Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0353500 |
| Transcript ID | LotjaGi2g1v0353500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MLO-like protein; TAIR: AT2G17480.1 Seven transmembrane MLO family protein; Swiss-Prot: sp|O22757|MLO8_ARATH MLO-like protein 8; TrEMBL-Plants: tr|I1J8B2|I1J8B2_SOYBN MLO-like protein; Found in the gene: LotjaGi2g1v0353500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:83003772..83008722) extracted from Lotus japonicus Gifu genome v1.2.
ATTTATTTGCAGAGTTGATGATCTTAGGTTTCATTTCACTGCTTTTGACTTTCGGGCAGAGTTACATTGTCAAAATATGC ATTTCTTCCAAAGTTGCAAAGAAAATGTTGCCATGTGCATATGATTATAAGACTACAGGCAAAGCATCTAGTAGTAGTGA AGAGGGAAATCTCAGGAAACTTCTGTCTTATGAACATAGATATTTAGCTGCTGATACGACCTCGTACAAATGCAGCAGGG AGGTAAGTGTTCTTTTTTTTGTCATAATTGAAACATGAATTGTTTACTTCTAACATCTATTTTGTGTTCTTTAGTTAAGA AGAGAACTGCAGCTAAACTTACAAATTGAAGTATTTGATATATATACTTAGGACTTAGCACTCTACTTGACATTGTTTGT CACTAATAACTTGCTTCTACAAACCATGTTTACTTCTAACATCTATTTTGTGTTCTTTTGTTTTCTTGAGCTTAAAAACA TGGAACTTGTCAAAGGGAAAACAATGAAAACGTGTGTTTTTTGGTTACCTAACAGTGCGGTTGAGAGTCTCATAATCACT TCTGCCAGAAATTGCTATATATAGCTTATGCGGTTACCATGCTTTGGATTGTGTGCTCACCGTTAATCAAAATGCAGTAT TAATCTCTTCTGAGTACTGCTTAACCAATGGTTGATGGTTATAGGGACATGAGCCACTGTTATCTGTCAATGGATTGCAC CAGTTACACATCCTCATATTCTTTCTAGCAGTTGTCCATGTACTTTACATTGCTATCACAATGCTTCTTGGGAGACTAAA GGTTTGCTTCTTTAACATTTTTGTAGAATACTAGTTCAAAACTTAAAATACTTCTCCATATCTGTGCATTCTAAGAATAT TGAGCTGAGTAGTACTCACCTTGATGACTTTTGCTTCTTACTCCTAAATGGTTTTTTTAGAACAAGAAAAAAACATGACT ATTTGTTCCAAGAATCTAAATGTGTTGACTATATATGCCAAAACATTTTATGGTCTGCATGCGGGACAGCCAAATCCATG GACACCCAGTTCACGTGGCTCGCAAATAAATGGACTGGTCCAGGTTGGCTTGCAAAATAAACAGGCCTAGCATATTGCTG GTTTGCATCCACCCTGCTTAGGCCATTAAGGGAAATAAGTTAATAAATTCAAAATTGGAAATTTTTAGAAAAAAAATATA ATATAGAAAATTCAAGTAAAAATGCATCCCTTTTCTTGATAATAAATGGTTAGTACAATTGATGGGTTTTTACTTTCTGC AGATACGTGGATGGAAGGCTTGGGAGGCAGAGACTTTAACTGATGGGTATGAGTTTGCCAATGGTATGAGCTCCAACATT GAGTGTGTTTTAATTTCTTACTGTCAAATAAGTTTGCTAGTTCTTCAGTTTTACTAACAAGCTTTATATTGCATGAAACT TTATGCCTATAATTGGGTGTTTACTATTTATGTTTCTGCAGATGCTTCAAGATTCAGGCTCACTCATGAAACATCATTCG TGAGAGCTCATACCAGTTTTTGGATAAGGATGTCTATCTTATTTTATATTGTAAGACCCATCTAACTACTCTGTTTTTTC TCCCTCTCCTTTTGCTTACTTGAGTTTGAGATTTGACTTTATCAAATGTGATGTTTATTAAAAAAAAGTAAGGTAGTACT TTAGTGGTTTTATTTGAGTTATAGCTCACAAGTTGTGTAGTGACTAGGGAGTTTGAATATCAAACTGGAACATTGTGGAA AATTTTGTATATAGACATTAATCAAATTCCTGCTTCTTCACAACTTCTATTCCTCATTATCATTTTAAAGTGATGATGTA ACACATCTTTTGTTTTTCAATTTCAGGGTTGCTTCTTTAGGCAGTTTTATAGGTCTGTGCGTAAGGCTGACTACCAGACT GTGCGCAATGGATTCATCACTGTAAGTAAAACACTTCTCTTTGCACTCACTATGTTTGGATTGGTTGTGGACACAATCCA AAGCACGGTAAGTCTAGAAGCTACACTTTGTAGCTTCGTAGCTTCTGCTAGCAGTAATTATGAGACTTTCCACAGAAGAC ACCAATTGTAGATTTACCTTCTTTTATCCACATGAATTATGTATAGGTCCATTTGGCTCCTGGATCTAAATTTAATTTCC AAAAGTATATCAAGCGAACATTAGAGGATGACTTCAAGGTAGTTGTAGGAGTCAGGTAACATTCCTCAACACAATGTCTT TGCATCATCATTTCGTGCATGTTTGGTTTCACGATAAGCATAGAATCCAAGACACGCTTACTCAAAAGCTAAGACTCGGA GCTTCTATCCAGATGTCGTTCTAGGGTATTTCCCCGTGGAACCAAGCATACTATTAATGGTTTTTCCAAGTATATGTTTG AAATGTGTGCTCACTCTGCTCCACTATGTTGTTTACAGTCCTGTCCTTTGGGCATCTGTTGTAGTTCTCCTGCTCCTAAA TATTAATGGTTAGAAACTATGTTCTTATTGGAGTCCTATGGAATTTGTTATCTCTGCTGTTCAATATTGAATTAAATTAA GTATCATAGTTGGTTAATCCTATATAATTTCCAGGATGGCGTACAACAATATGGGCAACCTTGATTCCTGTTATTGTAAG CATTCTGTTATGTGTGTGGAATTCTCAAATTGGTTGAGATCTACAATTTTAAGCCATTTACTTGGTTGCAGATGATTTTG GTTGTTGGAACAAAACTTCAAGCCATATTGGCAAAGATGGCTCTTCAAATCACAGAAAGACAAGCTGTTGTTCAAGGAAT GCCTCTTGTGCAAAGCTCAGACAGATACTTTTGGTTTGGTCAGCCTCAGTTAGTTCTTCATCTTATCCATTTTGCTTTGT TCCAGGTAACAAATGGCTTTCCTTCTAGCAGAATCTATGACAAATGTTTTGATACGGGACAGACAATGTATGATTTCAAA GATTTACAGTTGATCAGTCTTAGTTTGAGGCAAATGAAAATTGCTAATACTCAATAATAGGTTTCTATGGTAGTGGAATG TAACTAAAGTGAATTTCACTTGTTAGTGTTAGGCTATATTTGGATATTTTTTTGCACTCAAACAGACATTAGCTTACACA TTTCGATATCAGCTGAGTGCAACGCCATTGAACTTTCATCACAATCCATAAGAAGAGTTTCGTTAACTTTTCATCTTGAA GTGTGTGTCAAGTGTTCTTGAAGTGTGTGTGTCAAGTGTCAACATCCATTTGCACTGGAACCTCTCACTCTCACTGTAAA ACCTGCAGAGATATCTAGCGTGAGACAGTTAAAAAAGAAGAAAGAACTTGATAATTGTGAACACTAATGTCACTTCTAGA ATGCAGAAAATAACATGCATTACTTGGAAACTTGCCTGTCTGCTCAGGAAATTCTTATTCTTCTTGGTATTCCAGGAGCT TGAATTTGTAAAATTTAAATTTGTTGTATCCAATTTAAGATAGCAAAATACATGTGAGAGTTGAAAACATTAAGTGAAAG AATTTTATTTCTATTTTTTTATTGAAGTTAGTTGACTACTAATTGATTTTCTTATACTCGCAGAATGCGTTCCAGATAAC ATTTGTCTTGTGGACATGGGTACCGACCCTTCATTACACCTTAATCTTGAATATTAACAAGTGTCTAATTGTTTTCTATA CTTCTGATTAATAATAAAAAAAATCTTTATTTGCAGTATTCTGGGCTGGAAGACTGTTTCCGTGTTGATTACAGGATTGC AATTATAAAAGTGGCTACAGGGTAAGCCTTGATATGTAATTTTCTTGCCATGGTATGGCATGCCTAAAAATGCATTTCAT ATTTCACCGCCAAAAAATTATTTCTTTCTTACTTTCACTAAGAAATAATCTGACTAAATTCTCATGTGATTTGCAGGTTT GTGATGCTATGCCTGTGCAGCTACATCACCCTTCCATTATATGCTCTTGTATCTCAGGTATCTAGCTACATACATGTTAA TATGTTATGATTTACTGAAATATGGTTATATGTATGATTTGACACACTCTTCTGCATGGTATCATCATTTATTATTTGAT CATGATCTATAATTTCACAAATTATGGATCCTTATCATTGTAATCACTTGCAGATGGGTACAAATATAAAACATTCAATA TTTGATGAACAAACATCCAAGGCTCTGAAGAAATGGCAAATGACTGTGAAAAAGAAGCATGGAACAGCTAAGCTAGGAAA ATCCACTGCACCAAGCATGGAGAGAAGCACCCCTGGTTCAACAGTGAGCTCCCCTGGACACATACTTCATCGGTTCAAAA CTACCGGCCACTCAACCCGCTCTTCTGCCTATGATTACGAGGATCAAGATCATGAATATGAATCTGATATTGAGCTATCT TCCATATCAACAAGGAGCTTGCTTGTAAAAGTTGATAATGATGAGCAACAAGCAGAAGATACGCATCATAGTAAGGGAGA AACCAACAGTGAGGATGAGTTCACGTTTGGCAATCCTGGCCTTGTGGAAAGAACCACGATATAGGATTGTAGTTACTCGT AGCATGTTTGAATCAGCTCCGCTTTTGTCAGAATCAATTCTGAAACACGGAAGCTACTCACAACAGTTTCTCTTTAGAAT TGAATATGGCTTCAGAATCAGCTGAAGTCACTCCTAGTGTGTCCATCTTTTTCCTTTTTTCAGCTTATGTTTACCTTTTT TTTAAAATATTAACACTTTCTAGGGTATGGATATTTTAAATCTTAGGTGATCAGGTTAGTACATTCATGTTCATAAATTG CTTGTCCGTATTGGGAATTTCATGCTGATACATTTGATCCATGCTTGAGCAAAGGCTCGTATTGTACATAATGAATAAAA GTTTTGATATACTGTCATAGTGTCATTGTACATTATCATATAATGATGTGAAAATATCTTGTAACAATCTC
CDS sequence (LotjaGi2g1v0353500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTTCCAAGTATATGTTTGAAATGTGTGCTCACTCTGCTCCACTATGTTGTTTACAGTCCTGTCCTTTGGGCATC TGTTGTAGTTCTCCTGCTCCTAAATATTAATGGATGGCGTACAACAATATGGGCAACCTTGATTCCTGTTATTATGATTT TGGTTGTTGGAACAAAACTTCAAGCCATATTGGCAAAGATGGCTCTTCAAATCACAGAAAGACAAGCTGTTGTTCAAGGA ATGCCTCTTGTGCAAAGCTCAGACAGATACTTTTGGTTTGGTCAGCCTCAGTTAGTTCTTCATCTTATCCATTTTGCTTT GTTCCAGAATGCGTTCCAGATAACATTTGTCTTGTGGACATGGTATTCTGGGCTGGAAGACTGTTTCCGTGTTGATTACA GGATTGCAATTATAAAAGTGGCTACAGGGTTTGTGATGCTATGCCTGTGCAGCTACATCACCCTTCCATTATATGCTCTT GTATCTCAGATGGGTACAAATATAAAACATTCAATATTTGATGAACAAACATCCAAGGCTCTGAAGAAATGGCAAATGAC TGTGAAAAAGAAGCATGGAACAGCTAAGCTAGGAAAATCCACTGCACCAAGCATGGAGAGAAGCACCCCTGGTTCAACAG TGAGCTCCCCTGGACACATACTTCATCGGTTCAAAACTACCGGCCACTCAACCCGCTCTTCTGCCTATGATTACGAGGAT CAAGATCATGAATATGAATCTGATATTGAGCTATCTTCCATATCAACAAGGAGCTTGCTTGTAAAAGTTGATAATGATGA GCAACAAGCAGAAGATACGCATCATAGTAAGGGAGAAACCAACAGTGAGGATGAGTTCACGTTTGGCAATCCTGGCCTTG TGGAAAGAACCACGATATAG
Protein sequence (LotjaGi2g1v0353500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFPSICLKCVLTLLHYVVYSPVLWASVVVLLLLNINGWRTTIWATLIPVIMILVVGTKLQAILAKMALQITERQAVVQG MPLVQSSDRYFWFGQPQLVLHLIHFALFQNAFQITFVLWTWYSGLEDCFRVDYRIAIIKVATGFVMLCLCSYITLPLYAL VSQMGTNIKHSIFDEQTSKALKKWQMTVKKKHGTAKLGKSTAPSMERSTPGSTVSSPGHILHRFKTTGHSTRSSAYDYED QDHEYESDIELSSISTRSLLVKVDNDEQQAEDTHHSKGETNSEDEFTFGNPGLVERTTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 36 | 25 | - | – | |
| TMHMM | 15 | 36 | 22 | - | – | |
| Pfam | 18 | 224 | 207 | 4.3E-78 | ||
| PANTHER | 19 | 286 | 268 | 2.8E-97 | – | |
| PANTHER | 19 | 286 | 268 | 2.8E-97 | – | |
| Phobius | 37 | 41 | 5 | - | – | |
| Phobius | 42 | 64 | 23 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 65 | 97 | 33 | - | – | |
| Phobius | 98 | 121 | 24 | - | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 122 | 132 | 11 | - | – | |
| Phobius | 133 | 161 | 29 | - | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 162 | 299 | 138 | - | – | |
| MobiDBLite | 192 | 220 | 29 | - | – | |
| MobiDBLite | 201 | 220 | 20 | - | – | |
| MobiDBLite | 264 | 282 | 19 | - | – | |
| MobiDBLite | 264 | 299 | 36 | - | – | |
| MobiDBLite | 283 | 299 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0353500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…