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LotjaGi2g1v0365500.7

Overview

Field Value
Gene ID LotjaGi2g1v0365500
Transcript ID LotjaGi2g1v0365500.7
Related isoforms 8
Lotus japonicus genome version Gifu v1.2
Description Pseudo-response regulator; TAIR: AT5G02810.1 pseudo-response regulator 7; Swiss-Prot: sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7; TrEMBL-Plants: tr|A0A0B2P8M4|A0A0B2P8M4_GLYSO Two-component response regulator-like PRR37; Found in the gene: LotjaGi2g1v0365500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:86310409..86317417) extracted from Lotus japonicus Gifu genome v1.2.

TTTTCCCTTCGCTATTTCTCTACCAGTCAATCCTCTTCTTCTCCTCTTCCTTCACACATGAAAACATTCTTCTCCGGAAC AAGAACACGCAAGAAATGTTAGAACGCTTAATCGCTGACTGATTTCAATTTCCTCAACATGATTGCTATTTTTTGAAACT AGATTTGAAGCTTTGACTATTGTGTTCTTTATTGTTTTTTGATTTTTTTCTTTCTTCGAAGTTGTTGAATCGAGCTTGCG TATGGAGGCTTGGTTCTTGCCAGTGAAGCCGTCAAGGTCTGTTTCATCATCCTATCAGTTTTCTGTTTTAATTTTTGATT TATTTCTTGTTTTGATTTTACTGAAAACAATAATCAACGATTGGAATTTGGAAACGAGGCTTTAGATTGTGATTTCTGGA ATTTTTTTGGATCTGTTTGATGCAGATAAATAGAATCTTCATTGTTATATATATTTTTGATGAGGTTTTAAGTTAACTGT TTTTCAATTGAATTGAATCTGTGTTCATTTCCTAATTTCTGAAATCTTGCTAAATTGATAATATCTGTAAAGAGTGTCAG AATAATCATAACTGTTCTATAAGATTTTTAGTTTCAAACTTATATTCATTTTTCATTAGTTGTTTTTTGAAAAGGAATTG GCAAAAATCACTGAAACAAAAAGAAAATTCAAACAAAGAATATGATATTTGAGAAGCTAGCTATTTGAATTTGTGGAGTC TTTGCTGTTATCTCCATGTAAAGTGATATGTGAAGAGTCTTTCAATATATGCATTTGTAATTAGATTTTGTCAGCGGTTT TAGCAACGATGATGAGTGAGTTTAGTATTTGCATTCATTTTTCAGGGTATTGGTATTAAGGAAAGGTATTACCTTGTGCT GAGACAGAAGCTTTGAGGGTTCTTTGTTGCAGAAACAGGTTGTGATTCTGTTTCGTTAAATTTGCTGTGAATTTTTTATT TTAGAGCTTTTGATTACTATCTGGGGCATGGAGTTTGGAGGTATGGATCTATATTTTTCTATCTTATCCTCTTTGAAAAA TAATTATGTTTTTATTATCAAATCTAAATTATGTTTAGTCCGTTAACAATGATGTTGGAAAAACACCAGGTATGGGGTAT TTTGTCTCTCAGAATCATGATTTTGGAAAAAAGTGCCGACTTAACTGATATATAAGGTTGTGTTTGCAGATCTTGATAGG TGAAGGTGCTAACATACGGAGAATCCAGAATTCACTTGAGGTCGTGTGGTCCTGTTAATTCCTCACCATGTTGTTTTTTG GATGTGGTTGATATAAGCTGGTCCAATGAATAATAATGGGAAAAGAGGTTCGGGAGAACAAAATCATACGCTTTTTGAAA AGAAGAGTCGAACTAATGGAGTAGTTAATGGAGGGCTAGGCTCTGGATCATCAACTGAAGATAACACAATACTTAATAAG GTGACTGCAGCTGGAAACAATGGCTTGAGAGGACGGATTCAAATCCAAGAGAGTTTGCAGGTTTCACAACCACCTCAAGG TCCAGCAGACACATGCTGGGGGAGATTTCTCCCTGTAAGATCGATAAAAGTTCTGCTGGTGGAAGATGATGATTCAACAC GCCATGTTGTACATGCTCTGTTGCGGAATTGTAGTTATGAAGGTATTACTATTGTTTTAATGTTTAATCGTGCCTTGGAA CTTGAGTGCATGGTTATACTATCATGTTATATATGTAAGTACTACCAATATGATTGGCATGCAAAAATCATATAAATGGG AATTCATTTTCCATACCAATTTAATATACTTATTGGAAAATTCTTGCTATACTATTTAGCTTTCTTTTGGAGTTTCAACC ACTAATAGTCAGTGTCTGCATAAACTTTAGAGTGAGAGCTCAGCTGACATAAAAAGAAGATTTAGTCTATAGATGTAAAA CTGTAAAGTTTCTTATGTATATGAAGCATTTAAGTTTCAAATTTTTGATCGGTTCTAAATCTTTTGCATGTATTATGCAA CCTTGCTTTATTTTCTGTTGCAGGGTTCTTGGCTATGGATCCACTAGGGTGGTCACAGTATTGTTGTCCAATATTTGGAG TCACGTATTTATCTCTATTGCAGTTTTAGAAGATATTTTTGTATGTTTTATGTTGAAACATGGTAACTTATGCGTGGAGT GAATAGTCCTTTGTGATAGCAGTAAATTTTAAGCTGAAATCTGAGGATAATGCTACTTAGTTTGCTGCAAAGAGACCATT TTTCAATCTTTTTGCATGCAACTGTTAATAAGTAGCCAGACTTGGGCCATGGGCCTTGGGGTAGTTTTAATTGTACCTTT ATATCTGTTTTATTTTTATGTAAACGAACTGAATGTCTAACAATTAGGTCCTTAAACAATGAAGGCCGTAATTCTTAAAA TCTATTTTCTTCACATGTGGTATTTACAGTCACTGCTGTTTCCAATGGTCTTCAAGCGTGGAAAATCCTAGTAGATCCAG AAAGTCACATTGACCTTGTCCTAACGGAGGTAGCTATGCCTGTTTTATCTGGAATAGGTCTTTTGTGCAAGATCATGAGC CACCAAAGTCTAAAGAATATCCCCGTGATCAGTAAGGGCCATTCCAAAATTATACTTTGTACTAAATTTAAGTATATATT TTCAATGACTATTGCTCATTTTCTCATCTTGTTTTGTTTTACTGGTTGCGTTGACTCGCATGCAGTGATGTCCTCTCATG ATTCTATGGGTATAGTCTTTAATTGTTTGTCAAAGGGCGCAGTTGATTTTTTAGTGAAACCTGTTCGGAGAAATGAACTT AAAATCCTGTGGCAGCATGTTTGGAGAAGATGCCACAGTGTGAGTTACTTTATATTTCTGTCTCAAACATGTAATGAAAC AAATATGAGAATGTTATTTCCCAGCTGATTAAAGGATCAAATGAGGAAGATATATAGTTCATTACCTCCTTTCTAGCAAA TTGAATCTTCTTTTTGCATAGAGAAATTTGCCTTAAAGAAGCAGTAATGAATTAATGTAGCTTATCTAGTTTCTGCAGCA TGATATTTATATCGAGTTTATTCTTCAATAATCAATGCCATTACTCAGTCTGAATTAATTTACTTCCTCAGTCTAGTGGT AGTGCGAATGAAAGTGGGACACAGCCCAGAAAATTTGCAAAGTCAAGAAGTGATGATGCATCTGAAAACAATAGTGATAG CAGTGATGACAATGACTATGGAAGCAGAGGTTTAAGTGTTCAAGATGGAAGTGACAATGGAAGTGGCACTCAGGTATTGC ACAAATCTGATGACATATATATAGATTTATACTAATCGCAGTATTCTGTATCAATAGCATTTTTTGCTCATGAAAATTTG TTTCAAAATGTAAATTTCAATACTGTTTGTTAGTTTTCAAATATTGACATGAGAAGCCAGTCAGCATGGATGACTACAAG CCAAGGTATCACTGAGCCATCCAAAAGTGATGATTTATGGTTTTCAAAATTGAACTCCAGTATGTATTGAGTTTAAAAGA GTAGTAATTTCATACAAGGGAATTTAAAGAGTACTGAACTGGAGCAATTTGATATGGTTGTTTAGATTGAAATTCAGTGC AAGATCTAAATTTCTGGAGGAGTCATATGGATCTTGAAAGCGTGTTGTCTAGATACTGGGACAGACCAATGAATAATGTT ACCAAAAAAAAAAAACTATTTGGGCTGCAGTTGACAACAATAAGAAATGAAGTGATTAACACTGGTCTCTGTTATTGCTC CAAAAAAATGAACTATAATATTGTTTGTAGGAATTCCGAAATTGTTACTGCCCCATATTTATTTATTTATGTAAATGCCC AAAAATCACCGTAAGGCTTCTATTTTATGTAGAGTTCATGGACTAAATGTCTAGCTCAAGTTGGCAGTCCTCGTCCAGTT TCACCTCATAAACAACCGGTTGATGCCCCTGATAGTACATGTGCCCAAGTGACGCATACAAAACCTGAAAAAGAGAGCCA TGAACTGATTGATCATCTTGGTATGACTTTATAGCATCTATTCTTTTATTTACTTATCTATCTTGATTTCGATATTTCAC CCAAATAAGTAATTACTTACTGTCCAGATGACGTTGCAATGGGTAAAGACTTGGCTATGGGAATATCTTTGAATATGCAA CAAAAGCATCCGCTTGAGGGTCTGTCAAGCAATCCAACCGGTAAAGGGATAAATAAGATGTCTGATATAGATGGTTTGCA GATGAATAAAGGACAAAGTAATGTCTGTAAAAAGGGACAACCAGAATACAACTGTGATCAAACCAGGGCGCAGGAAAATC AGGCTATGAATGTTGTTGATGTTACTGATAGCAACAGCCCCCAGGGTGAAAGTAGAGATTTGAACACTCCAAATGGGTTT TCTGGTTTCTCACAAAGAAAAGCAAGTTCTTGTTTCCAACAACACCCATCCCTTGAACTGACTTTGAAAAGGCTAGGTGA AGTAAGAGATGTTAAAAGTGTATCAGGTGATGAATGCAGTGTTTTGAGGCATTCAGATCTGTCAGCATTCTCAAAGTAAG GAAATTTGCAATCATAACTACCTTCTAGAAGCAAACCTTGTTGCATTACATTGGTTAATAACATTTTGGGTTTTTTTTCT CTTCATTCTGCAGATATAACACTGCTTCTTCTGCTAATCAGGTGATGTTTTAGACAGTACAAAGTTTATATGTTGACGAA AATTAATTTCTTGTATTTGAATACTCGTAAATTGATATTTACTTGATATGATATGATGTTTTGCAATAAATTAAAACACA AATCCGTGTTTATACTTCTACAGTTGTACTTATTCTCAATCCATAATAAATAAATGATGAAATATAAGAAAATATGGAAT AAATAGTTCAGAAGTCACCTGGGAACTCTAAAATATTCTAAGATACAATATTGATTTTATGAGATATTTTTCATATATGC AACTGCAAGCATGAAGTAATGATAACAACATGCTGCTACCTGCTGCTGGATAACAGCGTTTGGCACCAAATATTAATCTC TTGGCCGACCCTTATGTTATCTCTATCTTTTATCAGGCTCAAACTGGAAATGGAGAAAGCTGTTCCCCACTAGACAACAG CTTTACACCGAATGCAGACACAATACACAACTTTCCATCTCATTTAAGGGGCACTCCTCCAAATCAACAGTTTAATGGGA GCAACAATAGCAATGACATAACCTCCATGAATACATATCTTGGCACCAAACCTGAAGAATTTGACAAGAAGCCAGAGTAC ACAATTGGGATTGGCTCGTTTAATTCTTCTGAACTCCAAACTGTGCAGAACAATGGTATCTCTTCATCTCAGAAGAAAAC TTCTGCTGCCAGGGAAGAATATGCAGAAATGGCTAAAGGACAAGTGCGGGGCTCTGAACAAGGATTCCAAGTCGAGCACA CTCGCCATCAGCATCACCATTATAATCACATTGCCCACCAAGCTGCTAAAGATCTTCGACCAGACCATGATCTCTCAGTG AAAAGCTCGACCAAAGCTGCTCAGCAATGTATATCATCAAATGTGCGTGGACCAGCAGAAACTAACGCTTTTGATGGAAA TGCTAATGAGAGTGATCATGGGAGTAACGGACAGGAGGGAAGCAATACCTTGACAACCAAAACGATAAATTTGGAAAACA ACCATGTGATAGCTGCAAGCTTTGAAGTTGAAGTTGGTGTCGTTGATAGGAAAAACACCATGAATGTGGCAGATGAAGAA CGAACTGCGTTGAGGGAAGCTGCCTTGGCAAAATTTCGACTAAAGAGAAAAGAAAGATGCTTTGAGAAGAAGGTAACCTA TATCTTATTTCACCGTCCATAATATGTTCACTAAAGTTCTTTGTTGCAGGTGTTTGGGAATAAAGTTTTAGTAATATCCT GCTCATTGTGTTACTATAGTTTCTACTGACTGAATTGATGGCCTTATGAGATCCTATCAAGATGGAAGGTTCTGTTAATA AAATCCAATTATACGAAAACATCCTATGAAAATATATTGACATTGAGATTATCTCTTTCTATCCCTAGTTATCTACTCTC CGTTATGGATATTTTATGCTTGTGCTAATTTATCAAATTAATTATGCTTTATCTTAAATAAAGAGGTTCCTGCCTTAAAA GCTACTTGTATGAGGTGTATGTTCTAGTCAACAACCTAACTTCATTATCAATAAGCACATGATATTGTAATATGCCAACA TAAACTTTACTTGTTTCAATATTTGGGAGTTTTGTTTACTTTTCAGGTTCGATATCACAGCAGAAAAAAACTGGCAGAGC AGCGGCCACGTATAAGGGGACAATTTGTACGACGAACTGTGTATGTGCGTTGCTCGGATTCATAGTTGATTTTGTTCTTT TGTTTCGTTTATATAAGTGCTGGGTTAACTTCTGTCCAACTTTTCCCCCCAGGTCTGATACCACAGAAGAAAAAGATAAA CAAAACGAAAACTTGGTGTCTATGGATAATTCTAGCGATGTTCCGCAATAACACTGGTTAAAATGCTGATTGCTATTTAA CTGATTTCTTCCAGTAACTGCTTCGAGCTTCTTGCTATCTGAGTTTTGCACGTTCACTTGGGAAGATGCTTGAAGGCTGT GAACTTAAATTGCCCACAGGTTGACCTATGATGAAATAAGTTTGTCATGTTAGCAGGGGCGGAGCCACCGGGGTGGCTTA CCGGTGCTCCGCACCCCCGTGAATTTTAATTTTTCTTAGCGATACTATGTAAATTTTTTTTCTAGCACCCCCGTAAACGA TAATATAAAATAAAAGTCAGTATGAATCATAAATAACATGGTGGTCCAGTGGCAAGCGTTATTGCCTTTAGTCTATGGTT CCCGTGTTCGAATCTTGCTTTCCCTGTCGAACCCATTCCCAAAAGAATACTGTGAGAATAAATTACCACTAAACTAGGTG CGACTCTTGTACTTTAATTGATGTTTTAAGTTATTTATACATTTAATTA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0365500.7) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATAATAATGGGAAAAGAGGTTCGGGAGAACAAAATCATACGCTTTTTGAAAAGAAGAGTCGAACTAATGGAGTAGT TAATGGAGGGCTAGGCTCTGGATCATCAACTGAAGATAACACAATACTTAATAAGGTGACTGCAGCTGGAAACAATGGCT TGAGAGGACGGATTCAAATCCAAGAGAGTTTGCAGGTTTCACAACCACCTCAAGGTCCAGCAGACACATGCTGGGGGAGA TTTCTCCCTGTAAGATCGATAAAAGTTCTGCTGGTGGAAGATGATGATTCAACACGCCATGTTGTACATGCTCTGTTGCG GAATTGTAGTTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCGTGGAAAATCCTAGTAGATCCAGAAAGTCACATTG ACCTTGTCCTAACGGAGGTAGCTATGCCTGTTTTATCTGGAATAGGTCTTTTGTGCAAGATCATGAGCCACCAAAGTCTA AAGAATATCCCCGTGATCATGATGTCCTCTCATGATTCTATGGGTATAGTCTTTAATTGTTTGTCAAAGGGCGCAGTTGA TTTTTTAGTGAAACCTGTTCGGAGAAATGAACTTAAAATCCTGTGGCAGCATGTTTGGAGAAGATGCCACAGTTCTAGTG GTAGTGCGAATGAAAGTGGGACACAGCCCAGAAAATTTGCAAAGTCAAGAAGTGATGATGCATCTGAAAACAATAGTGAT AGCAGTGATGACAATGACTATGGAAGCAGAGGTTTAAGTGTTCAAGATGGAAGTGACAATGGAAGTGGCACTCAGAGTTC ATGGACTAAATGTCTAGCTCAAGTTGGCAGTCCTCGTCCAGTTTCACCTCATAAACAACCGGTTGATGCCCCTGATAGTA CATGTGCCCAAGTGACGCATACAAAACCTGAAAAAGAGAGCCATGAACTGATTGATCATCTTGATGACGTTGCAATGGGT AAAGACTTGGCTATGGGAATATCTTTGAATATGCAACAAAAGCATCCGCTTGAGGGTCTGTCAAGCAATCCAACCGGTAA AGGGATAAATAAGATGTCTGATATAGATGGTTTGCAGATGAATAAAGGACAAAGTAATGTCTGTAAAAAGGGACAACCAG AATACAACTGTGATCAAACCAGGGCGCAGGAAAATCAGGCTATGAATGTTGTTGATGTTACTGATAGCAACAGCCCCCAG GGTGAAAGTAGAGATTTGAACACTCCAAATGGGTTTTCTGGTTTCTCACAAAGAAAAGCAAGTTCTTGTTTCCAACAACA CCCATCCCTTGAACTGACTTTGAAAAGGCTAGGTGAAGTAAGAGATGTTAAAAGTGTATCAGGTGATGAATGCAGTGTTT TGAGGCATTCAGATCTGTCAGCATTCTCAAAATATAACACTGCTTCTTCTGCTAATCAGGCTCAAACTGGAAATGGAGAA AGCTGTTCCCCACTAGACAACAGCTTTACACCGAATGCAGACACAATACACAACTTTCCATCTCATTTAAGGGGCACTCC TCCAAATCAACAGTTTAATGGGAGCAACAATAGCAATGACATAACCTCCATGAATACATATCTTGGCACCAAACCTGAAG AATTTGACAAGAAGCCAGAGTACACAATTGGGATTGGCTCGTTTAATTCTTCTGAACTCCAAACTGTGCAGAACAATGGT ATCTCTTCATCTCAGAAGAAAACTTCTGCTGCCAGGGAAGAATATGCAGAAATGGCTAAAGGACAAGTGCGGGGCTCTGA ACAAGGATTCCAAGTCGAGCACACTCGCCATCAGCATCACCATTATAATCACATTGCCCACCAAGCTGCTAAAGATCTTC GACCAGACCATGATCTCTCAGTGAAAAGCTCGACCAAAGCTGCTCAGCAATGTATATCATCAAATGTGCGTGGACCAGCA GAAACTAACGCTTTTGATGGAAATGCTAATGAGAGTGATCATGGGAGTAACGGACAGGAGGGAAGCAATACCTTGACAAC CAAAACGATAAATTTGGAAAACAACCATGTGATAGCTGCAAGCTTTGAAGTTGAAGTTGGTGTCGTTGATAGGAAAAACA CCATGAATGTGGCAGATGAAGAACGAACTGCGTTGAGGGAAGCTGCCTTGGCAAAATTTCGACTAAAGAGAAAAGAAAGA TGCTTTGAGAAGAAGGTTCGATATCACAGCAGAAAAAAACTGGCAGAGCAGCGGCCACGTATAAGGGGACAATTTGTACG ACGAACTGTGTATGTCTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0365500.7) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNNNGKRGSGEQNHTLFEKKSRTNGVVNGGLGSGSSTEDNTILNKVTAAGNNGLRGRIQIQESLQVSQPPQGPADTCWGR FLPVRSIKVLLVEDDDSTRHVVHALLRNCSYEVTAVSNGLQAWKILVDPESHIDLVLTEVAMPVLSGIGLLCKIMSHQSL KNIPVIMMSSHDSMGIVFNCLSKGAVDFLVKPVRRNELKILWQHVWRRCHSSSGSANESGTQPRKFAKSRSDDASENNSD SSDDNDYGSRGLSVQDGSDNGSGTQSSWTKCLAQVGSPRPVSPHKQPVDAPDSTCAQVTHTKPEKESHELIDHLDDVAMG KDLAMGISLNMQQKHPLEGLSSNPTGKGINKMSDIDGLQMNKGQSNVCKKGQPEYNCDQTRAQENQAMNVVDVTDSNSPQ GESRDLNTPNGFSGFSQRKASSCFQQHPSLELTLKRLGEVRDVKSVSGDECSVLRHSDLSAFSKYNTASSANQAQTGNGE SCSPLDNSFTPNADTIHNFPSHLRGTPPNQQFNGSNNSNDITSMNTYLGTKPEEFDKKPEYTIGIGSFNSSELQTVQNNG ISSSQKKTSAAREEYAEMAKGQVRGSEQGFQVEHTRHQHHHYNHIAHQAAKDLRPDHDLSVKSSTKAAQQCISSNVRGPA ETNAFDGNANESDHGSNGQEGSNTLTTKTINLENNHVIAASFEVEVGVVDRKNTMNVADEERTALREAALAKFRLKRKER CFEKKVRYHSRKKLAEQRPRIRGQFVRRTVYV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 39 39 - –
MobiDBLite
mobidb-lite
19 39 21 - –
PANTHER
PTHR43874
35 750 716 1.4E-275 –
PANTHER
PTHR43874:SF71
35 750 716 1.4E-275 –
Gene3D
G3DSA:3.40.50.2300
84 225 142 1.0E-30 –
SUPERFAMILY
SSF52172
85 212 128 8.82E-32
IPR011006
SMART
SM00448
87 202 116 1.6E-27
IPR001789
ProSiteProfiles
PS50110
88 206 119 40.041
IPR001789
Pfam
PF00072
89 199 111 1.7E-21
IPR001789
CDD
cd00156
90 205 116 2.40824E-27
IPR001789
MobiDBLite
mobidb-lite
211 295 85 - –
MobiDBLite
mobidb-lite
241 273 33 - –
MobiDBLite
mobidb-lite
336 369 34 - –
MobiDBLite
mobidb-lite
610 664 55 - –
MobiDBLite
mobidb-lite
622 664 43 - –
ProSiteProfiles
PS51017
706 748 43 15.269
IPR010402
Pfam
PF06203
706 748 43 2.1E-15
IPR010402

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000160
Biological process Phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0365500.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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