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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0337400 |
| Transcript ID | LotjaGi2g1v0337400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT2G35540.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49; TrEMBL-Plants: tr|V7CMW5|V7CMW5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0337400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81439563..81443789) extracted from Lotus japonicus Gifu genome v1.2.
GCACCTTGTCTGGGTCAGTCCGACAGTCACACACAGAAACATTATTTCCCCCAAATCTTTTCCCTCTCCTTTCCATCTTC CAATGGCACCGTCAAAGGGAGAAGAAGAAGCTTTGCGCCTCAAGGGTTTAGCAGAATCCAAGCTCCAAACCTCAAACAAC CCCAAATCAGCTCTCAAATACGCCAAGCGGGCCCAGCGTCTCTTCCCTGAACTCGAAGGCATATCGGAGATGGTAACCTC TCTCACCATCCTCTCCGCCACCGATTGGTACACAGTCCTCGGCGTAGAGCCTTTCGCCAATTCCAACGCCGTTCGGAAGC AGTACAAGAAGCTCTCCCTGCTCCTTCACCCCGACAAGAACAACACCCACGTGGCGGCGGCCTCTGAAGAAGCCTTCAAG CTCGTCGGCGAGGCATTCCGCGTGCTCTCTGACAGTGCACTCAAGAAGGGCTATGATGCTGAGCTTCGGAAGAAGGAGGC TCCGACTTTCTGGACCGCGTGCTCCGCTTGCAGGCTGTTGCACCAGTTTGAGAGGAGGTATGTGGGTCATAGCCTTGTGT GTCCTAATTGTAACAAGAGTTTTGAGGCTGTGGAAGCGGTTCTGAGTGATGGGTCTTCTGATGAGGGTGAGAAGGTGGGG GTGAGGAGGAATGAGAAGAGGGAGGTGGTGCTTGGGGTTGCGGCACCGAATGGGGTGAAAGGGAAAGTGGGTGGTGAAAA GGGCTTGAAGGGTAAAGTTGGAGATGGTGATGGTGTGGGAGATGTTGGTGGTGGTGGTTCGAAGAAGAGAATGCGTTCGG TTGGGGATGTGTTGGAGAGGTCAAAGCCTAAGGGGATTATAACTGGGGAGGAAACGATGACATTGGCTGAGTTTCAGTCT CAAGTGAAGAGGAAGGTACAGCAAGAGAAGGTGAAGGATAAGGAGGAGGAATGGGGCAGAACTGATAAGAGGAGCTCGAG GAAGAGAGTGGAAAATAAGAGGGGTTTAGAGATTGGTGAAGTGAGGACTTTGAAGCTTCCAATCAAGGAGAATGCTGTGA AGAGCAAGAGGGGTTCAGAGGTTGGGGAAGAGAGGAGTTTGAAGAAGAATGTGAAGCTGGCAATCAAGGAAAAGCCTGAG GCTTCTGGGAAGAGAAAGAGATTGGAGCTTGAGGAGTGTGGGGATGCTAATGGAGGAGAGTTGGAGGTTATGGCTGTAGT GGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGGAGCTTTAAGAAAGGCCAAGTGTGGGCGGCGTATGATG ATGATGATGGAATGCCCAGGCATTATGCCTTGATTGATGAAACTGTTTCAGCAAATCCTTTTGAAGTGAGGATAAGTTGG TTGGATCTACAGAGTAATGCGGATGGAAAGATAGTCAGCAGGGAGAAAATGGGGTTTCACATACCTTGTGGCAGATTTAA AGTTGCCAGGAAGGATTCCATTAATTCAGTAAATATCTTTTCTCATGTTGTAGACTGTGACCGGGTAGCACGTGAGGTTT ATAAAATTTATCCCAGGAAGGGCTCTGTATGGGCACTATACGGTGAGGCAACTCTTGATGCAGATGGAAGACATTTTGCA GATGAGGGCAAGAGATGCAATGACATTGTTGTATTTTTGACAAATTACAATGAGATGAATGGTCTGAGCATGGCATATCT TGAGAAGGTTGATGGTTACAAGACAGTTTTTAAGAGACAAGATACGGGGAGTCATGCCATTAGATTTCTTGGTAAGGACA ACATGTGGTTAATTTCTCATCAGATTCCCGCACGGAAATCTCCTTGCATTGATGAGACTCCTGAACTCTTGGAAGACTGT TGGGAACTTGATCCTGCTTCACTTCCTTCATATTTACTTACTATCGGTGGCATAGATAATTGAGGTTAGGAAATCTTTTT CGTGATGAGATTCTGAGTTCCTTCATATATACTTAATATTCGGTGGCTTAGAAAAATCAGTAAATGAGAACTATTGTCCC GTAGAGAAAATGATCTTATGAAACCCAACTGCTTTGTAAATTTTGACTTTGTTAAATTTGCATATTAAGGAAGATGTACA TGAATCATCGTATTCTGCTTTGATCAAGTGTGCATTTTTATCTATTTATATAACTCCACAATGTAGTATTCTGGTGAAGC CTGCTAAATCTTTAAACCTATTAATACTTGTGATGGAAGTCCTCAATGTCGACAATAGGCAGACTAATCCATGTTTAGTT ATGTAGTTCTCTTAAAAAACCATGTTTGCTAAAAATAGAATCTGGTTCTGTAAACTTCTTTCCAGCAATCTGCTGTTTAA AGTCAAACTTACTTTCAGAAGAACATGGAAATATGAAAATGAGCCCATTTGTTCATTGCTTCAAACTTGTTGGTTCATCA GGCTTTCTTTATGAGATATACTCATTTGTAATTGATCAAACTTATATGTTCTTTTTTGCCTTTTTTGTCTCTATTTATCA CCAGTGAGATGCCAAAAACTTTTAAAAGGTGATTAGTACATGGTTGGTTGAGCTTTATGAAATGCTGTACGAACACAAGG GTCCATGATTAACCTAGTCATGTTGATTTTATAATCTGTTTCTTCTTCAAGACAGTTGGTGTTGTTGATTTCCTCATGTC ATCTTTTAGTTCCCTGATTTAGAAGAAGAAATGCTGAATGCTTGTTAATTTTATCAGTTGAAATTGCTGCTACTTATAGC ATGTGTGTAGCCAAACAAAATCTCTCTTGATTACTCTTCCTTTCAAAGTAATACTTTTTTTTTAATGTTCTTTCACCATT ATGCGTAGTGCTATATATAATGTCATTACTTGTAGTTGTGACTAGACGTGATCCTACTGATTAGTTTGTGTTAGAATATC TAGAATATCTAAAATAATGATATCTCACAATATCATTATTTTATCTTAGGTAACCTCTTTGGAGTTGTTTCCATATTTCA TGATTTGTTTTTCTCTGTAGTTAGAATTCAGAGCCTGGTATGACTATGAGTATGAGTAAGGATTATCACCTTGTCTTTTG TATCAAGCTATTATACACGGGAATGTTATTATACACCAGAATGTTATTAAGAATCTCTATGCTTTCTCCTCCTCCTCTTT CCTGCTTAAGTCTATTATTTGAATGACTTGTAAAATTAAAGTAGGATTGCTGAAAGATCCTTTTATTATATATGAACTGT TTTGTGATTGGAAGCCTTTAGTTTCAGCTGAGTTATACTGGCTTATGGTGATGTATTTCTATATAACCATTTTACTGTTT GGTCATTGCAAAAATCAAGTTCTTTGGTCATACTTCACATCTGAAGTAAGCATTACCTCTCTCAAAACCTCCTCAACATT CGATAGCTTCCCCTCCTCAGGTATATCATGGTATCAAAATGTTGCTCCGCGTTGATAAGCCATGAATAACCTTTTCCTCC TTCAAATACGGGTATCTTCTCGCGTTCCTCTGTCTCTGCATTTCATTATTCTGCCTCTTCCAGCTCTCTGTTTGACACCA TTGCTGCTTCATGATCAGAACCCCACTGTGCCCACAGCTCCAAGATAGGAGCTCTCATACCAATTGATAGAAACTGGTAT CTTACTAGAAAAAAGTAGGGACTAACCCCAACTACTAAGATAGAACAACTCTGTTCCATGCTTCTGTGTTGTTAAATTCA TTAATGGAAATGGTGTACTAGCTCAAAGCAAGTATTGTTGGAGCTCTATGTGCAGTAATGTTAATTTTTTTATTTATCAG AGGAGTCCATACAATCCAATTTTCCGAGTTTCTGGAATAATCTAGTTGGATTTTTCATTACCCATTTCTATAATTAAAAT GTTTGTTCATTTGCTTGCATGTTACTCATTTTTACTGCAACTACTGGCTGCTATAAATTTCAAAACTGAGGTGCTGTAAT ATTCACAATTGGTTCTTCAGTTCTAAGCTCATACAGTGTTTAGAACAGGCAGAGACTGCAGATCTGTGTTGCAGTGCACT GAAACACTGTGTAATGGACTGAATGCAACTTGCATTCAAAATGTCACAGAAGGAAGTGAAAATTACCATAACATTAACTT TTGGCTTGAATCCTGGAAAGTTGACCCAAACATCTATCCTGACCAGTGGAAATTGATTAGTCCATTTGTTTTTGTTTGTT ATTTTCATTTAAATAGAGTTTTACCATTCATCATTATCCATTTGTATTACGTACTAGTTATCATACA
CDS sequence (LotjaGi2g1v0337400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCGTCAAAGGGAGAAGAAGAAGCTTTGCGCCTCAAGGGTTTAGCAGAATCCAAGCTCCAAACCTCAAACAACCC CAAATCAGCTCTCAAATACGCCAAGCGGGCCCAGCGTCTCTTCCCTGAACTCGAAGGCATATCGGAGATGGTAACCTCTC TCACCATCCTCTCCGCCACCGATTGGTACACAGTCCTCGGCGTAGAGCCTTTCGCCAATTCCAACGCCGTTCGGAAGCAG TACAAGAAGCTCTCCCTGCTCCTTCACCCCGACAAGAACAACACCCACGTGGCGGCGGCCTCTGAAGAAGCCTTCAAGCT CGTCGGCGAGGCATTCCGCGTGCTCTCTGACAGTGCACTCAAGAAGGGCTATGATGCTGAGCTTCGGAAGAAGGAGGCTC CGACTTTCTGGACCGCGTGCTCCGCTTGCAGGCTGTTGCACCAGTTTGAGAGGAGGTATGTGGGTCATAGCCTTGTGTGT CCTAATTGTAACAAGAGTTTTGAGGCTGTGGAAGCGGTTCTGAGTGATGGGTCTTCTGATGAGGGTGAGAAGGTGGGGGT GAGGAGGAATGAGAAGAGGGAGGTGGTGCTTGGGGTTGCGGCACCGAATGGGGTGAAAGGGAAAGTGGGTGGTGAAAAGG GCTTGAAGGGTAAAGTTGGAGATGGTGATGGTGTGGGAGATGTTGGTGGTGGTGGTTCGAAGAAGAGAATGCGTTCGGTT GGGGATGTGTTGGAGAGGTCAAAGCCTAAGGGGATTATAACTGGGGAGGAAACGATGACATTGGCTGAGTTTCAGTCTCA AGTGAAGAGGAAGGTACAGCAAGAGAAGGTGAAGGATAAGGAGGAGGAATGGGGCAGAACTGATAAGAGGAGCTCGAGGA AGAGAGTGGAAAATAAGAGGGGTTTAGAGATTGGTGAAGTGAGGACTTTGAAGCTTCCAATCAAGGAGAATGCTGTGAAG AGCAAGAGGGGTTCAGAGGTTGGGGAAGAGAGGAGTTTGAAGAAGAATGTGAAGCTGGCAATCAAGGAAAAGCCTGAGGC TTCTGGGAAGAGAAAGAGATTGGAGCTTGAGGAGTGTGGGGATGCTAATGGAGGAGAGTTGGAGGTTATGGCTGTAGTGG ATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGGAGCTTTAAGAAAGGCCAAGTGTGGGCGGCGTATGATGAT GATGATGGAATGCCCAGGCATTATGCCTTGATTGATGAAACTGTTTCAGCAAATCCTTTTGAAGTGAGGATAAGTTGGTT GGATCTACAGAGTAATGCGGATGGAAAGATAGTCAGCAGGGAGAAAATGGGGTTTCACATACCTTGTGGCAGATTTAAAG TTGCCAGGAAGGATTCCATTAATTCAGTAAATATCTTTTCTCATGTTGTAGACTGTGACCGGGTAGCACGTGAGGTTTAT AAAATTTATCCCAGGAAGGGCTCTGTATGGGCACTATACGGTGAGGCAACTCTTGATGCAGATGGAAGACATTTTGCAGA TGAGGGCAAGAGATGCAATGACATTGTTGTATTTTTGACAAATTACAATGAGATGAATGGTCTGAGCATGGCATATCTTG AGAAGGTTGATGGTTACAAGACAGTTTTTAAGAGACAAGATACGGGGAGTCATGCCATTAGATTTCTTGGTAAGGACAAC ATGTGGTTAATTTCTCATCAGATTCCCGCACGGAAATCTCCTTGCATTGATGAGACTCCTGAACTCTTGGAAGACTGTTG GGAACTTGATCCTGCTTCACTTCCTTCATATTTACTTACTATCGGTGGCATAGATAATTGA
Protein sequence (LotjaGi2g1v0337400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPSKGEEEALRLKGLAESKLQTSNNPKSALKYAKRAQRLFPELEGISEMVTSLTILSATDWYTVLGVEPFANSNAVRKQ YKKLSLLLHPDKNNTHVAAASEEAFKLVGEAFRVLSDSALKKGYDAELRKKEAPTFWTACSACRLLHQFERRYVGHSLVC PNCNKSFEAVEAVLSDGSSDEGEKVGVRRNEKREVVLGVAAPNGVKGKVGGEKGLKGKVGDGDGVGDVGGGGSKKRMRSV GDVLERSKPKGIITGEETMTLAEFQSQVKRKVQQEKVKDKEEEWGRTDKRSSRKRVENKRGLEIGEVRTLKLPIKENAVK SKRGSEVGEERSLKKNVKLAIKEKPEASGKRKRLELEECGDANGGELEVMAVVDSDFYDFDKDRVERSFKKGQVWAAYDD DDGMPRHYALIDETVSANPFEVRISWLDLQSNADGKIVSREKMGFHIPCGRFKVARKDSINSVNIFSHVVDCDRVAREVY KIYPRKGSVWALYGEATLDADGRHFADEGKRCNDIVVFLTNYNEMNGLSMAYLEKVDGYKTVFKRQDTGSHAIRFLGKDN MWLISHQIPARKSPCIDETPELLEDCWELDPASLPSYLLTIGGIDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 15 | 15 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 4 | 602 | 599 | 4.4E-213 | – | |
| PANTHER | 4 | 602 | 599 | 4.4E-213 | – | |
| Gene3D | 48 | 141 | 94 | 6.3E-20 | ||
| SUPERFAMILY | 52 | 128 | 77 | 1.01E-18 | ||
| SMART | 60 | 120 | 61 | 4.6E-19 | ||
| CDD | 61 | 117 | 57 | 1.36138E-17 | ||
| ProSiteProfiles | 61 | 128 | 68 | 15.869 | ||
| Pfam | 61 | 125 | 65 | 5.0E-17 | ||
| PRINTS | 63 | 81 | 19 | 1.9E-10 | ||
| PRINTS | 81 | 96 | 16 | 1.9E-10 | ||
| PRINTS | 100 | 120 | 21 | 1.9E-10 | ||
| MobiDBLite | 208 | 241 | 34 | - | – | |
| MobiDBLite | 276 | 297 | 22 | - | – | |
| Pfam | 369 | 572 | 204 | 3.9E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0337400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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