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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0324600 |
| Transcript ID | LotjaGi2g1v0324600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Armadillo repeat only protein; TAIR: AT3G26600.1 armadillo repeat only 4; Swiss-Prot: sp|A2RT91|ANKAR_MOUSE Ankyrin and armadillo repeat-containing protein; TrEMBL-Plants: tr|A0A0L9UAQ4|A0A0L9UAQ4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0324600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79942989..79946542) extracted from Lotus japonicus Gifu genome v1.2.
TATTATTCCAAAATTGATAAAAAGAAAAGAAAGAGGTTACTCCTGAATATGTTGTAGTAATAAGCATATGGAGGAGTTTC GGACAAACATGGCTGGCAGCAGAAACATAAGTAAGAGGAACAAAAACGCTCGCTCCGTTTCCCAACTCGGATCGCCTGTG ACTCACCGTAGACTCGTTTGACTCGCCTCCGCACAACACGCTCCGTTTCCCTCACTCCACCATCACTTTCTCTGACACGG CGGAGATGACGTCATCAGAGGAGAAGCAACTCGAGGAGGAGCTTTCGTACCCGATTCTGGTGGCGGAGCGAGTTCGCTCG GCGGTTGGGGAGGCCGACGCGTACAAGTTCGAGTGCAACGAAGTCTCCAAGCAAGTGGATCGCCTCCTCCAAATGCTCCG GACGCTGGTCCGTCTCGCTGCCTCGCCGTCGCTCTACGAGCGGCCCGTTCGGCGAGTAGCCGCCGAGACGTCGAAGAATC TGGAGCGCGCTCTGACGCTCGTTCGGAAGTGCCGGCGCCGGAGCATACTCCACCGTGTCGTGAGCATCGTCAGCGCCACC GAGTTCCGGAAGGTGCTCGGCCACCTCGAAGCCTCCGTCGGTGACATGCGGTGGCTTCTCAGCATCCTGGACAACGACGG CGGTGGCGGCGGGATTGTGGTGTCACTTCCTCCCATTGCGAGCAACGACCCTATTATGTCTTGGGTATGGTCTTTCATTG CTTCTCTTCAAATGGGTCAATTGAATGATAGAATTGATGCTGCGAATGAACTTGCTTCTCTTGCACAAGATAATGATAGG AACAAGAAGATCATTGTTGAGGAAGGTGGGGTGGCTCCCTTGTTGAAGCTTTTCAAGGAAGCCACTTCCCCTGAGGCTCA GATTGCGGCTGCTACTACTTTGTGCCGTTTAGGCAATGATTTGGAGAGGGTTAGAGTGATTGTGAGTGAGGTTGGTGTGC CTCTTGTTGTGCAGGTGCTTGGTGATTCTCCTATCAGGGTTCAAACCCTGTCTGCCAATTTGGTAGCTACCATGGCCAAG CATGACCCTGTTGCTCAGGAAGATTTCGCGAGGGAGAACGCGATTAGGCCCCTTGTCACGTTGTTGTCGTTTGATACTGC CATTGATGAGCAATCGGGTAAGCAGAGTATTCATTCTCTTGTTCAGATTAATAAGGAAATGGGAAAGAAGTCATCTGATA GGTCTGTTAGTAAGCAGTTTACGAGCTCGTACTCGAGTTCTTCGTATACCTACAGCCGGGGAGGGAACTATAGGAAAGAT AGGGAGAATGAGGATCCTCAGGTGAAGCTTCAGCTCAGAATTAGCTGTGCTGAGGCTTTGTGGATGCTGGCGAGAGGAAG TGTGTCCAACAGTAGGAAGATTACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTATTGAGAAGGAACAAGGAGAGC TTCAGTTTAATTGCTTGATGACGATAATGGAGATAGCAGCTGCAGCTGAGTCCAATGCTGACCTTCGGCGTGCTGCATTT AAGACTAACTCCCCTGCTGCCAAAGCTGTTGTGGAACAGCTCTTGAGGATAATTAAGGAGGTGGACAGCCCTTCATTGCA AATTCCAGCAATAAAGTCCATTGGTTCATTAGCTAGGACATTTCCTGCTAGAGAGACTCGAATGATTGAACCTCTAGTAA TGAAGCTGAGTAATAGAGACACAGATGTAGCAGATGAAGCAGCCGTTGCTCTTACCAAGTTTGCTTCTCCAGATAATTTC TTATATGTGGAGCATTCCAAGACAATAGTTGAATACAATGGTGTTCCTGCACTGATGAGACTGCTAAGGAGTAACGAAGT TAACCAGTTACATTTGGATCATGGGCTAACTCTCCTTTGCTTCTTGGCACTGCATGCCGGCAACAGTGAGTCCTTAGAAC AAGCAAGGGTGTTGACGGTTCTTGAGGGCGCAGATAGAACAGCCGTTCCGCCGCATCTAAGAGAATTGGTGTCCAGGACA ATATACCACCTCAATTTGTACCATACAGGAATGAATTCTCAAAGGATATCATCATATTTGCCTTGAGCACAAATTCAGCT ATTTTCTGGACCCTGTATTTTTGTGGGTTGATCAGTATACTGTTGGTAGTTGCTTCTGGTCGACTCTTCTGGGAATAAGG TGTTTATCATTGAAACAAAGCATATACTTGAGAAAATATATTAGTTTTTCAGCTTAGGCAGTTTTTTCTTTATTTCCCTC ATGAAACTAGTTACTAGTTAATGGGGTGGTGGTTGTGCAGTATTAATTTATATTGGATTATTAGCTCTTCTTAGTCATTT GGATTTGTGTTCTTTGTGTTTACTTATTTTGCTCATCAAATATGTTCTCGACACTGCATTTTGATAGTGTAAGTTCTTAC AGTAAAGTATAATTTTATGAGGTTTGATCCCCATATAATGTATAGTGACTTTGCCATTGGAAGTCTCTATACCAGTTTAC CTCTGAACTCATGTCTTGATCAGTTGATCAATGATCAACACATCAACTTTTTTATTTTGATAACTGAGATGTGTTTTGTT CGTCAGTCTTCAACATTTCTACAGAAAGTAACTAGGTTTTTAAGGTAGCTCGTTAGAGCAATGAAGTTGATCATGGGTAA GCATCATTATGTTATTATGTATGCTTCTTATATGGAAACAGGAATCCGTCATTACCTTCTATATCCTTGTGTAGAATGGT GCTATAGCTCATCTTTGCTTTCTACAGAGTGAAGAAGGCCAGATATGACGGTGTTAATTTGCAGAAGGCCTGGATTTTCT GCGGGTTAGTTTTCATGAGATGTGCTATATTTATCATATTATGAGACAGGTATACGATTTTGAAAAATGCTAACAACACA TTCTTCATTATTAGGTGAAATTTATGTGAGTCCCACCAATTAAGGATTGTGTGCTACCAAATATGAAGTAAAAGCCAAGT GATTAAGTGACCTCCACTCTAATTTCACGAAATAATATAGTGTGATGAAAGAATTTGTTGCTAGCCTTACTCTACAATTT AGTTGTGCCTATCTAAAACTAGCTGTGAAGGAATCATTTGCAAAATGTTCTGCTTGGTAATGTGTTTTCACTTTTTCAGT TCATTCCACATCTCAATATAATTGTGGTATGTTGCATCACAGTCTACAATATTTGTCTTCATTGGGTCTCTTCCTGCTTC CCTGATTCGTAAACACGTGATGTTGATCTTGTGGACCCTTGTATTCCTCCAGAAAGAGCATGTGACTATCAAAGAAGGAG TGTTGAGCTAATCGTTATGGATGTTTGTGACTTGTTTACAGTGCTCTTTGTCATTTAGCAAAGTGATTATGTGATGTTAT GTTGTCTTTTTATCATGTATAAAGCTTCAAACTGAAGGAACTTGTCTGTATGTACAAGCCAGATAGATCATAACCCACAT GTAAGAAGTTGCAGGATATGTTACTTCAGAGAGGGCGAATGAACATGGCAAAGAATTCCCATTTCCCAAGGTTTTTTACT TTTTTTAACCGGTTCTGAGAGAGGAGCCTCTTTG
CDS sequence (LotjaGi2g1v0324600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGTCATCAGAGGAGAAGCAACTCGAGGAGGAGCTTTCGTACCCGATTCTGGTGGCGGAGCGAGTTCGCTCGGCGGT TGGGGAGGCCGACGCGTACAAGTTCGAGTGCAACGAAGTCTCCAAGCAAGTGGATCGCCTCCTCCAAATGCTCCGGACGC TGGTCCGTCTCGCTGCCTCGCCGTCGCTCTACGAGCGGCCCGTTCGGCGAGTAGCCGCCGAGACGTCGAAGAATCTGGAG CGCGCTCTGACGCTCGTTCGGAAGTGCCGGCGCCGGAGCATACTCCACCGTGTCGTGAGCATCGTCAGCGCCACCGAGTT CCGGAAGGTGCTCGGCCACCTCGAAGCCTCCGTCGGTGACATGCGGTGGCTTCTCAGCATCCTGGACAACGACGGCGGTG GCGGCGGGATTGTGGTGTCACTTCCTCCCATTGCGAGCAACGACCCTATTATGTCTTGGGTATGGTCTTTCATTGCTTCT CTTCAAATGGGTCAATTGAATGATAGAATTGATGCTGCGAATGAACTTGCTTCTCTTGCACAAGATAATGATAGGAACAA GAAGATCATTGTTGAGGAAGGTGGGGTGGCTCCCTTGTTGAAGCTTTTCAAGGAAGCCACTTCCCCTGAGGCTCAGATTG CGGCTGCTACTACTTTGTGCCGTTTAGGCAATGATTTGGAGAGGGTTAGAGTGATTGTGAGTGAGGTTGGTGTGCCTCTT GTTGTGCAGGTGCTTGGTGATTCTCCTATCAGGGTTCAAACCCTGTCTGCCAATTTGGTAGCTACCATGGCCAAGCATGA CCCTGTTGCTCAGGAAGATTTCGCGAGGGAGAACGCGATTAGGCCCCTTGTCACGTTGTTGTCGTTTGATACTGCCATTG ATGAGCAATCGGGTAAGCAGAGTATTCATTCTCTTGTTCAGATTAATAAGGAAATGGGAAAGAAGTCATCTGATAGGTCT GTTAGTAAGCAGTTTACGAGCTCGTACTCGAGTTCTTCGTATACCTACAGCCGGGGAGGGAACTATAGGAAAGATAGGGA GAATGAGGATCCTCAGGTGAAGCTTCAGCTCAGAATTAGCTGTGCTGAGGCTTTGTGGATGCTGGCGAGAGGAAGTGTGT CCAACAGTAGGAAGATTACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTATTGAGAAGGAACAAGGAGAGCTTCAG TTTAATTGCTTGATGACGATAATGGAGATAGCAGCTGCAGCTGAGTCCAATGCTGACCTTCGGCGTGCTGCATTTAAGAC TAACTCCCCTGCTGCCAAAGCTGTTGTGGAACAGCTCTTGAGGATAATTAAGGAGGTGGACAGCCCTTCATTGCAAATTC CAGCAATAAAGTCCATTGGTTCATTAGCTAGGACATTTCCTGCTAGAGAGACTCGAATGATTGAACCTCTAGTAATGAAG CTGAGTAATAGAGACACAGATGTAGCAGATGAAGCAGCCGTTGCTCTTACCAAGTTTGCTTCTCCAGATAATTTCTTATA TGTGGAGCATTCCAAGACAATAGTTGAATACAATGGTGTTCCTGCACTGATGAGACTGCTAAGGAGTAACGAAGTTAACC AGTTACATTTGGATCATGGGCTAACTCTCCTTTGCTTCTTGGCACTGCATGCCGGCAACAGTGAGTCCTTAGAACAAGCA AGGGTGTTGACGGTTCTTGAGGGCGCAGATAGAACAGCCGTTCCGCCGCATCTAAGAGAATTGGTGTCCAGGACAATATA CCACCTCAATTTGTACCATACAGGAATGAATTCTCAAAGGATATCATCATATTTGCCTTGA
Protein sequence (LotjaGi2g1v0324600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSSEEKQLEEELSYPILVAERVRSAVGEADAYKFECNEVSKQVDRLLQMLRTLVRLAASPSLYERPVRRVAAETSKNLE RALTLVRKCRRRSILHRVVSIVSATEFRKVLGHLEASVGDMRWLLSILDNDGGGGGIVVSLPPIASNDPIMSWVWSFIAS LQMGQLNDRIDAANELASLAQDNDRNKKIIVEEGGVAPLLKLFKEATSPEAQIAAATTLCRLGNDLERVRVIVSEVGVPL VVQVLGDSPIRVQTLSANLVATMAKHDPVAQEDFARENAIRPLVTLLSFDTAIDEQSGKQSIHSLVQINKEMGKKSSDRS VSKQFTSSYSSSSYTYSRGGNYRKDRENEDPQVKLQLRISCAEALWMLARGSVSNSRKITETKGMLCLAKIIEKEQGELQ FNCLMTIMEIAAAAESNADLRRAAFKTNSPAAKAVVEQLLRIIKEVDSPSLQIPAIKSIGSLARTFPARETRMIEPLVMK LSNRDTDVADEAAVALTKFASPDNFLYVEHSKTIVEYNGVPALMRLLRSNEVNQLHLDHGLTLLCFLALHAGNSESLEQA RVLTVLEGADRTAVPPHLRELVSRTIYHLNLYHTGMNSQRISSYLP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 601 | 598 | 1.8E-271 | – | |
| PANTHER | 4 | 601 | 598 | 1.8E-271 | – | |
| Coils | 163 | 183 | 21 | - | – | |
| SUPERFAMILY | 164 | 571 | 408 | 8.64E-38 | ||
| SMART | 182 | 224 | 43 | 0.003 | ||
| Pfam | 183 | 222 | 40 | 1.3E-4 | ||
| MobiDBLite | 330 | 349 | 20 | - | – | |
| SMART | 507 | 549 | 43 | 130.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0324600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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