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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0364100 |
| Transcript ID | LotjaGi2g1v0364100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Interactor of constitutive active ROPs-like protein; TAIR: AT5G60210.1 ROP interactive partner 5; Swiss-Prot: sp|Q9LSS5|ICR3_ARATH Interactor of constitutive active ROPs 3; TrEMBL-Plants: tr|I1LKC3|I1LKC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0364100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86164002..86171089) extracted from Lotus japonicus Gifu genome v1.2.
CTCCTCCTTAAAACCAGTTTAATGTGCGTTCCTGAAACGACAAAACTGTACCCTTTGTTACTTACCCTTTCTCGGTTTCA CTGCACACTATCCACTTCACTGAACACACACTACAAAGCAGTGAAAACACATTCACACAACAGAGACACCATTCAAGAAA ACACCATACAAAGATCCTACTTCTGTGTTCTGTCTGCACTTTCACAAGGTTAGAACTCATGAATAATGCATCTCTTTTTC TCACTTTGCATTTTGTGTTGCATGGTATTTGTTTCAATGCAAAATGCAGCATAAAGAGTGATAAAGAAAGAAAGAAAGAA AAAATGTCCACACACGTTGTTTTGTTGGTTCATTTTGCTACTTATTTTCCAGGTTAGCTAGCTATAGTAGTACCACATGG GAAGCAAATGCTTCATTTGAGGGTCCCTTTGACTTGAAGCCTTGAATTTCATCTTTTTCTTCTTCACATTTTGTTACTAT ACTAAGTTTTATTTTATTTTTTCCATTCTTTGAACCTGAATATAAATGATGCTTCTTTACAAGCTCTCTCTGCTTTTTCT TTTTGCAACCCACTTTTTGCAAAGAATTTGTTTGGATTATAAAGTTTTGCTGCCAAAAGAAACTGGCATTAATGCTGTTC TCTGTATTGGAAGCTCAGGAGCTGCAAGCTTTCTTAGGTTTCATGTATGATTATAGTCCTTTTTACATGTCTTTCTTTAA ATTCCGAAGAAATATTTTTTTATTTTTTTAAAAAGAGGGTTTGGTTCTAAAATGTACTTACTTCTTTTGTCTTTTTGTTT CTGTTCTTCTTCCTCTTTTTATTTATGCTGTAATAAATTAGTATCCCTCTAATAAATGATAGTTACTTCTCTCTCATTTT TAATCTCAAAAGACGTGCCTTTTGGTCTTCCATTATCTTCTTGTGTTGTGGAGTTCAATGAGCTTGCATGCTGTAGATCT GAGCCCTGTTTTTTCCTTATCTGAAGTGACCTTTGAGGGGGTTTTCCTTCTCCATTTTGGCGTTTCCCTGTTCAGCAACG CACATTTGTAGAAGCCTTGTTTGGTTAGAATAAAATATCTATTTTCTGCAAAACCAATTTTGTTTGTTCCCTCTTGTGAA AATATCAAATGGGTGAGCCAAGTTATCATTTTGCTTATAGTATTCAAAGGTTTGAGCGCTTTAAGGTAAACATACATACA TGTCTTATTGTATCAAGTGACATGCTTAATTTCCCTTAAATATAGTATGGAGTTTGAGTTTTGTGTATGGAAAAAACAAA AAACCCCACTACGAGAGCTAGTTCCACCAGATGTGAATGTTCATAGCTTGAACAATTTGCCTCTTGTGGAAGAAAACAAA ACTATTGTTGGATGTGTCATGCCTTATTTCACGGCAAAATTGGAGGCTGAGACATTTTTATCTGTGGTGCACTAAAATGT CCATTTTGTATGTGTGAGGATGGGGTTTATTCAAGTAGATCATGTGGGTAAACGAGCATTTTCTCCATCTGAGATGTGGG GCATCTATGTAGTTTCCTTATGTTCTGTTGCTGTAGTTGTAGGTCCCTCTTGCTCATAACTTGGTGCTGTTAGCATGAAA GACCTTATCATGGCTTCAGTTGGTAAAAAGAGAACATTTTTTTCTCATGTGTGGACATATGGCTCATGTATTATATTGAT ACAAATCTGCTTGACTTTTATCTCACCATCCTTTTATAGTTATCTTTTGGTACAGTTTATAATTTTTTTTAAGGTGTGAA CTCTAGTAAAATCCAGTGAATATCTATACGGTTTTCTATATTAATTATTAAAAGGATAGTGATGCACTAATTCAAGGCCT CAAGGGGTATGGACCAACAATGTGTTGGTACGAGTGGAAGGGGCTCGAGTCTCTTAAGCACGTGATCCTGGATTCGTTCC ATTGATCTATGTGTATGAAAAAAAAATTAAGGGGTAGGGGAAGGGCTGGTCACTACTAGTGAGGTACTGTTTTTTAGCAG TACAGTGAAAATCACACATTGAGTAAATATTCTGCATTTATAGCTCAGGGGGAGAAGATGAGAGGATCATCCATTCTGCG TGAACTTATTTAATTTTTCTTCATATCATTGGATTCTCTTGTCTCAGATTGTGATATCTTTCTGAACTGTTACAGTCCTT GTGGGTCAGGGTGCATTCAAGCAGTGAGGTTCAAATTACTAACCCTTTTCACTTTCCCCGGACTGAAGGCAATTGAGTCA TGCAGACCCCAAAGACAAAGACAAGGTAATCTTGAAATCCTTCTGCCATTGTTGTTTCCTGTTTTATTAGTGTTGCTCCT GTACTTTGCTAATTCAAAAAGATTTTTCTGATTTTAAAATGTGATCTTAAAGCTAAATATGTGGTGTTTCACTATTTCTT GTATGTCATTTACTTCTCTCTCTAATACAGGTTTGCTTGATTCTCTTCTCAGTTTTCTGAATTTAAAAACTATTTTCAGA AACAATTTTTGAAACCTGTTTTTTCAGAAGAAGAAAACAAAAAAGGAAACAGTTTGAACAATATGTTTTGCAAAGGTGAA AGACTTGAAAACTAAGAACATAAACCTTATCTCTGAAATGTTTTGAAATATTAACTTTTAAAAACTGAAAATAATAACAT GTATTTAACAGCAGTTTGTGCATCAAATGTTTATTAAATCTTCAAGATTTTATCTTTTTTTTTTGTATTAACTCTATGAA TGTCCAGTCTTCTCTACATGCTGCTGCCCCTTTGTTTTCTTTTGCTTTATCTTGTGCCAAAAAAATATACCACTGAGTTC ATGCCACTTTCATATGAAGCTAGTAGGTACAGTATTTGAGTTGTTTCTATGTGTGCACATGTAATACCTAACTGCAAGTT GGTCCTGTTGTCCTTGTCCTGCAATGATAATTTTACTGGCCATTTCTTTTCTTTCATTTATTTGAAAAATAGTAGTTATC TTGAAGAAAGGAGAAAAGAAAAAATAAATGGATGGCTAAGCATGTTTGTCCCCATGCCTAAACGCCTAACATGTCTCATT ATTATGTTTCCTTTTTGGTTCAACAAGGTCTCATTATATGGCTCCTACCTTTAGCTGCAGAATTTGAGATTGGGGACCCA GGGTAGTTATTACCAGTCCTACTCCTAATGAGCCAACAACAAAATTTGTATTTTTCTATGAACTCCCTTATTACTATTTT CTTTCCCAAATGAATGTCAACATTAAAAAAGTAATATATTTTGAGTTTAATAACTATACACTTTGAAAATTTAAAAATCA GGATTCACCATTTTGCCACATTATAAATAAATTAAAATAAAAAAAACTAGAATTGAAACTGGACAAAGTATGACTGGATG TATATGTAGAACTCTTTACAGTGTCACTGCATATAAGTTCAATCCATTTACTTTTTGGATTGAGCAATGGTGATAATATA TCTGGTGATTGAATATGGTTTTCTGCCATTTACTAGAAAAAGCCTGTGATTGAAAAATCACTATGTATCACTATCATGTG CTTGGAAGACTCTTTTCATTTTCAACTTGAATTTGAGTTGGTGACATAAGTTATTTCAGCAGGGCTATATTGTAACTTTA GGGATCTTTCTAACATAGTTGCAGTACTCAATTGAACAATTTTGTATGTTAAATTTGGTTTTAACAATGGTTCACATATC TAAACATTTGAGTGTGAGGATAATGCTCTATTATATGGCATCAATGTATTTATTGTTAGAATGGAGAGATAGACATGGTT TTCCATTCCTCACTAAGGGTTTCACTGGTTTACACATGTTTATTCTGATTTCAGAAGTGGCTCCTCCTCTGAAGTGCCTC AGAAGGTTTCTCCTCGCGGTTCACGCCTATTCAGGCCTACTGCTCTAGAAACAGAATCTCTAATTGTATCTTCTTCAAAT CAAGCTAATAAAGTAACAAAGGAAAGAAGCCCCAAAATCACTGACCGAAGATCACCAAGAAGCCCAGTTCCTGAGGTAAT CTCTTTTAGCAAGTAACTGTACCCAAAAAGATTAGTTTTTTCAATTCACGTTTTAAAAACGTAAATTTTTTGTTGGCAGC AAAAAAATGTAAACTTATATTAGAATAAATATGTTTCCAGAGTTCCAATTTCTAGAATTAATTTTTTTTTTGAAGTACAA TTATACTCCCGGAAGTTCAAACTATGGAGGAAATGAAATTTTGAGTTACACTTCAAGAACTTCAAGTTCAATAATTGAAA TTTTATATAATGAGTATTTTCGGATGGGAAGGTTTTAGGATGTGTAAAGTGTAAACAGTGGTAATTTTGTTGTTGTTTAC AAAGTAATCTCCCTTTTTTTTGTGTGCAAACAAACTAATCTCCCCAAATAAACTCTCCAGCTGGTTAGGGCCGAACTTGG TGGTGGAAAGTGTTTGCCCCTTTGGTAGAAGAAGCAACTTGTTAGTTAGATAACAGCTTAGTTAGTTGGCAAGCAGCTAC ATTGGCTGGTTAGTTACATGTCAATAGGGTTTAGGTATAGTTAAATAAGTGTTTAGGGTTTAGGTTGGATAAATAAATAG GGCACTCATTATGCAATGGTTTCACTCTGGAAAATTAAATAATAGAACCTACCAAATTCAATCATAAGGGAAACCTTGAA ATAGGCTCTCCCCCTTCTCTAATATCTTTCTCTTTCTCTATCTGCTAAATCCTTATTTTTGGGACCCTAGCCCCTCCTAG CTAAGTTATAATGAATGCAGTGGACCTTGTTAAAATGGTTTTGCTTTTGAAATTTTTCAAGTGCGTTCAAATCACTACTA ACAGAGTAGGTAGGAAAAGTTACTGAGTTGCCACATTCATCTTCTCATTGGTTTTATGTGTGTCTTGCATTGTACCTTTT TAAAATTATTGATGACTTGAGAAAGCCTTAGGTTTCATATCTTTTATCTTGTCTCATTTTTCCATTTTGTTCTACTTAGA TTTTGGTAATCCAAGTTAATTTTGTTATGTTACTTTCTGAAATTCATCACTGCATTCTTCCTATTTCTTGAAATTTGTAT AGAATTCTAAACCATCCTTGTTTTATGCTGCTTTAGAGGAAGCGCCCCAGTAGAATATCTGAATTGGAATCTCAAATTTC TCAACTTCAAGATGATCTGAAGAAGGTGAGGGACCAGCTTATTCTAACTGAATCATGCAAGAAGCAAGCTCAGCAAGATG CTCAAGACTCCAAGGAGCAACTTTTGGCGTTATCTGCCAAACTTGAAGAGTCACAAAAGCAATATCTGGAGCTCTGTACT ACTGAAGAAGCTCGCATTACCGAGCTTCAGAAAATCACAGAGGAATGCAACAGGACACGGCAATCCGAGCTTGAGGCCTC CCAGAAGCATCTCTCAGTTGACTCTGCTGCATTGGCCTCTGCAGCGAATGAAATTCAGCTTCTGAAAGTCCAACTTGAAC TGGTAGCTAACTGTGAGAGTGTCCAAACTCATCATGCAGAGTCAGCAGATGTGGAGCTGCTAAACCTGAAGCAAAACTTG TCAGAAACTCTTTCTCTTGTTGAGAACATGAAAAACCAACTAAGGAATTTCAAAGAATTTGAAGCTCAGGCCCAAGGTTT GGTCAGTGAAACTTTGTTGCAGCTTGAGACTGCAAAAAGAACTGTGGAGATTCTCAGGGGTGATGTTGCAAAATCTGTAG ATGGCTACAAATCCATTGCTTTAGAATTAGACCAATCTAGAGCAAAGGTGAACACACTAGAAGTACTTGTAGAGAAACTT AACCCAGATTTCATCAACAATAATTGCAATAATTCTGGAGATCTTGTAGATGGTCATAGATCTGATCATGTTGAAGCAGA AATTTGTTCTCTGAAGTCTGATGTTGGAAGACTAAGATCTGCTGTGGAGACTGCTGAGATAAAATACCAAGAAGAACAGA TTCGGAGCACAGTGCAGATCAGGAATGCCTATGAGTTGATGGAGCAGATAAAATCTGAATCGGGTCAAAAGGAATGTGAG TTCGAGGCTGAATTGAAAAGAAAGAAAGCTGATATTGAAGAGTTGAAGGCTAACTTAATGGACAAGGAAACCGAGCTGCA GGGTATTATGGAGGAGAATGAGAACTTGAATTCTAAACTTCAAGTGAGAACATCATCCCAAAGTGACCATGAACTTAGGA ATGAAATTAAAAGATTAGAGCATTGTGTTGCTGAATTGAAGGCGGATATGATGGACAAAGAGACTACATTGCAAAGCATA TCTGAAGAGAACGAAATGCTGAAGTTGGAAAGGAACAAGAGTGAGGAAATAGAGGCAGCTAAGGCTGCAGAACATGAAGC TCTCATGAAACTTGGGATCGCGATGCAGGAGGTGGAGAGCAGCAGCCGCAAGGCGGCGAGAGTAACCGAGCAGCTTGAAG CGGCACAAGCATCGAACTCGGAAATGGAAGCTGAACTGAGAAGGATGAAGGTGCAGTCTGATCAATGGAGGAAAGCTGCA GAGGCTGCTGCCGCTATGCTTTCGGCAGGAAATAATGGGAAGATCACAGAGAGAACAATGTCTCTGGATGACAACAGCTA CAAATGCTCACCCTTTGCGGAAGAGAATGATAACGACTACCTGAGGAAGAAAAATGGCAACATGCTGAAGAAGATTGGGG TCTTGTGGAAGAAGCCTCAAAAATAGTGACTGTCTGACATATGCTGTGTTATGAAATTATAGTCCAATCAATAATATTTT GTTGCTGTAATGTTTATGTCTTTTGCGGATTCTCTTACCACAACACTTCTCTTTTTCACTGCATTATTGTAAATCCTACC TGCACTTGAAAATGTCTGTGTTTTTTTCTTTTTGAAATGAAAATGTTTGTGTTCTGTACTTGGAAAATTTATTTTTGTGT TGAATGAATTTAGTTCTTCATATATAATCTGCCCTCCCAGATGAATGATTGTAGGCCTATTTATAAGAACTTGCAACCAT GTGAATGTTTGTAAATCATTTTACGGTTCATTTTAAAGACATAGTCAATTTTAGGTAGAAGTTTATGTGGGTACTGGGTA GTATATGGTTTTCAGAATTGATTATAAGAAATCGAAGGTGATCAAAAC
CDS sequence (LotjaGi2g1v0364100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGACCCCAAAGACAAAGACAAGAAGTGGCTCCTCCTCTGAAGTGCCTCAGAAGGTTTCTCCTCGCGGTTCACGCCT ATTCAGGCCTACTGCTCTAGAAACAGAATCTCTAATTGTATCTTCTTCAAATCAAGCTAATAAAGTAACAAAGGAAAGAA GCCCCAAAATCACTGACCGAAGATCACCAAGAAGCCCAGTTCCTGAGAGGAAGCGCCCCAGTAGAATATCTGAATTGGAA TCTCAAATTTCTCAACTTCAAGATGATCTGAAGAAGGTGAGGGACCAGCTTATTCTAACTGAATCATGCAAGAAGCAAGC TCAGCAAGATGCTCAAGACTCCAAGGAGCAACTTTTGGCGTTATCTGCCAAACTTGAAGAGTCACAAAAGCAATATCTGG AGCTCTGTACTACTGAAGAAGCTCGCATTACCGAGCTTCAGAAAATCACAGAGGAATGCAACAGGACACGGCAATCCGAG CTTGAGGCCTCCCAGAAGCATCTCTCAGTTGACTCTGCTGCATTGGCCTCTGCAGCGAATGAAATTCAGCTTCTGAAAGT CCAACTTGAACTGGTAGCTAACTGTGAGAGTGTCCAAACTCATCATGCAGAGTCAGCAGATGTGGAGCTGCTAAACCTGA AGCAAAACTTGTCAGAAACTCTTTCTCTTGTTGAGAACATGAAAAACCAACTAAGGAATTTCAAAGAATTTGAAGCTCAG GCCCAAGGTTTGGTCAGTGAAACTTTGTTGCAGCTTGAGACTGCAAAAAGAACTGTGGAGATTCTCAGGGGTGATGTTGC AAAATCTGTAGATGGCTACAAATCCATTGCTTTAGAATTAGACCAATCTAGAGCAAAGGTGAACACACTAGAAGTACTTG TAGAGAAACTTAACCCAGATTTCATCAACAATAATTGCAATAATTCTGGAGATCTTGTAGATGGTCATAGATCTGATCAT GTTGAAGCAGAAATTTGTTCTCTGAAGTCTGATGTTGGAAGACTAAGATCTGCTGTGGAGACTGCTGAGATAAAATACCA AGAAGAACAGATTCGGAGCACAGTGCAGATCAGGAATGCCTATGAGTTGATGGAGCAGATAAAATCTGAATCGGGTCAAA AGGAATGTGAGTTCGAGGCTGAATTGAAAAGAAAGAAAGCTGATATTGAAGAGTTGAAGGCTAACTTAATGGACAAGGAA ACCGAGCTGCAGGGTATTATGGAGGAGAATGAGAACTTGAATTCTAAACTTCAAGTGAGAACATCATCCCAAAGTGACCA TGAACTTAGGAATGAAATTAAAAGATTAGAGCATTGTGTTGCTGAATTGAAGGCGGATATGATGGACAAAGAGACTACAT TGCAAAGCATATCTGAAGAGAACGAAATGCTGAAGTTGGAAAGGAACAAGAGTGAGGAAATAGAGGCAGCTAAGGCTGCA GAACATGAAGCTCTCATGAAACTTGGGATCGCGATGCAGGAGGTGGAGAGCAGCAGCCGCAAGGCGGCGAGAGTAACCGA GCAGCTTGAAGCGGCACAAGCATCGAACTCGGAAATGGAAGCTGAACTGAGAAGGATGAAGGTGCAGTCTGATCAATGGA GGAAAGCTGCAGAGGCTGCTGCCGCTATGCTTTCGGCAGGAAATAATGGGAAGATCACAGAGAGAACAATGTCTCTGGAT GACAACAGCTACAAATGCTCACCCTTTGCGGAAGAGAATGATAACGACTACCTGAGGAAGAAAAATGGCAACATGCTGAA GAAGATTGGGGTCTTGTGGAAGAAGCCTCAAAAATAG
Protein sequence (LotjaGi2g1v0364100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTPKTKTRSGSSSEVPQKVSPRGSRLFRPTALETESLIVSSSNQANKVTKERSPKITDRRSPRSPVPERKRPSRISELE SQISQLQDDLKKVRDQLILTESCKKQAQQDAQDSKEQLLALSAKLEESQKQYLELCTTEEARITELQKITEECNRTRQSE LEASQKHLSVDSAALASAANEIQLLKVQLELVANCESVQTHHAESADVELLNLKQNLSETLSLVENMKNQLRNFKEFEAQ AQGLVSETLLQLETAKRTVEILRGDVAKSVDGYKSIALELDQSRAKVNTLEVLVEKLNPDFINNNCNNSGDLVDGHRSDH VEAEICSLKSDVGRLRSAVETAEIKYQEEQIRSTVQIRNAYELMEQIKSESGQKECEFEAELKRKKADIEELKANLMDKE TELQGIMEENENLNSKLQVRTSSQSDHELRNEIKRLEHCVAELKADMMDKETTLQSISEENEMLKLERNKSEEIEAAKAA EHEALMKLGIAMQEVESSSRKAARVTEQLEAAQASNSEMEAELRRMKVQSDQWRKAAEAAAAMLSAGNNGKITERTMSLD DNSYKCSPFAEENDNDYLRKKNGNMLKKIGVLWKKPQK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 598 | 598 | 3.0E-243 | ||
| MobiDBLite | 1 | 20 | 20 | - | – | |
| MobiDBLite | 1 | 76 | 76 | - | – | |
| PANTHER | 1 | 598 | 598 | 3.0E-243 | – | |
| MobiDBLite | 35 | 51 | 17 | - | – | |
| MobiDBLite | 52 | 76 | 25 | - | – | |
| Coils | 76 | 96 | 21 | - | – | |
| Coils | 104 | 131 | 28 | - | – | |
| Coils | 210 | 230 | 21 | - | – | |
| Coils | 379 | 416 | 38 | - | – | |
| Coils | 426 | 483 | 58 | - | – | |
| Coils | 495 | 536 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0364100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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