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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0335800 |
| Transcript ID | LotjaGi2g1v0335800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid-lipid-Associated Protein; TAIR: AT2G35490.1 Plastid-lipid associated protein PAP / fibrillin family protein; Swiss-Prot: sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic; TrEMBL-Plants: tr|I1J4S3|I1J4S3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0335800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81171620..81175797) extracted from Lotus japonicus Gifu genome v1.2.
GCAAAAATGCTGTTTTTTTAGTACCACTGAAAAGGTAGCTCAGATTCTTTGTTCCAGCGTCGCCACCATTCGAATTCCGA TGGCTCTACTTTCCTCCGCCACACACCGCATCCCTTTCATCTTCTCCCAAAACCCTAATCCTAAACCCTTTTCTGTCTCC TCTCTTCATTTTCAATCTTCTCTTTCTCCCAACCCTCTCAGATTCCCTTCTATTCGCTTCATCGCCCCCGCCGCCGGCGA CGCCGACAAGGCATCCGCTGACATCTCCGATGAGTGGGGCGAAAGCTCCGAGCCTGAGCCCGAAGCATCGTCTGCCCCCA AGCTTCCTGATGTGGACCCTCCCAAGGATGAGGACGAATGGGGAGGAGTAGCAGCAGGAGCAGACACCGGCGGTGGCTAC GTTGACGCCGGTAATGGAACTCCAGCTACTCCTACCGAAGCTCCGGCGGAGGATGGAGTGGATGGTAACCTCTATGGGCT GAAGCGGGCTCTGGTAGACACTGTGTTCGGGACTGAGCTCGGGTTTCGAGCTGGGTCGGAGGTTCGAGCTGAGGTGTCTG AGTTGGTGACTCAGTTGGAAGCGGCGAACCCCACACTGGCACCGGTGGAGGAGCCTGCCCTTCTCAATGGAAATTGGGTT TTGCTGTAAGTCTGAATGCGTTTTGCAAATTGTGAATTTTTTTTTTTTGCTTATAGTATCATAACATGAATATCTCTGAT TTTGTAAATCATTTTATTTTCACATGAATTGATTTTCCAACTAAACTTAAGAGTATAGTTGAAGTGTGACACTTTGATTG ACATCGTAGCTAAGAATTGTTGTATAAATGAATGGAGAGGTCAAGAATTAATGGTAAGATGGTTCTGTCTGTTTGAGTCT TCCCTGCTAGATTAGCCAAATTGCTTGTTTCTGAGCTCATATTGGTTTACTCTGTCAAAAACAAGTATAGTCGTTGGTAT TGATGCATAACTCAAAAGGTTTTGGGTGTTATTCTTAATCGAAATCCTTACTGTTTCTTGGTCTATCAAACTGATGACAG GTACACCGCATCTTCTGAACTGCTGCCTCTTCTAGCAGCAGGAGCATTACCTTTGGTGAAGGTAGACAAGATTTTGCAAA CAATTGATACTAGCAGCGCAACTATTATAAACTCTATTACGTTGTCTAGCCCTTTTGCCTCTCTCTCTTTTAGCGCATCT GCCTCATTTGAAGCTCGAAGCCCAACAAGAATACAGGTATTTCTCATGAAAACTTTTGTATTTTGCTGATTCAAATTTTA AATAGGCAAAAGGTTTGCAGGGTTTAGACCAAAGACATAAAAAGAGTGTAAACCTCATTGTTGAAAGTTTTTTATCGCAA AAAATGCATACCTCAACTGAAATCTTTGTCAGCTAAATGGATCAAATAACAGTGTATTGTTCTATCATAAATTTTATGTA AGAGTAAAATATTTGACTATATTGCATTGATTTTCCTTTTGAATTCATGGCTGTAAAATTCCTGAGTCTGTAAATTTTGT GGAGAATTCGTAAACTTAACTCGTGGGCCTGACTCATAAACTTATCATCACAAGCAAAGAGAATACAATACCACTAACAT GACAAATATTAAACACCAACGTAGTCAAAATTGAGATCCTATGTAAGATTAGGAGGGGAGTGAAAATTGTAAATTGTGGG ATCACAACACGGGTTGTAAGATCCTTCAAAATTCTTATAAATGCATATAAAATAGAATAAATAAGAAGTAGGACCCCTGA GTCACAAAACTTGGATAGACTCGCATAAATAACACAATCCATAATAATGTCATACGTAAAGCACCAACAGTAGCTTAAAA ACTTCAAATAGGAAACATTTGACAAGGCATAAAACATAAATCCCCTTACTGGTTGAACCTTCATCAGGATTCTTAGCATT CTCTCCTATCACATTTCCAGCTCTCCCGGTGGAAAACCATGCTTGCCCAAGCTTACCACTGTCTGAGCAAACTTTTCCTG ACTTTCCTTTAAATCCCCTTGCCCTCCCATAGCTTCCCCCCTCCCCCCCTCCTGCTGTGCTTGTCACCACCTCTATGTCT TTTGTGAATTGACCTGGACTTTGTCTCTCATGTTGAAGTACCAGTGAAAACCACCGATTAATATTTGGAAGAGGTTCCAT AATCAAAGTCTGAGATTTCACTACACTAAAGTTTTCATCCTGACCTGTAAGAAAACCTATGATATTATCCTGCTCCCTAT ATAGCATTTCTCGCAGCATCACGAATACATTGAACTTCACAGTTAGATGATGGCCTGTAGTTTTCAAGTTCTTCTAAAAG AACTAGATCAGTGTAATAATCTGTCGCTGAAAGATTGACTTGCTTGAAGTCTTGATGTAACTCTGAAATGCTGATCAAAT CTCCTTGACAGAACCGCTCCTTCGAATCTTTCCATACTTCTAAACATTCTCCATGTAGACTATACTTTGGGCTATTGATG GACTGACATAGTGAATGATTCATGAGTGCACAAGGTTGTTGCACCTTTCATCCAAACTCCGGATCCAAACACCTTTGGAA GGGGAGAGGAAATGCTCTATGTGGACATCGCAGGGCAAGGCCAGAGGTGGTGACACCCGAATGTTACATTAACAAGTTTG ACAACCATGTTTAAATTTCTTGCAAAGGCAGTCATGCATAACATTCATTGCAAAAGCCTTACGTTGGCTGCTGTGACAAA TAGTTTTCCCTATTTGTGTCAGACTTGGCAAGTTAGATGGCTGGTCCTCTTGGGTTTTGTTTTTTCAATTATCATTAAGT GTTTAAGGGCATGCCTTAAATCACCTATTCTACCCCCAAATAAAAGCACTGCACTTTTATTATGCTTGCCATATTTCATG TATAGTATATGCTGGTAATTCCAAGAGTTCATCCTATTGCATTTGTAATTGAGTAGTTAAATGAAAAGGTTGCTATTGTT GAGTTTATCCTGTTGCATTTGTACCAATTATGCACTTTTGGATGACTAGAAAACTGTTGCTTTAACATTTCTAACTGAAA GCAGGTCACATTTAAAGAAGGTTCGTTCCAACCTCCGGAGATTAAGTCTAAAACTGAACTGCCCGGAAGCATAGATGTTT TTGGCCAAAGGATTAGCTTACTGCCTCTGCAACAAACCCTTGATCCTCTTCAGGGTGTGGTGGCAAACATATCACGTGTC ATTTCTGGTCAGCCACCTCTTAAGATTCCCATTCCTGGCGAGAGGACAAGCTCCTGGCTTATTACTACATATCTTGATGA GGACTTGAGAATATCGAAGGGAGATGGCGGTCTTTTTGTCCTTGCCAGAGAAGGCAGTCCCCTTCTCGATCAGTAGGAAA GTATACTCTTATTATTCCTTTCATCTCCCTCCACTCCATTCCTGCCCCTCTGAAAATAATGTGAAAGGTATATTCAAGAT GTCTCATCTGCTTTCTTTCTTCTTTTTTATTCATCTCAAGCTGTTGTATATTAATAGGGCACTTGCTTCTGTTATCAGGA TGTAGTTCAATAAATAGTTGTTGGAGATACGCTCAGTCCCCTGTCAACTTTGTTGGGGGACATATGATAATTTAATGAAA CTACTTTTGAGATGATAAAACTTATATGTTATCTCAGCATGCGCGTGATCTGGATTTTAATCCTGGGCTACAGGGCCTTC CTTGTTTCGAAATGCCTATTGTTCATAACATTTGAAGTTTGTTGGCTTACCGAAACACGCGAAGTTACTAAGCTGTGCAT CGTTATTGACCATTTTAGTAATAATAATTCATTCTTCTGTCCTCTAAAAAATTAGGGGGTTGTGTTTTTAAAGATTTTTA TCTCTTCTAAAGAAATAGTGTTGTCATATGTGATTGTGTTATTCCCTTAGATAGATGAATTAAGTGGTGATTATTTGTTG TGGATTATTTTGGTTTAGAATTATGTAGTCATATTCTACATTTCTAATCGATGAGATGCTGATTTGCTGATAAAAAGTTA GAGGACTAATATGGTTGGCATTTAGTCTTTGGAAAACTGAGTTAGAGTTTTGTTGGAATTGAAATTTTCGTCATCACTCG ATCAATAAGGTTCTGTTGGAATTGAAATCTTCTATACCCCGAAATTTTGTTTCATTCCTCATCTCACTAATAAAATTTTG ATGTCATTTAAAAATCTC
CDS sequence (LotjaGi2g1v0335800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTACTTTCCTCCGCCACACACCGCATCCCTTTCATCTTCTCCCAAAACCCTAATCCTAAACCCTTTTCTGTCTC CTCTCTTCATTTTCAATCTTCTCTTTCTCCCAACCCTCTCAGATTCCCTTCTATTCGCTTCATCGCCCCCGCCGCCGGCG ACGCCGACAAGGCATCCGCTGACATCTCCGATGAGTGGGGCGAAAGCTCCGAGCCTGAGCCCGAAGCATCGTCTGCCCCC AAGCTTCCTGATGTGGACCCTCCCAAGGATGAGGACGAATGGGGAGGAGTAGCAGCAGGAGCAGACACCGGCGGTGGCTA CGTTGACGCCGGTAATGGAACTCCAGCTACTCCTACCGAAGCTCCGGCGGAGGATGGAGTGGATGGTAACCTCTATGGGC TGAAGCGGGCTCTGGTAGACACTGTGTTCGGGACTGAGCTCGGGTTTCGAGCTGGGTCGGAGGTTCGAGCTGAGGTGTCT GAGTTGGTGACTCAGTTGGAAGCGGCGAACCCCACACTGGCACCGGTGGAGGAGCCTGCCCTTCTCAATGGAAATTGGGT TTTGCTGTACACCGCATCTTCTGAACTGCTGCCTCTTCTAGCAGCAGGAGCATTACCTTTGGTGAAGGTAGACAAGATTT TGCAAACAATTGATACTAGCAGCGCAACTATTATAAACTCTATTACGTTGTCTAGCCCTTTTGCCTCTCTCTCTTTTAGC GCATCTGCCTCATTTGAAGCTCGAAGCCCAACAAGAATACAGGTCACATTTAAAGAAGGTTCGTTCCAACCTCCGGAGAT TAAGTCTAAAACTGAACTGCCCGGAAGCATAGATGTTTTTGGCCAAAGGATTAGCTTACTGCCTCTGCAACAAACCCTTG ATCCTCTTCAGGGTGTGGTGGCAAACATATCACGTGTCATTTCTGGTCAGCCACCTCTTAAGATTCCCATTCCTGGCGAG AGGACAAGCTCCTGGCTTATTACTACATATCTTGATGAGGACTTGAGAATATCGAAGGGAGATGGCGGTCTTTTTGTCCT TGCCAGAGAAGGCAGTCCCCTTCTCGATCAGTAG
Protein sequence (LotjaGi2g1v0335800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLSSATHRIPFIFSQNPNPKPFSVSSLHFQSSLSPNPLRFPSIRFIAPAAGDADKASADISDEWGESSEPEPEASSAP KLPDVDPPKDEDEWGGVAAGADTGGGYVDAGNGTPATPTEAPAEDGVDGNLYGLKRALVDTVFGTELGFRAGSEVRAEVS ELVTQLEAANPTLAPVEEPALLNGNWVLLYTASSELLPLLAAGALPLVKVDKILQTIDTSSATIINSITLSSPFASLSFS ASASFEARSPTRIQVTFKEGSFQPPEIKSKTELPGSIDVFGQRISLLPLQQTLDPLQGVVANISRVISGQPPLKIPIPGE RTSSWLITTYLDEDLRISKGDGGLFVLAREGSPLLDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 40 | 356 | 317 | 1.8E-148 | – | |
| PANTHER | 40 | 356 | 317 | 1.8E-148 | ||
| MobiDBLite | 53 | 127 | 75 | - | – | |
| Pfam | 134 | 348 | 215 | 7.4E-70 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0335800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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