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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0336000 |
| Transcript ID | LotjaGi2g1v0336000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Poly [ADP]-ribose] polymerase; TAIR: AT1G32230.1 WWE protein-protein interaction domain protein family; Swiss-Prot: sp|Q8RY59|RCD1_ARATH Inactive poly [ADP]-ribose] polymerase RCD1; TrEMBL-Plants: tr|I1J4R8|I1J4R8_SOYBN Radical-induced cell death protein; Found in the gene: LotjaGi2g1v0336000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81246667..81251218) extracted from Lotus japonicus Gifu genome v1.2.
TAAGAATCTGATGAAAAGTGAGTCACGCCACATCATCTGTCTGGCCTGGGCTTGCTTGGAAAAGAGGTACTAGGGAGGAT TAACAGACTCCATCAACATCTTCCTTTTAAAACACCCTCCATCAATTATCTTCCATTTCAGGCTCGGTGCTTCCTTATCT ATTGATTTGCGACGTCCGCTTCTCACAAATTTTCTTATAAATAGGACCTTCACTCTCCCTTGATGCATAGCTTCAAAGTA GTTTCTGAAAGAGAGATAATAAGTGGTGTCTAGCTAGCTTGTCAAGGTTTATTATGTGTGTTCAGTGTTTCGAGGCAGCT CAGGTATAATTCGGAAGCCTTCTCAAGATTTTCATTCCATGCTTTTTCCATTTCAGCATTTGAGTGATTTTCGGTGTTTT GTAAAAATTTCATGTATATTTCATTTTTCAATTTGAGGCTTGAGTTCACCAAATGTGAGTCATTTTCTGATGTTTCTCTT TTGTTTGAATGTTTTTTTGACATTTCATCCATGCCGATTTAGCTATTGAAAGCGATGTTGATACAAAATTACAAAGTGTG TGTATATAGTGTGTTTCAATTTTTAAGGGTATCTTTGGCTTAGGTTGGGCAGCGCTATAATATGATTTTTAAATAAAAAA TTACAAAATGCTCATAATAACGATGACTTTCTCGTAATCATTTCTTTCCATCTTACTAGTAGGTTATGGGCGTTGTTATT TTCTTGGGAGGTAGCTCACTTGGTTGAGCTGAGGGTAGAAATAGGTATTGAAGATTGAGGTTCAGGGTTCGAACTCTGAG GATAAGCATTTATAATTACTAACCACTAACATTTATCTATAAAACAAACATAAACACAATAAGTTTTGCGGTGTAAAGGG GATTAGTACTCATTTATAAAAAAAAAAAAATCCAAATGACTACGTTAAAAAAAATCAGTTTTAAAATATATTATATGTGT TTTTTTATTCCAAGAAAAATTTCATTGCTTTCTCATCATTTATATTATATTTTATCCAATCCACATCAAATATGACCAAA CGGTACAACTTGGATGCTATTAACTACTTAAATATTTAATAAGTTACACATCATGTTTTTTCAACCCTTTCTAGAGATGG TGTTTTTGCAATATTTTATCTATGCAAGTGTTTCAGATTACTTGTTTTGTCATACAGGAATCAGGAGTACATTTTATTTA TTAACTTCTTTTATTATCTATTATGTCAAAATTATACACGACCTTATAAGGTTTTATTTGGCTTACATATGAGTTTTTTA TATTTGTGTTTTACAGATACTCATCTAATATATTGAAAGGGAAGCTAGAGCTAAACTTACGCAAAAGTAGGTTGTTGGTT GTGTTGCACATCTAAAGCGAACTTCGCGACTAATGATTTATCAACAACCATCACTCGCACCGCCCACAGGCAGAGTTATC AAAAAAAATGAGATTGAAATATTATGAAAGAAAAAGGTCAATTGTTTGTCCTCATAGTGGACAATCATTTCATAGGTATT ATTTAAACTATAGGAAGAGTGAAAGACCAGAACGCGTGATGTTGTACAATTATAGTGAATGGTTGGATTACTCTAAAGAT GTTGTTAACTTGGTTAAGAATGATTTTGACATAAAAAAGGCAGCTGTGGAAATAAGGTTAAATGGTTGTGAACTTATGCT AGATTTTTTACACAAGTGTCAGGTAGACTTAAAAACTAGTTTGCGACAGCCCATAGCATGGATTAATGAGGTAGGGGGAT GTTTTTTCCCTGAAGATTATGCTTCTTATGATGGCAAATCATACAAATGTGAACATGAGGGTATGAAAATATGTATTGAA ATCAAAGCGAACGGGGTTGTTGAATCTAAGTTGAGGAAATGTAAAGGGGAGTCCAATGCGATAGTTAAGGATACTCCAAT AGAATTTGAAAATAGGATGATCAAGTTGGATTGTGGAAATGGTGGTGAACCTATCTTGCAGAATAAAGTAGGTTTAGCTC CTTACACTAAATCTATACAAGGAAATTTGGATTTGGATTATGTACAAAAAATGTTCCTTGATGGAATGAGTAGTTTTGGA AATACTGATTTAGAGATAGTGGAGGCATACCGTTGCTCAGGGGCATCAATGCAAGCACGGTTGGAGTTGTTCCGGACTCA AGCTAAAATTACAAAAGAATTCCATGGGGATGCTAATGTTCGATATGCTTGGCTTCCATTTTTAAAAGGAGAATTATCTA CAATGGTGGGGTATGGACTTGGGCATTGCGCACTATGTGCAAGCAAATACGCATATGGCGTTGGTGTTCAACTTGCAGCT GTTACTTGCCCTTATGCTAGGTTAGCTTTCTTATGATCAACTTTGAGATATAACATATTTTACATACTAACAATAAGATT CATTTTTTCTATATCTACAGTGCTCGCTATTGTGATATTGATGAAAATGGTGTTCGACACTTAATCCTTTGTCGCTTAAT AATGGGGAACATGGAAATTCTTCGTCCTAGCATTAACACCAACACTGGTCAATTTCAACCTAGCAACTCTAAATATGATA ATGGAGTGGATGACATCCAATGCCCAAGATACTATATAATATGGAATGTGAATATAAACACTCACATCTATCCCGAATTT GTTATTAGTTTCAAGGTTTCTAGGGATGTTGAAGGTAATTTACATCGTACCTTCAATTTTTTTGTATGTGTTTGCAATTG ACATATGTTTAAGTTGTACATTTTGATATTGTACTCTGTGTTTTGATTAAAGGTAAACTAATTGATATTTATAATTCATT ATTTCTATTTAGATGAAAAAGTTCTACAAAAATTTTGTATTTGGAAATAGGGTGTCATCCATAAGTTGTAACTCTTGTGG TTGAACTTTCTTATATTCAAGAATTGATGGTTTCATTATGCACCTTCTAAGCTATATAATGTTATTCCTTTTTAGAAAAG GATTCTTCTTGATCACTAATACATGGTGTTTTGTTACAGGTCATTTTTGTGGAAATGTGGGAGAGATTAATGACTTTGGT ACTAATTATTCTGGGGACAACTTGGCTAGTGACCTATTACAGGTAGCCTCTTCGGTAGATAATGTAAGTTAATTGATTTT TTTTTTTGCATAAGCCATATTGATAAGTTAATAAAAGGCACAAGGGTGCCACCTATGGTACAAAGAAAGAAATGAGATAA GTGAAAGTAAAACAAAAGCCACAAACAGAAGAGTGGTACAAAAACAGAGGAAACAGGGGAAAAACTATATAGGATCAGCT TTAAACTAAAGCCTCCTAAAGCACCCCTTCATGTTTCGTAAATTACTTAATATGAGTTTTCGATCTTTTGTTTTTCCAAG CTTTATATCTTAAAGGCGATGTTAATATAAATTTTTAACTAATGTTTCATTAAAGAAAGCTTTCACATTTTCACCTTGTA TATAAATGTACCCAATTATAGACATATTCATTTAGCTTCAATGCCTATTTGAATAATTTTTTATGGTGGAATACCTCAGG GAATAGTTGCTAATACCCCAAAAATTCCGAAATCCCCTTGGCTGCCTTTTTCTATGCTTGTTGTTGCTATCAATGATAAG GTTGCTCCTAGTGATATGAGTCTTAATGCACATTATAAACTATACAAGGTATGTACAATAGCTACAAATCTTCCATGTTT ATCTTCATTGATGAAAGAAATGTCTCTAATATATCAGTCGTTCTTGTTCAGACAAAGCAAATTTCCCGTGATGGTTTCGT GAAGGAGCTGCGGTTGATAGTTGGAGATACTCTGCTAAGAGCTACAATAACAAGTCTTCAATTTCGGGTACAAAATTTCT TTTCTTTTTCCATAAATAATTTGAATAAGAATTATTGTGCTTGTGCATTGTCTTCTCCTGCAGTTATACCTTTCACGCGA AATACTAGTTAATTATAATAGGCCATAAGTTTCATTTCTTTAAGAAATAAATTGTGATATCTTATTTGCAGTCTTCTATT ATGGGGTTATGCCTCTTAAATATGTTTAACTGATTTCTTCCAGATACCATCAAAAGGTGAATTGGAAGACTCAAACCAGA ACGAAGGTTAAGACTATAGCTATCTATGAGGAGCCGAAGAACTATTGTCGACTTTTTATTTAATAGTTAAAATTAAGTTT TGATATTGTTTGCTCTTAAAAAAACAGTTTTCCATTACTTTTTGTCATTTATTTCTACCTAGAACTTAAGTAGAATTTGT TTTACGTATCTCATATGTTAGACTTTTTATAATAAAATCCGTTTGTGGTTTTAATTATCTTAAAAAATGAGCGCATTTCC ACTGAACTTTGCAGGATGTATGTTGAAATTCGTATATATATGAAGGCCTCCAACATGAATTTCTATAGTGCCACTAAGGC ATTGTTCACACTATCTTCGATGGAATAAATATACTCGATGTTGGTGTGAAACATCCAAAGAAGCTATGGACTTCAATCAT CAAATTAAAAAAAATGAAACTAAAGGAGTAAAGGACATTTACGAAAAACTTGATGATGTTGCTATACTTTGC
CDS sequence (LotjaGi2g1v0336000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATTGAAATATTATGAAAGAAAAAGGTCAATTGTTTGTCCTCATAGTGGACAATCATTTCATAGGTATTATTTAAA CTATAGGAAGAGTGAAAGACCAGAACGCGTGATGTTGTACAATTATAGTGAATGGTTGGATTACTCTAAAGATGTTGTTA ACTTGGTTAAGAATGATTTTGACATAAAAAAGGCAGCTGTGGAAATAAGGTTAAATGGTTGTGAACTTATGCTAGATTTT TTACACAAGTGTCAGGTAGACTTAAAAACTAGTTTGCGACAGCCCATAGCATGGATTAATGAGGTAGGGGGATGTTTTTT CCCTGAAGATTATGCTTCTTATGATGGCAAATCATACAAATGTGAACATGAGGGTATGAAAATATGTATTGAAATCAAAG CGAACGGGGTTGTTGAATCTAAGTTGAGGAAATGTAAAGGGGAGTCCAATGCGATAGTTAAGGATACTCCAATAGAATTT GAAAATAGGATGATCAAGTTGGATTGTGGAAATGGTGGTGAACCTATCTTGCAGAATAAAGTAGGTTTAGCTCCTTACAC TAAATCTATACAAGGAAATTTGGATTTGGATTATGTACAAAAAATGTTCCTTGATGGAATGAGTAGTTTTGGAAATACTG ATTTAGAGATAGTGGAGGCATACCGTTGCTCAGGGGCATCAATGCAAGCACGGTTGGAGTTGTTCCGGACTCAAGCTAAA ATTACAAAAGAATTCCATGGGGATGCTAATGTTCGATATGCTTGGCTTCCATTTTTAAAAGGAGAATTATCTACAATGGT GGGGTATGGACTTGGGCATTGCGCACTATGTGCAAGCAAATACGCATATGGCGTTGGTGTTCAACTTGCAGCTGTTACTT GCCCTTATGCTAGTGCTCGCTATTGTGATATTGATGAAAATGGTGTTCGACACTTAATCCTTTGTCGCTTAATAATGGGG AACATGGAAATTCTTCGTCCTAGCATTAACACCAACACTGGTCAATTTCAACCTAGCAACTCTAAATATGATAATGGAGT GGATGACATCCAATGCCCAAGATACTATATAATATGGAATGTGAATATAAACACTCACATCTATCCCGAATTTGTTATTA GTTTCAAGGTTTCTAGGGATGTTGAAGGTCATTTTTGTGGAAATGTGGGAGAGATTAATGACTTTGGTACTAATTATTCT GGGGACAACTTGGCTAGTGACCTATTACAGGTAGCCTCTTCGGTAGATAATGGAATAGTTGCTAATACCCCAAAAATTCC GAAATCCCCTTGGCTGCCTTTTTCTATGCTTGTTGTTGCTATCAATGATAAGGTTGCTCCTAGTGATATGAGTCTTAATG CACATTATAAACTATACAAGACAAAGCAAATTTCCCGTGATGGTTTCGTGAAGGAGCTGCGGTTGATAGTTGGAGATACT CTGCTAAGAGCTACAATAACAAGTCTTCAATTTCGGATACCATCAAAAGGTGAATTGGAAGACTCAAACCAGAACGAAGG TTAA
Protein sequence (LotjaGi2g1v0336000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLKYYERKRSIVCPHSGQSFHRYYLNYRKSERPERVMLYNYSEWLDYSKDVVNLVKNDFDIKKAAVEIRLNGCELMLDF LHKCQVDLKTSLRQPIAWINEVGGCFFPEDYASYDGKSYKCEHEGMKICIEIKANGVVESKLRKCKGESNAIVKDTPIEF ENRMIKLDCGNGGEPILQNKVGLAPYTKSIQGNLDLDYVQKMFLDGMSSFGNTDLEIVEAYRCSGASMQARLELFRTQAK ITKEFHGDANVRYAWLPFLKGELSTMVGYGLGHCALCASKYAYGVGVQLAAVTCPYASARYCDIDENGVRHLILCRLIMG NMEILRPSINTNTGQFQPSNSKYDNGVDDIQCPRYYIIWNVNINTHIYPEFVISFKVSRDVEGHFCGNVGEINDFGTNYS GDNLASDLLQVASSVDNGIVANTPKIPKSPWLPFSMLVVAINDKVAPSDMSLNAHYKLYKTKQISRDGFVKELRLIVGDT LLRATITSLQFRIPSKGELEDSNQNEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 490 | 489 | 1.4E-165 | – | |
| PANTHER | 2 | 490 | 489 | 1.4E-165 | – | |
| ProSiteProfiles | 174 | 396 | 223 | 23.681 | ||
| Gene3D | 188 | 379 | 192 | 1.7E-23 | – | |
| SUPERFAMILY | 197 | 376 | 180 | 1.25E-17 | – | |
| ProSiteProfiles | 425 | 495 | 71 | 25.329 | – | |
| Pfam | 427 | 490 | 64 | 1.9E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD+ ADP-ribosyltransferase activity | Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor. |
Expression pattern of LotjaGi2g1v0336000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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