGACACGGTGATGCAGAAAAC TATGGAAGGAGGGTTACAGAAGGAAAACAACAATATGGGAAATTCGTCGTTGGATGGAAATGCTGTGGAGGGAAAGAATG AAGGGGAGTTGATGAAGAAAATGCAGGATGGTTTCCTCGGAAATTGTGACATATTTGATGGAAGTTGGGTTAGAGATGAT GATTCAAAGCCATACTACCCATTGGGTTCTTGTCCTTATGTGGATAGGGATTTTGATTGTCATCTTAATGGGAGGCCTGA CAGTGAATATGTGAATTGGAAATGGAAGCCAAATGGGTGTGACATTCCAAGGTATGATTATTGATTACTAGTTTACACTA TGAACTGAGAAATATTTTTAATTCAGAATAGGACAAAGTAAAAAAGTCAAAGCAAGTTTTCTATGTTTTTATGTGAGTAA GGAATTACAATGAATCAGTAGGATTGCTAATTTTCATGGAGTTTCAGTTTGATTGGTGTGAGTTGTGACAATAAATTCAA AGGGAATCTTGCTGGTGAACTAAATTTCTGCAGAATATAAGAGTAAATTATTGCTTGGTCCTCCTTATTGTAAATGCTTG TAAGTTTCAGAGACAAAGGGATAGAGTGGAAAGGGAAGGGAATAGGATATCACTGTAGGCTACCTTCCTTCCCTTAAATT TTTCACCGCACCAAAAGAAAAGGTATAGTGAAGAAGGGGTAGAAGGGAAAAGGAGATTCATTTCCTATATTGGGGTTTTT ATAAAGGGAAGAAAGGACAGGTGAACAATTTTAGGTGTCAAATTGAGTATAATGGTAGTTTGATCCCTTGAAATGTACTT CATTGAAATGATGTGTGTGATTCAGCCCTTAAACTACGAACTCACTTCACATTACTCCCTATTAAAGATAGCAAAAGGAT TGATTAAGTTATCCAAGTTTGATTAATTTAAGAACTGAGTCATACATTATGTTAATTATGGGGCTAAAATGTGAGTGGGG TGCATTTGGAAGAACCACAATGTAGTTTTGGTTTACAGTCATGTCAGTTATTTTAAACCATTGAATAAATAAACGCATTC CTTGTATGTTGAATGGTTGATTAATATTGATGTGACCTCAGTTTGAATGCAACTGATTTTCTGGAAAAGTTGCGAGGACA GAAGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCCATGGTGTGTATTCTATGGCAAAGCATTAGGG ACAAAAAACGTGTCTATGAAATTTCAGGGAGAACAGAATTTAAGAAGAAAGGTGTCTATGCTTTTATGTTTGAGGCAAGT TTCTGGTACATCTGTGAGATTTTGCCTAGTATAAACCTTGTAATGTTACTCATTGATGTTTTGTTTTGGGTTATATTTGT AGGATTATAATTGTTCTGTGGATTTTGTTAGCTCACCGTTTATTGTTCGAGAGTCAACTTTCAAAGGCAAAAATGGGTCA TTTGAGACCTTAAGGTTGGATTTGATGGATCAGACAACTTCCATGTATCATGATGCTGATATAATAGTCTTCAATACAGG CCACTGGTGGACCCATGAGAAAACATCGAAGGGGTAAGTTCAGTCTGTCTAATATATAAACACTGCTTTTAAATTATCTA TGGTTCCGTGCTTCAAAGTGTTCTTGAAATCCATTGTCAGAATGGTGCTTCAAAGTGTTCTTGAAATCCATTGTCAGAAT GGTTCTTCTTAAATTTTCACGATATTTGTCAGAATGGTTCTGCTTTTTAATGTTTTTTATCCTTAATAAGTTATAAGCAT TTGGAAGTAAGTTTTTTATTTTGCTGTCATCTGGTACTGTTACAGAGAAGACTATTATCAAGAAGGCAACCATGTCTACC CAAGACTCAAAGTTCTGGATGCATTTACTAGGGCATTGACCACTTGGGCTAAGTGGATTGACGACAATATCAATGCCAAT CGAACTCAGGTTTTCTTCAGAGGATACTCAGTTACCCATTTCAGGTATTAGTCTTTTACATAGCTTCCAAAGTTTGATAG TCTGGACTTGCTACTCATTTCTTCCTTTACATTGACTCTAAAATATGTTGAATTAACTTTATGGCTGAAAATTTATGTAA CAGTTAAAACTAGACATGCAAACTGCCCAAATCCCTATCTCTCTGCTATTGACCACCACTCTCTTTCCCAAATTCACTCA CATCACTCACCCTATTGGAAATATATTTATGTATATATCAATTAAAATGTCTTCTGTTTGAAGCTTGAGATTGTAGAACC AGATGATAATATACTTTTAAATTTGAACTTGCACGAGATCAGTTTATACTTCTAGTATAAAGAAATTTAATTAGAAAGAC CTTAGTAGTTTACACTTACACAGTATACAAGAGGTGGATAATTTATGTAATCTCAAAGGTTGAAAACCTAGTCACAGCAA TCCTCTTTAGTCTTTAGTTTTTTTTATAAGCCTCTTTAGTCTTTAGTTACTTTTACATTTAGTCCTGCATGAAACTTCTT TAACTGCTTTATATATGTTATTGTGATGATTTGTTTAATATTCTACCAGATTCTTTCAGAAAAATTATACCATTTTTAGG AGTCTACCAACTTAATCCATGTTTATTCTATAACAACATTAAATGTGGAGACTGTATTTGTAGTTTTTAACTTTTTATAC CGTTGTCCAGATTATCTATTAGCAAATAGCAATACACTGATTCATATTCACAGAATAGTAGGTACCCGTACATGTTAACC TCTTACCAATCAAATTATCTACGTAATTAGTATTATCAGCTATCAATAAAATTAACCAGTTACAATTTGACTCAGCCACA AGCAGTGGTCAATGCAAACCCCATAATGGTTATTTAAATTTTCCTAAGTGGGGATATCAATTGTATACATATTTTTTTGA ACGTATCAATTGTATACATTAGTGATGTGCTGATTCCTATCAATTTGGCATGCCTTTATAAAGTAGACTTAAACTTGTTG TGCGCTTGTCTTAAACATGACAATTAGAAGACCAATTTTCCTTCATCTTCATTTGGTTTTTAAATAGCATAATTTTCTTC CAGAAGTTTGATAAGCCAAAATGAGTTTTAATTTTACTACCCTATCATATAATTATTTGTTAGCCAATCTAAAAAGAAAG CCCAGCAAAGCATAACAGTGGGGGAATACAAAACTAAAATTCATGAACTCATTTCACCATTTTGCTTCAACTGCTCCTTT TGCTATGGTTGCCGTTCTTATATAATAAAAACTACAAAATGATGCTATTCAAGACTTAAAAGGAAAAGTGCAAAAAATGT AATTGGAGTATTATTGAAGAATAAGCATTGCTTTAATAAATTTAGTCTATGACAGAAGTTTTGTTTTGTTAAATAATAAA CAACAACAATAACGAAAGCTTTATCCCCCCCCTAAGTGAGGTCGGCTATATGGATCATGCCATTGTGCTCAATAAAAACC AAATTTTGTAGAATATTATTGACCATGAGGTCACTTATAATGTAAGTGATAAATGTCCGAGTCCAAGATTTAAAGGGAAA ATAGGAAAAAAAGATGTAACTGGAGTATTATTGAAGATTAAAAATTGTTTTTAACTAATTTAATTCTATATTAAAAGTTG TCTTTGGAGTTAGAAGGGTTAGTTCCTGTAGATGAGTGGGTCTGAATCAGAGATAGAGTAATGGTGTAATATGGAATAAA TATTGGATTAGAATGTTGAGTATGGGTCTAGATGGACTGCAAGAGTTGAATAGTAACAACTCATATTGTTCAGATGATAA AAATTGATATATATGGCTAAAATAGAGATAAAGTGGCAGCGCCTAAACTCACGTCTCAGTTCTAGTAGTATCAAACTTGA AACCAAATGTACTGTTAATATATTATAAATAGATTTTAATACTGTCTAACTTGCTTTCAGGGGTGGGCAATGGAATTCAG GAGGACAGTGCCACAAAGAAACCGAGCCAATAATGAATGGAACTCACTTAAGGAAATACCCCTCGAAAATGAGGGCTTTA GACCATGTCATCCCAAAGATGAAAACCCCTGTAATATATATGAACATAAGTAGGATGACAGATTACAGGAAAGATGGACA TCCTTCTATATACAGAATGGAATACAAGACTGCTGCAGAACGCGCTTCTGCAGAGCTACACCAAGATTGTAGTCATTGGT GCTTGCCTGGAGTACCTGACACTTGGAATCAACTACTCTATGCTTCTCTGTTAAAACATGGTAAAGGCAATTGGAAAAGC TGAGCAAGACTCCTGAAAATGGTTCCATACCCCCTTTTCCAATTCTTTATATACATGTATATTCCTTTGTTTCCCAGTTT GGGGGTCCATCACAAAGGGTGTTGTTAGTATTGTGTATTGTGTGTATTTATTATCTACTTCTAAGTACAGTTGTCACAAT GAATACCACGAAAGCTGTAGAATTTGTTTATCATGAGCATAATTTAGTTCTTAGCCTTGGATTAGTTACAGAAAGTGAAG GATCAAACTTGGCAATTAGTGATTTCTTGTGATGGGAAGATAGATGATAGAAAACAGAATATGCTCTTTTAAAGCAAAAG GGCTCTCTAATTGGCTAACTTTATAAAGTGGCTATTTTCTGTTTTAACTTTTGAGTCTGCATTTTCTTGCCATTGCAATG GGCATTGGAAACGTGCAGATTAGGGTGTTAACACGAGATTGAGTGGTTGACACCTTTTTTTTTATCAATGGTTGATATTC CTTGCTAAGCCAATAAATGAGTAGAAACACAATTAAAATAGAGCTGCTACTAAGTTCAGTACCCTAACATCCCCATTACA TATGAAGCCTCTGAAAATGACTGTTTGGTTTGCATTTGCATAATGCAGACGTGAAAACACACATCCCATTGCGTCAACAC CAACGCATCAACGGAGAACTAAGACTGTCATTTTATCTCAAACATAAGGCAATGTTGAGTTTAATGAAAATCTAGACATA CACAAAATTAACATGCTTGCTATGGCGATTACACACAAACTATTTGGTTGTTAGATTCAACACTGAATTCAAAGGAGAAG AAACCAGAAAAGTGGCCTTGGTTATAGACCTCAGTCTGAGTAATTAATTCTTAAGGAGACATGATCCATTATGAACACTC AGATCCAACAGTTGATATCTGTAAATGTACTTTTAACATGAACAACACAAACCTTGAAAATTACTAAGCATTAATGGTAG GTAATTCCTAGTTTTATAATTCCATTTTACTTTTGCTGACATGAAACATTCGGTTTTTGGAATGCGTTTTGTATGAAGAG CATAAACTAGTTTAACATTGAGTCCCCTGAACAACTTTGAATGCTCAATCAACATTCAAAAGAGAATTCATGCTTTAGGA GAGGGATGAATTGGTGAAGGGTCAAGAGGCATGAAAATTAATTGCTCAATCAACATTCAAATAAGAATTCTGAAGCTTTT CTAAACAATACAATCCTAAGCTTTGAGAAACTAGAATCATACTATTCTTTTCTTATTCATAAGGTCATAACACAAAACAC AAACAAGATAACAGACACAAGAAGAGAAGGGACAGGAATGATAAGAGTCTACTTACCTACTCATCTGCAGAAACTGAAGC CAGAAACAGATTCTAGTAAGCTGCAAATTGAGTGATTTGGAACAGCACAAGTTGGTAACTTCTCAAGAGAAGACCATCTT TATGTTTATTACATTCTAAAATAAAGAACTATAGTTTAGAGTGAGATTTAGCCATTCGAACCCCTAATGGAGTCCATTGC CTTTTTGTGACTTGCCGGCTTGCCAGGCTGTAGCCAAAGTCTCTGCTCCTTTTGGAGAATGCTCATCTGCTTCTTCTGCT ACTCAGAGAGAATGTTTGAGCATACCTCCATGGTGATCACAGAAGCCAAAAGCTAAAGCCCAAACAAACTGTTGGAAGTG GAGGAGTGTGAGAGGTGACAGCACACTTTCACACTTCTCTTCATGCTTATTTAAGAACCATGGATGGAAATCTGCCAGCA GAGCTTCATGGTTACCAGATTCTGGATTTGATGGATTGGTTCAGAGGAGATTCCAAAGGGGATGAAAAGAAAGAAAACTA GTGGGGAAGTTAGTCTCTGACCATTGTTTTAAATAGTTGTTGGATGAGAACTAAGAAAGTGGTTTAATCTTTTTCATGAT CCAAATGCTTCTTACTTTTCATTTAAAAAGTCATCAAAAGTTGCAATGTAGGAACTCATGAAAGAAGACAGCAAAGTGTC CATTAAAATAATTAAACAGATGAAAACATTTATTTGATTTGCTCTATGTTTACCTTAACCTAATTGCCTTGGAAATCGAT TGGCTACCATCAGCGAGTTCCTACATTCATGTCATGTGGCAATTTAGTTGTTCGATCAAAGATCATTTGGCTCTGATTTT AGATTTATATCTACCGTTAGATCTTAAGAAAGTATATGAATCGACCGATCTTGACTGGACTGTTCA
CDS sequence (LotjaGi2g1v0322800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAGACAACTTCCATGTATCATGATGCTGATATAATAGTCTTCAATACAGGCCACTGGTGGACCCATGAGAAAAC ATCGAAGGGAGAAGACTATTATCAAGAAGGCAACCATGTCTACCCAAGACTCAAAGTTCTGGATGCATTTACTAGGGCAT TGACCACTTGGGCTAAGTGGATTGACGACAATATCAATGCCAATCGAACTCAGGTTTTCTTCAGAGGATACTCAGTTACC CATTTCAGGGGTGGGCAATGGAATTCAGGAGGACAGTGCCACAAAGAAACCGAGCCAATAATGAATGGAACTCACTTAAG GAAATACCCCTCGAAAATGAGGGCTTTAGACCATGTCATCCCAAAGATGAAAACCCCTGTAATATATATGAACATAAGTA GGATGACAGATTACAGGAAAGATGGACATCCTTCTATATACAGAATGGAATACAAGACTGCTGCAGAACGCGCTTCTGCA GAGCTACACCAAGATTGTAGTCATTGGTGCTTGCCTGGAGTACCTGACACTTGGAATCAACTACTCTATGCTTCTCTGTT AAAACATGGTAAAGGCAATTGGAAAAGCTGA
Protein sequence (LotjaGi2g1v0322800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQTTSMYHDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAFTRALTTWAKWIDDNINANRTQVFFRGYSVT HFRGGQWNSGGQCHKETEPIMNGTHLRKYPSKMRALDHVIPKMKTPVIYMNISRMTDYRKDGHPSIYRMEYKTAAERASA ELHQDCSHWCLPGVPDTWNQLLYASLLKHGKGNWKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 191 | 191 | 1.0E-124 | ||
| PANTHER | 1 | 191 | 191 | 1.0E-124 | ||
| Pfam | 4 | 184 | 181 | 4.1E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0322800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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