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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0366000 |
| Transcript ID | LotjaGi2g1v0366000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT5G60050.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9LVG9|Y5600_ARATH BTB/POZ domain-containing protein At5g60050; TrEMBL-Plants: tr|A0A0L9V6Q7|A0A0L9V6Q7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0366000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86354583..86358634) extracted from Lotus japonicus Gifu genome v1.2.
CAATAAAACAATTGACTAAAAGCAATAAGAACAACAAAATAACTAATTCATGTTTGCCAAAAAAAATACTAATTTATGCT TCTAAACCATAAACCCTTTCTTAATGAGAGATTATATATGAAGTATCACTGAGGAATCACTTTCTTTAAGAAGATTGAGT TCAATTTTCATCACCAATATCTCAATATTAATAGCGACTAATGACCTTGAATATATGTTATTGAATGCATGCTCCGACCG GTGATAGCATGATAGTGACCGAAATCGAATTCATCCAACATTTTCATTAGCAGACAGATTAGTTGCCAATCAATTTCTCT CATATAATTGTGTGTTCGACTTTCATCACCAATATGAGAGTTGTATTAATAAATGATATCTATAAGCGACTTATGATCTC AAATACATGCTTCGGCGTGTGATATATGATGATGACGGAAACCGAACTCATCTAACCTTTTCATTAGCAGACAAAAACCA GTCAAGTAGAAAAGTAGGACAGTGTGTGCACATGGCGGCAATAACCTCTGTCACTCACTCCCTCACATAAACAGTTGTAT TTATTTGTTTGGTCTCTCAAACCACGTTGTCCTTCTTGGATTCTCTCAGCTACTCCCTCAAATTTCTCACTGTGACTCAG TTTCCATCTCTTCAACTTCACTAGTTCAGTGATCTCTTCTTCACAATTGCGTTCTCTGAATTCAAATCCAATGGGTGGAG AAAACGCATTGAAATCCAGAGAGGTATCAGCGATGATAAAACAAGGTTTCATAGCAGATTCAACCTTCTCTTACTCACCT TCTAGAACCTTCTCTTCTCCTCCTCCTTCCTCAACTCGCCCGAGTCAGACTCAGTCTCAGACCCAAACCCCATCTCTGTC TCAGGCTCAGACCCTTTTTGACATGATGTCGGAGGAGCAAACCCGCGACTCCAAATTCTCCTCCGACGACCGGCGCCGGA AAATGCAAGATCGGGTGTGGAAGCTTCTGGAGGATGCGCCGTTTGGCGGCGGCGGTGGTGACGTGATGCTTACGGTGGTT TCCAAGGACGGGTTCAGGGTCTCGATGGAGGTGTACAAGAGTGTGCTCGCTAGCAAGAGCCGCTTCTTCGCCGAGAAGCT TCGCTGCGGCACCGGTCTGTCGCACTCGGTGGAGATCAGTGACTGTGACGATGTGGAAGTGTACGTGGAAGCTGTCGTTT TGATGCACTGTGAGGATCTCAAGAAGAGGTTGAGGATGATGGGTGAAGGGGTTTCTAAAGTTTTGAGCTTGCTCAAGGTA TTGAATTTCTATGGTTGAACTTGAATTGAATGATTTTGACTTGAATTAGAGACTTTTGGACTTTATATTTTGGAGTCATA GTTACTTGTCTTGTACACAATGTTTGATTTTTTCCTCTGTTGTGGTTGACTATGTTCTTGGCTATTGAGTGTGTGATTAG CTAATTGTGTTATTGTTTAGAGTTTTATGATTAATAATTCCACATTCAATGTCATAGTTAATCACATTAGTGCTTAGATG GTACTTTTTTGTTGATCTTGTTCACACATTAATCCTTAAACCATAACCTTGTGGATCCTCGCAGAGCATGTTAGTGCATA CTACCCCTTGTGCAGTCTGATTAGGATTGTTTATAGTTTTTTTGAAACTAAAGAATTCATTAAAGAAAACAAGTTGCCAT AGAGGCTATTACATCAGCATGAACCAAAGACACAACTTCCGGCGGAACCTCTTCAATCCACACAGAATTGTGGAATTTTG AGGAGTTCAGACTTTGGATTCTTTTGTTTGTTGTGTCTTATCTTATAATTAGCGCAAATTAAAATTAACCATGAGATTAT ATTTCACTAAGCCAATCCTTAATGTTCATTTGTTTTCTTTTTCTTTTCATTTTGTTTTTGTTTCATAGACCGAGACCTGT TAGTGGTTTTCATTTTTTCCCCTTCTTTTGTAGGTTTCAGCTGCTATCATGTTTGATCTTGGGGTTGTGTCATGCCTAGA ATATTTGGAAACTCTTCCTTGGACTGAGGATGAACAGGAGGAAGTTATATCTCAGCTAGGTCACTTGCAGCTAGATGACT CTGCATCTGAAGTTCTTCTTAGAGTTTCATCCGATCCATCTATGTCTTCTAGAGCTGATGACATCTTCATGAGCTTGCTG AGTGGTGTTCTAGAAGCAAAAGATGACAAAGCTCGTAGGGAAATGAAAGCTCTGCTATCTAAATTGCTTAAAGAGAATGC ATCTGATGATAATAGCTGCAGACTTGATGTTTCCAAGGACACACTTTATCATCTTTGCCACAGGTGCATCAAGTCTCTTA TCCGGTGCCTGTCCGAAGCAATCGGCCAGGATGATAGGCCGGATCGAGGGGTTTTGATGAGTGAAATAACTCGGGAAGCT GACAATATTCAGTGGATTGTTGACATTTTGATAAGCAGAAAGATAGGTGATGAATTTGTGAAAATATGGGCAGAGCAGAA AGAACTTGCTGCACTTCATTCCAAAGTTCCGATAATTTATCGCCATGAGATCAGTAGAATCACAGCACAACTATGCATCG GCATAGGAAGGGGACACATACTGGTGCCGAAAGAAATTCGATTTTCATTGTTGTCAACATGGCTTGATGCTCTATATGAA GATTTTGGATGGATGAGGAGAGCTTCTAGATCTGTTGACAAGAAAATGGTTGAGGATGGACTGAGTCAAACTATACTGAC TCTGCCTTTACTCCAACAGCAAGCTGTGTTGCTCAATTGGTTTGATAGATTTCTTAATAAAGGAGATGATTGTCCGAATA TTCGGAAGGCATTTGAAATTTGGTGGAGAAGAGCCTTCATCAGACAGTACTCAGCTGAGCCTGATAATTCCCAGTTACAA ATAACTCTATTTGATTACCCTCAATGAAAAGTTCCAAGGGACCTTTAAAGAAAAGAAAGGTAAATATTTTCACATTTGTA AATAAGAAATGACAATTTGCATTCCCTTCTTCTGCTTTTGCCTGCCATATTCAAATCAGATTTTTCATTTTTCCCTTTTC TGTATTTTGACCTGACATTAGATGAAAGCAGTTTAACTTGGTCTCTGGAGAACATTTGAAAGGTGGGAGAACCGGAAAAC ATTTATAAAATATGGAAAGACATTTCTCATGATTGCTAAAAGTTAGTTTATTAGTAATGATACTTAGACAATACACATAC AGCCATATTTTCTCTCTATCTCTTATCACATTCATTACTTCTCTCTCGTTTCTTCTTTTCTCACTCTTTGTATTTGTTAG TGTATATGCACTATGATGTCTATGAATCATTTACCATGAAGAGTTTCCACACCCGCTTCTTTCTTGCACCTGTCCTCATT ACATCTTAAAATTAAAAAAACTTTGACACCCTAACCCCCTTATTACCTCTTGAATAATGCCAAAGATGAACCTCCCTTTA GCTTACTCCCATCGCTTCCCTTCTTCTATGCTAAGTTATCTTCTTTTTCCCCTTACATCGTTTCACCTCTTTTTATCTTC TTACCTTTTATTACCTTTTTTCTTCATTGTGTTGGCCATTGAAGCTTGGTTGAGTTGTGTTGAACAGTTTAGTGCTAATG ACAATTTACATCCACTCTAGGCTTGTTTCTCTTCCTCTTCTATTGCCTTTTTTAATCATTAATTTCTTGTTCTTTCTTTC TTAAAAACAGTTGCCTTAATGCTCGCAATTTATTCAACTAGATAGTAACCCGTTTTCGTGCGATGCACGGACGAGCAATT CTACGATTTAACATAATAAATTATGTAATTTATTAAGATGAACAAATTAATTTACATACCAATAATTTGTAATTTTTTCA ATTATATACCGCGGTTGGCTAAATGACCAATGGAAATGTTTGGATCAAATAACACATGGTTCTAGGTGGACCAATCACAT TTAAGATAAGTGAAGTAGAATTTTTATATTTTATTTATTTATAAATAATTTTATTGGTTCCTTGGGATGGGCTAAGTAAC CCTCATGATAAAACCACTAATACATAGGTGACAGTAAACCGATTATTAACTT
CDS sequence (LotjaGi2g1v0366000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGAGAAAACGCATTGAAATCCAGAGAGGTATCAGCGATGATAAAACAAGGTTTCATAGCAGATTCAACCTTCTC TTACTCACCTTCTAGAACCTTCTCTTCTCCTCCTCCTTCCTCAACTCGCCCGAGTCAGACTCAGTCTCAGACCCAAACCC CATCTCTGTCTCAGGCTCAGACCCTTTTTGACATGATGTCGGAGGAGCAAACCCGCGACTCCAAATTCTCCTCCGACGAC CGGCGCCGGAAAATGCAAGATCGGGTGTGGAAGCTTCTGGAGGATGCGCCGTTTGGCGGCGGCGGTGGTGACGTGATGCT TACGGTGGTTTCCAAGGACGGGTTCAGGGTCTCGATGGAGGTGTACAAGAGTGTGCTCGCTAGCAAGAGCCGCTTCTTCG CCGAGAAGCTTCGCTGCGGCACCGGTCTGTCGCACTCGGTGGAGATCAGTGACTGTGACGATGTGGAAGTGTACGTGGAA GCTGTCGTTTTGATGCACTGTGAGGATCTCAAGAAGAGGTTGAGGATGATGGGTGAAGGGGTTTCTAAAGTTTTGAGCTT GCTCAAGGTTTCAGCTGCTATCATGTTTGATCTTGGGGTTGTGTCATGCCTAGAATATTTGGAAACTCTTCCTTGGACTG AGGATGAACAGGAGGAAGTTATATCTCAGCTAGGTCACTTGCAGCTAGATGACTCTGCATCTGAAGTTCTTCTTAGAGTT TCATCCGATCCATCTATGTCTTCTAGAGCTGATGACATCTTCATGAGCTTGCTGAGTGGTGTTCTAGAAGCAAAAGATGA CAAAGCTCGTAGGGAAATGAAAGCTCTGCTATCTAAATTGCTTAAAGAGAATGCATCTGATGATAATAGCTGCAGACTTG ATGTTTCCAAGGACACACTTTATCATCTTTGCCACAGGTGCATCAAGTCTCTTATCCGGTGCCTGTCCGAAGCAATCGGC CAGGATGATAGGCCGGATCGAGGGGTTTTGATGAGTGAAATAACTCGGGAAGCTGACAATATTCAGTGGATTGTTGACAT TTTGATAAGCAGAAAGATAGGTGATGAATTTGTGAAAATATGGGCAGAGCAGAAAGAACTTGCTGCACTTCATTCCAAAG TTCCGATAATTTATCGCCATGAGATCAGTAGAATCACAGCACAACTATGCATCGGCATAGGAAGGGGACACATACTGGTG CCGAAAGAAATTCGATTTTCATTGTTGTCAACATGGCTTGATGCTCTATATGAAGATTTTGGATGGATGAGGAGAGCTTC TAGATCTGTTGACAAGAAAATGGTTGAGGATGGACTGAGTCAAACTATACTGACTCTGCCTTTACTCCAACAGCAAGCTG TGTTGCTCAATTGGTTTGATAGATTTCTTAATAAAGGAGATGATTGTCCGAATATTCGGAAGGCATTTGAAATTTGGTGG AGAAGAGCCTTCATCAGACAGTACTCAGCTGAGCCTGATAATTCCCAGTTACAAATAACTCTATTTGATTACCCTCAATG A
Protein sequence (LotjaGi2g1v0366000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGENALKSREVSAMIKQGFIADSTFSYSPSRTFSSPPPSSTRPSQTQSQTQTPSLSQAQTLFDMMSEEQTRDSKFSSDD RRRKMQDRVWKLLEDAPFGGGGGDVMLTVVSKDGFRVSMEVYKSVLASKSRFFAEKLRCGTGLSHSVEISDCDDVEVYVE AVVLMHCEDLKKRLRMMGEGVSKVLSLLKVSAAIMFDLGVVSCLEYLETLPWTEDEQEEVISQLGHLQLDDSASEVLLRV SSDPSMSSRADDIFMSLLSGVLEAKDDKARREMKALLSKLLKENASDDNSCRLDVSKDTLYHLCHRCIKSLIRCLSEAIG QDDRPDRGVLMSEITREADNIQWIVDILISRKIGDEFVKIWAEQKELAALHSKVPIIYRHEISRITAQLCIGIGRGHILV PKEIRFSLLSTWLDALYEDFGWMRRASRSVDKKMVEDGLSQTILTLPLLQQQAVLLNWFDRFLNKGDDCPNIRKAFEIWW RRAFIRQYSAEPDNSQLQITLFDYPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 505 | 498 | 5.0E-247 | – | |
| PANTHER | 8 | 505 | 498 | 5.0E-247 | ||
| MobiDBLite | 26 | 55 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0366000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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