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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0346400 |
| Transcript ID | LotjaGi2g1v0346400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectin acetylesterase; TAIR: AT4G19420.1 Pectinacetylesterase family protein; Swiss-Prot: sp|Q6DBP4|PAE8_ARATH Pectin acetylesterase 8; TrEMBL-Plants: tr|K7K3Z6|K7K3Z6_SOYBN Pectin acetylesterase; Found in the gene: LotjaGi2g1v0346400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82302890..82310427) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAATAAAAGAAGTACATATAAAAACAATCAAACCCATTATTTTGGCGTGGTTTTTGTGCGAGAATCACTGTCGGTTC TTGGGTTCTCTGCCCAAACTGAAAAACTCTGAACACACTCACTTTCACAGGAACGACACCAACAATTCTTTAACAGGAAA TTCAAGACCCATTTTCTTCCCTCTACACATTTTTTAATCTTTTTCCCTCAACTCTTCTGCCATTGAAGTTGACATATCAA CCATTGTTAATGTTAGTTACATTCTAGTTGGTCCACTTCACAAGCCATCACATTCACCTTCACCTCAACTTGCTTTCATA AACAAACCTCCTTCAATCCTGAAGCATTGAGCGTTCTCTGCTGCACTGTCCACTCCATTCTGCATTTCAGGTATAGCTAG TTAGCTACTGTGATTCATGTTCATCCATTCTTTCTGCACATAATGCTAATAGTGAGTGAATGCGTTTGTATTTTTCATTT CGTTATTTTTTTTATACTTTTTCTTGTTTTGATCATCTGGGAATTTGTGGGGTTGGAATAAAGTTTCTAACTTTGGGTTT TAGAATATAGGATGGGTTGTTGGGTTGGAATGGGATCAGTGATTCGTTGTGTGCTATGTAGGCCATATGTGCAGTGCAGC GTGATATGCATTTCTGTAATTTTCAGTTGAGGAAAGTGGAAACCAATGGGGCATTGGGATTTGGGGTTAATTTGCTTGAC TTGATTAAAATCAGAAGTTTCAATTTCTGAGCTAAGATTGGATTATGCATTTATTGAATTGAATTGAATTTTCAGGCATC TTATGGATGAAGCAATTCAATGGTTCTAAGATGATGATAAGAAGTTAAAGTATTTCCATTTTGCTTTGTGGAAAAGTTGT ATCTGTTCATATGTGTTGATTAGGACATCAAATTCCATTAATTCCATATTTTCATTCCATATTCTATGTTCTCTTTTGCT TTTTATCTGCCAATTTGTACTTGGAAATGGGTAATTTTTGTTCCTCCATATTAAGGGCCTGGGATCTCCATAAGATTTAC AGAAGGGTTTTTCTTTTCTGAAAGGGTTTCCTTTATTATGCAATCTTATTGCTAATACTCTGTGATTTTATAAGGTGCTT TGTTTTTGCCTGATTATGCATAGCTTTATTGTTTTCTATTTGTTGGATATGCACAGAATGGAGAGCACAAGAACAGGCCA ATGGTTAAACCTTCTAGCGTGCTTATTGCTATTGCTGAAGGCAGAAGCTTCATATGTACCAATTACTTTAGTCCGGAACG CGGTAGCAAAAGGAGCTGGTTAGGGATTTTTGCGAACTTTACTAATTCTGCTCTTAATCTCATGCTTGCTGTTTTTTTAA TGATTGAGAAATTGAGATTCAATTTTTTTTTTTTTTGCAGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTTGATAA GGGATATGGAGCAGGGATTAACAGTTGGTTAGTTGCTTTTGAGGTGTGTCCCTTTCTACAAACTGCCATCAATAAGTTTG TATTCCTATATCATTTGATTGCAACGTGAATAAACTTTCATCCTTATCTATAAGAATAGTTACGCACATGCTAACGTTCG TTTGCAATAGTGTCAACGGATATCCAAATATAGCCTATAACGTTCAAGAAAACATTGCTTTCGTTTTTTTGTTTAACTCC TGGACAAAATGATTTTTTTCAAAATTTAGAGTCATCTGAAGAGTGAATCTTAAATATCAAATTTGTTCCAGTGTTCTACT TGTTTGGACAAAGCATTGAGGGTTCTCTTTGATTAGTAATGAACTTGAATTCTACTTCATTTATCTTAGGGAGGAGGATG GTGCAACAATGTCACCACTTGCCTTGGTCGCAAGAACAACCGTTTAGGTTCATCCAAGAAAATGGCCAACCAAATTGCCT TTTCTGGAATTTTACACAACAGGAAACAGTTTAATCCAGGTATTTCCCATTAGTCAATAGATCTTGTTTCTCCTTATGAA TCCCAAGTTTTGCTTACCCTTCTAAGTTCTAATGAGTATTGTAAAATTCAGATTTCTACAATTGGAACAGAATCAAGGTT AGATATTGTGATGGGTCATCATTTACTGGTGATGTGGAAGCAGTCAATCCAGTAAGTTCTGCAAAACTCAAAGGAATTTC AAAAATTAAATATCTACAAAAACATTAGTTATTAGTACAAAGTTTCCCTATTCTCTTCTTTCAGATAAAGTTTTAACAAA ATGATGTGTAAATCAGGTAACTAAATTGCATTTCAGAGGAGCAAGGATTTTTGCTGCTGTCATTGAGGATTTACTAGCAA AAGGAATGAAAAATGCTCGAAATGTATGAGACATTGATTATTTGCCAAATGCCACTCTATTGATTTCTGTTCATTCACTC ACGGAAACTTGTAACTTCAGGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAGTACTGCATTGTGATCGCTTT CGAGCTCTATTACCGAGAGGAGCTAAAGTGAAATGCCTCTCAGATGCTGGTTACTTCATCAATGCGTAAGTCCCTGTGAT TTGCTTTCTGCTTAGCATTTTCATGAAAATTTAGAGTTCCTTAAATCATACCATGATTCAATATGTTACTTTTAACAGAA GGGATGTCTCTGGATCAAGTTACATTAAACAGTACTTCACTCAAGTTGTTATCACACATGTACTCTTCCTTTCTCTAGCC ATTTTCCATTTTCTGAAGTATTTGTATGTGTTGTAATCTTTTCTCACTTTTCATTTGAAAGATGTTTTCTGAAGCTTTCA TTCAAGGGAGATCTAAATAAAGTTTGATTTTATTTTCTTTTTATTAGGGCTCTGCAAGGAATTTGCCTCAATCATGCACT TCAAGAATCAGTCCAGGGCTGGTAAAGTTCTGAATTATACAGTTACATCTTCCAACCTTTGCAATTCCATTTTAGGTGTT ACTGATACTTCTGATTTCTGAACAATCTTGCAGTGCTTTTTCCCGCAATATTTGGTATCACAAATCACTACACCAATCTT CTTTGTAAACGCGGCATACGACTCGTGGCAGGTTAGATTATGCTGTTGCTCAGCATACATCAGTTTAATTATTTGCAAAG TGGTGATCTTTGGTTTATATATTCATATCACTAGACCTAAGATACAACCAACTAGTCTTTTTGCTGATCCCCAAGATCTC GATTTGATTCAGATAAAGAACATATTGGCGCCGGGTGTAGCTGATCCTAGTGGCCATTGGCATAGCTGCAAGATGGATAT TAACAACTGCTCACCTGATCAACTTGATCTAATGCAAGGTGAATCACTGGATCTTAGTAATTTGTATCTCATGGAAATAT GCTAAACCTGAACTTAAGGAAATTCGTCAAGTTTATAATCAGAATTCAGAAATCATCCTCAGAGATATGTCCATAGTATG TCATGCCCCTCATAGGTTGTCATATCCTTCTGAAATTTCATGAAAGCTCTTAAGGGGCCTATGGAGTGTTGGTAATTCAA GTATGATGTCCGGAACACATTGGTTAAAAATGAATGAGGTGAAGAAAGTATAAGAGATGTGACCCATACACCAAATGTCT TATGGTTTTAGATGAAAGATGTGGTGTCAATCCACCTGTGTTGTTTGCTCTTAGCCCAATGTGGAGAATAGATCTTCTGG AGTTTTAGGCATCTCAGGGCCCAAAACAGAGTTCCCGACTGCACGATATTAAAGCAGTTCTATGCCTTCACTTTTTAATG CATGAGTTTATTTTCAGGCTTCAGGACAGAATTCTTAAGGGCATTGACTGTGCTAGGAAACTCTCCATCTAAAGGAATGT TCATAGACTCTTGCTATGCTCACTGCCAAACAGAAATGCAGGAGACATGGTTCACAAGTGACTCTCCTGTGGTTAACAAG ACAGTAAGAAACTGCATTATTTAAAAAAAAATCCTCTTCACCAGAAAATATAACATACCATGCTCTTTTTTATGTTTTCT CTTGGTTTTTTTACCTTCTCTCCTTCATATCCCACTCAGCTAAGTAGCTAACTTGTCTGCTTAACATTCTGCAGACGATT GCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGCTCTTCCATCAGATAGATTGCCCTTACCCTTGCAATCCCACTTG TCACAACCGCGTTTTCGAACCCCCACAAGACCATCCAGGAGTATAGATTCATTTCATCAAAATCTACACATACATACATA TATATTTCATCATTCTTATAAATCCATATTGATTGGTTTAGCTAGTGATTGATTAAGGAAATATAATTTGCATTTTTTAT CAAGCTATCAGAATAAGGAAAACCCGCCACTGCACTGATCTTGTGTGCTGGGCGCCATCCATCATTGTTTAATGCCAAGG CTCCTATATTCTTTCAATAAAAATGTATATTCCATTATTGCAATTCTGTCTATACTTGATGTATAAGAGTTTTACATTTG TGTGAATGTTAGAAAAATGTGACAACCAAAGGAACTTCAGGTGCATCAGCTAGAAGACCCAGTTTTCCTAAACTATCAGA CAAGGTGAGCTAAGTTGCATTATTCTGCAACAAACCACTCTTTTGTACAAATGTCTCACAGCAAGAAATTGATCAATGCT TTAGATTCAAAGTGATATGCAATGGATTCATGTTCTTTTTCACAGAATTTCAAGAAGGAAAAGAATGATTAGAGTCAGAA AACTGAACAAAGACAAAAAAAAATTGATGCTATAGTATTGAGACTTGTACAATTTAATAAATTTCACATTAATTTCAACC TCCAAGAAAGAAACTTCCATATAACTAAGAATTTTGTTTACTAATCCAATCCTCTCAAAGCTTTTGCGAGATCACATTAA ATGGGTAGACATCTCCCAACAACTCTTACAAATCCTTCCCTATACACTTTATCCAAAGATTAAATATTCGACTAGTGTTT AACGAGCTTAACTATCTATCAGTTGTGTCAGACGTTATCTTTTAAATATTAAAGTAACATAATTATTTAATATATATCTC AAAAAAGCCAATTCATCATAAACCTATGATTATCTCTCGGAATTCGAGCGTTGATTACTGATTCGTGATTCTCCGATCTC CGTCGTTACTCGCCGCCGCGAACTGAACTCAGCATCGTCGTAATCGTAGTGTTTGGTGGTGGTAATTTGTCTCTCCGATT ACCATCTCCACCCACCTCGCTTCAATCTATAACTTCGCTTTCAATTGTAGATCAATATACTCAATAACATCATGAATTGT GATCTTGAACTCTGTTTTACTTCCAGATAAACTGCATAGAGGTTTAAACTTGCATGTTTCATTTTTTTTTCCTTATTAGG CAAAATGGATTGAGCTTTTGTGCATTAGACAAGGGATCAGTGGGCTTCTATTACCTTTGGTTATTCTGGTAAGCATAAAT GTGAAAAGAAAAGCTGTTGTTATTCTCTTTTTTTTATTATTAATTTGAAAATTCTGTTGATGAGTGATATTTGTATGGCT ATTGCATCTTATAGGTTATCCTATAGAAGCTGATATGCTGATTAATTTTGACCAAACTGGGCCATCTGGCTTTTTTTCTA CCATGTAAGTAGGATTATGAATTTATGATTTGTGAGTTATGCCTTATGATTGATTTCATGATATGGATTTTGTTTCATTG TTGTTAGAAATATTCTTGGTACAGTTCCCAAAGCTAATAGTATACTACTATTGCTTATCTTATCTGCTTAGTAGTGTCAG TGGTTGAAGAAGTTGATGTATTTGTTTTGAGGATTATAAAATGACGTTTGGTAAACTTCAGATTGACTTTGTTGAAGAAC TTGTATATTTGTTTTTTTGGGTTTTAGTTTTTGTTATTGTGGGAATGATGGATTTATCAATTGGGTGCTGGTAGTGCAAA ACAATAAGGAATAAAAGGCTATCCTATTGATTTGAATCACTTTGTTCACTTCATAGAGACCTGCAATAAACTCCAGACAG AGAGCTCCCCAGTTGGGTCCTGTTTATTTAGTTTAAGCTTTAACTTAGCTGCGATTACTTGGCGTAAATTATTACTGCTG CATTCTGGGGGAGGGGATGTTCTGGTACTCTACTTTTGTGCTTCTTTTAAATGGCCTCTATCATAAGAAAGAATTGGTTT TGTGAAGCTTGGAAATTTTGCTGTTCAAGTTGTTAAATTTTGAAAAAATACTTGTTAGTTGCTGGATTCTCCCACTTATC TAAGTAAATGGGGCTCTAGGAGAGTTGTTCTCGGGTTCTATTACTAGTGGGACATATAATTGGGATGTTGATGACTGTTT CTGGTTGTGCATTGGTGAGGGGAAATAAACTAAATTCTAATGTGGACTGTATTTTTCAACGATTAGATTAAGCTACAATG AGTCTAGACTTGCTAAATGTTGATGTCAGACTCATTGAATTGTGAAGAAGCAAATAAATATGAGGTGTATTTAATTGAAC GGTTCATGAATCAGAGTGTGCTTTATTCATTTGCTGCTTTATCATTTTTTCCAATGAATTTTGCATTAAGTTTCGAAAGT TATAATGTTTCCAGGTTGCATACAGATAGGGAGATTTCTTATAATTCTAGCCTAATAGACTTTCTGGTAATGTATACCTC ACTTTGTGCATCATCAGTAATTTTAGACCTCAGTGTAGTTCTCATTTTAAACTTTGATAATGGAAATTGGGAATGACAGA CTTGGTGACACCAATTCACAAGAATTGGCTTGGAAGGTGCACAAAACCAGCTGGTGAAGGCGCAAATTAATGCTATCATG ATTCAGCGCTGCTGCATATATCTTGCACTGTAAGCACATAATCAAAATGTCTGGTCTTACTTGCTCAATTTTAAACAGGT CTTAGTGCCAAGAAAAATGTATACAGGAGTACTAATACTTTTTATAGGATGCTAATTAATACAACTTCTTTGTCTGCTCT CTCTCTTTGCATAGTCGTTTAGTTCAACAAGTGTGGACTTCCATTGGCCTGGGCAGCTGGTGTCATTGTAGCTGTTGATC AGTTAGTTTGGTAATCAACAATAAAGGCAGAAAATCTTTATAATGATGCACCTGAAGATGTTTCTGTAGCATATAGTCAC ATACTAACCTAAGGGCTGGTTTCACTTTTTCTTTTTTGGTCGGTCTGTACAACTTTTAATCTGTCATGAACATAGATCAT TTTGAAGGCCCAACTTAACAATAAAATCATGACCATCATTGTGGCTCTTTGTGCTTGCCTATATTAAAAAAGAATTTTTT TTTTGATGTATGATATGAGGCTTTCACAAGAGAGGTCACCTTACCAATGCTAATTGTTTGTCTGCTCACATGCATAAGAT CAATATCCAGATCCTAAGATATGGATTCTCTTATATGATATGACATTGCACGTTAAAACTTGTGTTTGTCTCTTCCTTCA TAAGGGTTTCATTTATTTAATATTTACACTAGGAGGGTGGTAAATATCAAAGATTTACATGATAATAACATGTGAATCAT GTGAAACCATGTGAAACC
CDS sequence (LotjaGi2g1v0346400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCACAAGAACAGGCCAATGGTTAAACCTTCTAGCGTGCTTATTGCTATTGCTGAAGGCAGAAGCTTCATATGT ACCAATTACTTTAGTCCGGAACGCGGTAGCAAAAGGAGCTGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTTGATA AGGGATATGGAGCAGGGATTAACAGTTGGTTAGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACCACTTGCCTT GGTCGCAAGAACAACCGTTTAGGTTCATCCAAGAAAATGGCCAACCAAATTGCCTTTTCTGGAATTTTACACAACAGGAA ACAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGGTCATCATTTACTGGTGATGTGG AAGCAGTCAATCCAGTAACTAAATTGCATTTCAGAGGAGCAAGGATTTTTGCTGCTGTCATTGAGGATTTACTAGCAAAA GGAATGAAAAATGCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAGTACTGCATTGTGATCGCTT TCGAGCTCTATTACCGAGAGGAGCTAAAGTGAAATGCCTCTCAGATGCTGGTTACTTCATCAATGCAAGGGATGTCTCTG GATCAAGTTACATTAAACAGTACTTCACTCAAGTTGTTATCACACATGGCTCTGCAAGGAATTTGCCTCAATCATGCACT TCAAGAATCAGTCCAGGGCTGTGCTTTTTCCCGCAATATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAACGC GGCATACGACTCGTGGCAGATAAAGAACATATTGGCGCCGGGTGTAGCTGATCCTAGTGGCCATTGGCATAGCTGCAAGA TGGATATTAACAACTGCTCACCTGATCAACTTGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCATTGACTGTG CTAGGAAACTCTCCATCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACAGAAATGCAGGAGACATGGTT CACAAGTGACTCTCCTGTGGTTAACAAGACAACGATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGCTCTTCC ATCAGATAGATTGCCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTCGAACCCCCACAAGACCATCCAGGAGTA TAG
Protein sequence (LotjaGi2g1v0346400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESTRTGQWLNLLACLLLLLKAEASYVPITLVRNAVAKGAVCLDGSPPAYHFDKGYGAGINSWLVAFEGGGWCNNVTTCL GRKNNRLGSSKKMANQIAFSGILHNRKQFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVIEDLLAK GMKNARNAIISGCSAGGLTSVLHCDRFRALLPRGAKVKCLSDAGYFINARDVSGSSYIKQYFTQVVITHGSARNLPQSCT SRISPGLCFFPQYLVSQITTPIFFVNAAYDSWQIKNILAPGVADPSGHWHSCKMDINNCSPDQLDLMQGFRTEFLRALTV LGNSPSKGMFIDSCYAHCQTEMQETWFTSDSPVVNKTTIAKAVADWFYERRLFHQIDCPYPCNPTCHNRVFEPPQDHPGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 395 | 395 | 7.0E-261 | ||
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 395 | 395 | 7.0E-261 | – | |
| Phobius | 12 | 20 | 9 | - | – | |
| Pfam | 21 | 371 | 351 | 4.8E-166 | ||
| Phobius | 21 | 24 | 4 | - | – | |
| Phobius | 25 | 400 | 376 | - | – | |
| SUPERFAMILY | 143 | 272 | 130 | 1.37E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0346400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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