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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0373300 |
| Transcript ID | LotjaGi2g1v0373300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C family protein; TAIR: AT1G07630.1 pol-like 5; Swiss-Prot: sp|Q9LQN6|P2C04_ARATH Probable protein phosphatase 2C 4; TrEMBL-Plants: tr|I1LQQ6|I1LQQ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0373300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87029614..87033799) extracted from Lotus japonicus Gifu genome v1.2.
CTATCCACTTAACGTGATCTCGGAGTCTCGACCTATCCACTTAACGTGATCTTAAAGTCTCGAGAAATTAGTTTCGTTGG GCCGGCGGTGAAATACCTTAGAAAAAATAATAAAAAACCCTTATTCTGAAGTCAACGCTTTCTCTCTCATCCTCTCCCTC TTCTTCTTCTTCTCTTATCAACTTCAACCCTTCAACTTATCTTTCTTCACCAAACTGGTTTTCTCTCTCTCTCTGACACT CTCTCTTTCTATCTCTCTTCAATTTGCAGAATGAGTAACGCGTTGTAACAATCTTCAAGGAGCTTGCTATATTGATTCTC TTGATTTGTGTTTCGTTGAGATGGGTAACGGGATAGGGAAGTTGACGGTGTGTTTCACCGGCAACGGCGGTGGCCGGAAG CACGATATATCGATTTTATTCACGGAGCCACTGGATGAAGGATTGGGTCACTCGTTCTGCTACGTGAGACCCGACCCGAC CCGGATGTCGTCGTCGAAGGTTCACTCAGAGGAAACGACGACGTTCAGAACGATCTCCGGCGCTTCTGTCAGCGCCAACA CGTCAACACCGTTGTCGACGGCGTTCATGGATTTGTACTCGTACGGTTGTATTGATAGAGCTGCGGCGTTTGAGAGCTCA ACCTCCTTCGCCTCGCTTCCTCTGCAACCGATTCCGAGGAGCTTCATGAATTCCGGTACGTTTTCTGGGAATCTCGGAGC TGGAGGTGGGTTTCCGAGTTCGGGTACTTTGGAGAGAGGGTTTCTCTCGGGTCCGATTGAGCGTGGGTTCATGTCGGGTC CGATTGATCGGAGCGGGTTGTTTTCGGGTCCGATGGAGAAGGACGGCGGCGGAGAGCAGTTTCAGAGGAGCTTCTCCCAT GGCGGTGGTTTTACGGTGAGGCCCAGGACGAGGAAGAGTCGGTGGATTAAGGCGCTGAGGAGGGCGATATCGAAGACTCT GCCTCGTGGGCAGAACTCGATTGTTACTCCGATTAAAGGAGTGGCGGCGAAGGAGCCGGAGTGGATCGCTGCTGCGGCGG CGGCGGCGGAGAAGCAGCAGCAGCATAACGAGAATTTGAGTGTGAATTTGAGCAGCGAAGGTAGTTTGGAAGACGATGAT TCGATGGAGAGTCAGAATCTTCAGTGGGCACAGGGGAAAGCAGGGGAGGACCGCGTTCACGTGGTGGTATCGGAGGAACA CGGTTGGGTCTTCGTCGGAATCTACGACGGTTTCAACGGTCCTGATGCACCTGATTATCTTCTCTCAAATCTTTACAACT ACGTGCACAAGGAACTGAAAGGGTTGCTCTGGGATGATGGGGTTGCTCCAGAGAATTCGAATTTGGAAGAAACGCAAGAA GATTCGATGGTGATCGGTGATATTGATGTTGATGATGGTGTTGTTGGGAAAAATGATGATCACAGGTTTGCAGATGCTTG TGCTTGTGCAAGTGGTGATGCGGTTCCGAAGGGAAAAATAGGGAAGAATTCTAAGAAAGCTGCATCCAAGAAACGAGAGG AGAATCAGAGAAGGTGGAAGTGTGAGTGGGATCGTGAGAGATTAGAGCTTGATCGAAGATTAAAGGAGCAACTAAATGGA ACTCGATCCGGGTCTTGTAATGGTGGTTCTATTAACCATGCTGATGTGTTGGAAGCTCTATCTCGAGCTCTGAGGAAGAC AGAGGAGTCTTACCTTGATGTCGCGGATAAGATGCTAGGCGAAAATCCGGAGCTTGCTTTGATGGGTTCTTGTGTTCTTG TGATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGGGATAGTAGAGCTGTGTTGGCTCAAAAGGCTGAGCCT GATTACTGGATTGGGAAGATCAGACAGGACTTGGAGAGAATCAATGAAGAGACCATGAATGATCTTGAGTCATGGGATGC AGACACATCTAATCTTGTTCCCACTCTAAGTGCACTTCAGCTTACAAAGGATCATAGTACCAATGTTGATGAGGTAAATT TGTTTGTCTTCTATTACTGTTTTTGACCAGACTAGTATTGATTATCAGTTCTTGATTTAACAATCTCTGATTTCAATTTC AGGAAGTTTATAGAATAAAAAGAGAGCACCGGGATGATCCTTGTGCTGTGGTAAATGATCGTGTTAAAGGCTCTCTCAAG GTTACTCGAGCATTTGGTGCTGGATTTCTCAAACAGGTTGGTGTCTATTTTTGTAGATATTTCTAAATGTATTCTACTTC ATAGTTTATCTTTAGCATGAATGTCAAGGATTTTCCAAAAGGAAAGAGATAATTGATTGATCTACACATTCTATATCAGG ATTATACTCTTTTTCACATTTCTTCTGTTATCACAGGAAGTTTCTTAAATCCAGTAACCACTTTCCTTTTCCCATAAATT TGAACATTGACATATTACTCTCTTTAGATTATGGATTAACAGTGGATCTTGAGAAACTTGTAACTTAAAGCTTAGCAGTG TCTGTTTGGAAATAATCCTTCTCCAATTAATTATAAAGCCAGAATCAATTCTGGTAAGATCTGTGCCAGAATTGATTATG AGAAAATAGAAGCTGGTCCAAACATGCTAACTTGGATATCATTAGTTTTTTGGTTTGGTGCTTTGGAATGTCAAATTTGG CTAGGTTTTGTATCCATTTCTTTCAACTGAGATCAACTTCAAACTGTTGTTCTGCATTTTCTTATTGTTGGTCATCTTGT GAATGTTTTGCAGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTATGTAGGAAACTCTCCTTACATCA CCTGCCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATCTTGTGCTCCGACGGGCTCTACCAG TACTTGTCGAACGAAGAAGCGGTAGCCGAAGTTGAGCTTTTTATCACGTTGCAACCCGAGGGAGACCCGGCTCAGCATTT GATTGAAGAGGTGCTGTTCCGCGCTGCAAAGAAAGCTGGTAAGTGGTAACAATAACAACAAAAACTTCATTTAAAACATC TCATAAGTGCATTTTACAAACTGATATGATGAGGGATTTTTACTGATCTTTAATTTTTTCTGCCTTCTTAATTTTCAGGT TTGGACTTTCATGAGTTGCTAGAAATTCCACAAGGCGATAGGCGTCGTTACCATGATGATGTTTCCATCATTGTTATTTC TTTGGAAGGAAGGATATGGAGATCATGTGTATAACCATTTTGAGAACCATAATCAAAAGAAAAAAGAAAAAAAGAGGATG TACACTCCTTCAGGATCCTCCTTGCTCACCTTCCTTGAAATAGCACCTAAATTATAGCATGTTTTGATTGTTGGTGGCAG AGTTCAAATTAGGGTAACTCCTGAAGCTACACAACGAGTTTCCACCGCAGAACCAAACATGCTATGCTATTTAGTTTTCA GGCGGGTGGCAAGGATTGTAAAGATGTAAAAGGTGGATTTTGTTGATTATAACTTTTCTCCCACATAAAATGTAATTTTT GTAATAAAAAGCCATTCCTTAAAAAATCTCTTTCATGGTGCACAAAGCACTAGCAACCTCCATCACTTTCTGCAACCCTG ATTGGCAAATTGCAAACCTAAGTCATCTGATGCATCAGCATCTTTTCAATTTTCAAAATTAAAATGCACTCAGTGACATA TTCCAAATCAAAATGCCTACAGTAATGCTCTGAGCTCATGAAGGTTATGTTTGCCTTTTCAATTTTATTTGGATCAAGCA CTATTTGCAATTTGGCTCCCAAAGCATTATTTTTTGACTTGCATTGTATTCCTTCAGCAACATGGTCTTTTTTTTTTCTT CCTCCTCTTACGTGTGTTCAATTTAAACAAGATGCTTTATTCTCTCATTTCTAATTTCTGATTAAAATACAAACATATTG GTGGAATTTCGTATCAGGCACGTTGTGCATCAAAATCAACTTGAATTTTGGATTTTGACCTTAGTTGTTTTTTCAGCGTT TGAGGGTTGACAATGCATACAAATAACAAATAGTGATGCTGATTATTGAACCAATGAAATGGTTCAATGAATAATGAACT CAAAATGAGCTACATGAACATATTCAAGTCCATTTCATGCATCACCACATAAACAATTAGCAAAAAAATTCTCTAGAAGA TTTTCTAGAACAAAGGTAAATAAAAG
CDS sequence (LotjaGi2g1v0373300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAACGGGATAGGGAAGTTGACGGTGTGTTTCACCGGCAACGGCGGTGGCCGGAAGCACGATATATCGATTTTATT CACGGAGCCACTGGATGAAGGATTGGGTCACTCGTTCTGCTACGTGAGACCCGACCCGACCCGGATGTCGTCGTCGAAGG TTCACTCAGAGGAAACGACGACGTTCAGAACGATCTCCGGCGCTTCTGTCAGCGCCAACACGTCAACACCGTTGTCGACG GCGTTCATGGATTTGTACTCGTACGGTTGTATTGATAGAGCTGCGGCGTTTGAGAGCTCAACCTCCTTCGCCTCGCTTCC TCTGCAACCGATTCCGAGGAGCTTCATGAATTCCGGTACGTTTTCTGGGAATCTCGGAGCTGGAGGTGGGTTTCCGAGTT CGGGTACTTTGGAGAGAGGGTTTCTCTCGGGTCCGATTGAGCGTGGGTTCATGTCGGGTCCGATTGATCGGAGCGGGTTG TTTTCGGGTCCGATGGAGAAGGACGGCGGCGGAGAGCAGTTTCAGAGGAGCTTCTCCCATGGCGGTGGTTTTACGGTGAG GCCCAGGACGAGGAAGAGTCGGTGGATTAAGGCGCTGAGGAGGGCGATATCGAAGACTCTGCCTCGTGGGCAGAACTCGA TTGTTACTCCGATTAAAGGAGTGGCGGCGAAGGAGCCGGAGTGGATCGCTGCTGCGGCGGCGGCGGCGGAGAAGCAGCAG CAGCATAACGAGAATTTGAGTGTGAATTTGAGCAGCGAAGGTAGTTTGGAAGACGATGATTCGATGGAGAGTCAGAATCT TCAGTGGGCACAGGGGAAAGCAGGGGAGGACCGCGTTCACGTGGTGGTATCGGAGGAACACGGTTGGGTCTTCGTCGGAA TCTACGACGGTTTCAACGGTCCTGATGCACCTGATTATCTTCTCTCAAATCTTTACAACTACGTGCACAAGGAACTGAAA GGGTTGCTCTGGGATGATGGGGTTGCTCCAGAGAATTCGAATTTGGAAGAAACGCAAGAAGATTCGATGGTGATCGGTGA TATTGATGTTGATGATGGTGTTGTTGGGAAAAATGATGATCACAGGTTTGCAGATGCTTGTGCTTGTGCAAGTGGTGATG CGGTTCCGAAGGGAAAAATAGGGAAGAATTCTAAGAAAGCTGCATCCAAGAAACGAGAGGAGAATCAGAGAAGGTGGAAG TGTGAGTGGGATCGTGAGAGATTAGAGCTTGATCGAAGATTAAAGGAGCAACTAAATGGAACTCGATCCGGGTCTTGTAA TGGTGGTTCTATTAACCATGCTGATGTGTTGGAAGCTCTATCTCGAGCTCTGAGGAAGACAGAGGAGTCTTACCTTGATG TCGCGGATAAGATGCTAGGCGAAAATCCGGAGCTTGCTTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAAGGGGAA GATGTTTATGTGATGAATGTGGGGGATAGTAGAGCTGTGTTGGCTCAAAAGGCTGAGCCTGATTACTGGATTGGGAAGAT CAGACAGGACTTGGAGAGAATCAATGAAGAGACCATGAATGATCTTGAGTCATGGGATGCAGACACATCTAATCTTGTTC CCACTCTAAGTGCACTTCAGCTTACAAAGGATCATAGTACCAATGTTGATGAGGAAGTTTATAGAATAAAAAGAGAGCAC CGGGATGATCCTTGTGCTGTGGTAAATGATCGTGTTAAAGGCTCTCTCAAGGTTACTCGAGCATTTGGTGCTGGATTTCT CAAACAGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTATGTAGGAAACTCTCCTTACATCACCTGCC TACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATCTTGTGCTCCGACGGGCTCTACCAGTACTTG TCGAACGAAGAAGCGGTAGCCGAAGTTGAGCTTTTTATCACGTTGCAACCCGAGGGAGACCCGGCTCAGCATTTGATTGA AGAGGTGCTGTTCCGCGCTGCAAAGAAAGCTGGTTTGGACTTTCATGAGTTGCTAGAAATTCCACAAGGCGATAGGCGTC GTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA
Protein sequence (LotjaGi2g1v0373300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNGIGKLTVCFTGNGGGRKHDISILFTEPLDEGLGHSFCYVRPDPTRMSSSKVHSEETTTFRTISGASVSANTSTPLST AFMDLYSYGCIDRAAAFESSTSFASLPLQPIPRSFMNSGTFSGNLGAGGGFPSSGTLERGFLSGPIERGFMSGPIDRSGL FSGPMEKDGGGEQFQRSFSHGGGFTVRPRTRKSRWIKALRRAISKTLPRGQNSIVTPIKGVAAKEPEWIAAAAAAAEKQQ QHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYNYVHKELK GLLWDDGVAPENSNLEETQEDSMVIGDIDVDDGVVGKNDDHRFADACACASGDAVPKGKIGKNSKKAASKKREENQRRWK CEWDRERLELDRRLKEQLNGTRSGSCNGGSINHADVLEALSRALRKTEESYLDVADKMLGENPELALMGSCVLVMLMKGE DVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMNDLESWDADTSNLVPTLSALQLTKDHSTNVDEEVYRIKREH RDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCLPYLKHHRLGPKDKFLILCSDGLYQYL SNEEAVAEVELFITLQPEGDPAQHLIEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 42 | 713 | 672 | 6.7E-188 | – | |
| PANTHER | 42 | 713 | 672 | 6.7E-188 | ||
| MobiDBLite | 251 | 271 | 21 | - | – | |
| ProSiteProfiles | 259 | 706 | 448 | 42.509 | ||
| SMART | 260 | 704 | 445 | 4.5E-73 | ||
| SUPERFAMILY | 273 | 707 | 435 | 1.44E-49 | ||
| CDD | 435 | 706 | 272 | 9.58437E-45 | ||
| Pfam | 436 | 662 | 227 | 1.3E-27 | ||
| Coils | 508 | 528 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi2g1v0373300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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