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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0386100 |
| Transcript ID | LotjaGi2g1v0386100.2 |
| Related isoforms 11 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G75500.1 Walls Are Thin 1; Swiss-Prot: sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1; TrEMBL-Plants: tr|I3SVL6|I3SVL6_LOTJA WAT1-related protein; Found in the gene: LotjaGi2g1v0386100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88199941..88205777) extracted from Lotus japonicus Gifu genome v1.2.
CTCATTATAGATTATTGATAAACAAACTGCAATTAATATAGGGGACCCTTAATAAAGATCTCGTATCTTCCACTTCCAGA CAGTTTCTGCCTCTTGCCCCTTTCTTTTGGTCTACCAGTTCTAAAAGATTGATCTCCCAAATACCTGGTTCTCTGTGTGG CGTTGAATCATCAGTTTTCACAATTCAGTACCCAGGAATCAAAGAATATGGTAGCTGAACGAGCTAAGCTGCACTTAGCT TTAACGTTTTTACAGTTTTGTTATGCAGGAAATCACATATTTGTGAGGATTGCACTTGATACAGGCGTCAGCAAGCTTGT GTTTCCTGTCTATAGAAACATCACTGCTCTTCTTCTTCTGGGTCCCCTCGCTTATTTTTCAGAGAAGTAGGCACTTCAGT CCTATCCTATACCATACATACATGAATTCTTTCACATTCCCAGTCTCAGCTATCTCACCTTTTTTCTTTTTCTTTTTTTG GATCTGTTTGTTTCCCTCTTTGTAAGGAAAGACAGGCCATCAATAACCGGTTACTGTCTACTACAATTTTTCCTTCTAGG ACTTGTTGGGTATGTATCATCTTTCCATTAAGCTACTCCACTGTATCAATAAATTGACAATGTATGTGTAACTTAAATGC TAATTTTGATTCTTGCAGAATAACATTGAAAGAAGGATTGTACCTTTTGGGTTTGGATAACACTTCACCTACCTTCACTT CTGCTATGCAGAACTCTGTTCCAGCTTTGACCTTTCTCATGGCTGTCATACTCAGGCAAGCTATGAAGTTCTTACTTTTA AGTGCATGTTTGATAATTCTTTCACTATTGATTCTACAGCTAAAATTAATTCTGAGAATAAGCTTCCGTGAGTAGCTTTT GAGTGTCAGAGCTATTCTGATAAAAGAGAAGTTGGTCCATATATTAAAATATTTGTAGAAATGCTTGTATAACATTGTTC AATTATACATGTGAAATGCAGATATGAGAGTGTGCACTTCAATAGGATAGATGGTCTGGCTAAGGTCCTTGGAGTCCTTG CTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGGCCTACGATTTATACGCCAAATTTAGCACAGCATCAGGAG CAATTCTTGTCTGTACTCAGAGATGTCACAGCAAAAAACATGAACATGGGTGGCATTTATCTTATTGGTCACTGCTTATG TTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAACTACTCAGCCCCTCTCACAGTTTCTGCGTTTACTTGCT TCTTTGGTATTGTGCAGTTTATAACAATTGCAGCCTTTTTCGAGAAGGATCCCAAATCCTGGCAACTCAATTCTAGTCAA GAGATCTACAGCATTTTGTATTCGGTTTGTAAATCAAACTTAGTTGGGTTATTCACTAGCATGTTGCTCTCTATGTTCAC AACTAATATCAGTTTTCTCTATGAGCTGCTTCTACCTCCTTACTTAATTTAGTGATCATAATTGATTACCTTGACATCAA TAAAACTCATTTTAACTGTTCGGATCTATTATGTAACTAGTTTTCATGTTACAAATTACATGTTTAAGGAAGCCAAGTAT AACAAATATGATGATAACAAAATAGACTTGTTTGTATCAGGGTCTGGTGTTTTCAGGGCTGGCAGCAGCATTACAGATAT GGGCTATTGGCAAGGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCATTACAGACATTACTTGTAGCCTTGATGTCATCC ATTGTTTTTGGAGAAGATTTCTTCTTGGGAGGGTGGGATGTCTTGATTCAAGCTGCTTCAATTTCTTTTTGTTATCTTAA AACTTTTCTAATTGCAAAATATGCTTCCCCCTAGAGGGAGTTCTAAACTAAAAGTTGGATTATCTGAGATTTGTTTATTA GTTATCCAAAGTGCCTTTGACTTATGCTATATAAATCTAAATATTTTCAATTTTGAGGTGCAGGATTATTGGAGCTTTCT TAATTATGACGGGCTTATACCTTGTTGTGTGGGGAAGAACTCAAGAAACCAAGTCTGCCAAAGAGTACATGAAAGTCCCC ATTGAGTCTGAGAATCACCCGGAAGCTAAAAGTGAGAGTGCTTCTCTCATGCAACAATTGATTCCTACACAAAATGTTTA GAAGATAGAGTTGAAGAATTTATATGATTGTAAAACTGTAAAAGTCCTTTAAGGTGACCAAATAATGCAACATTTATTTG TTGCAGCCACGTTATGATTTGTTTCACCAATTCTTGCATCCCTCTACTATTTTTTTTTTTTAATAATTTGTAATTTATAC ATAATTTTTTTATAATTAAACAACTTATAGAAAAATGTTATTGTGTTGTTATTCTTTCACACCTCATTTACTCTTTTATT CCATATCTACCCATTGTATATTCTTTTCTCGTCACATTACCCATAATATCTCATATTTATCTCTCTTTTGCTCTTATTTC TCTTTTTCGGGTGTGGGTGAAATAATTGTGAATAAATTATCATTGTAAGAAAAGAAAGAATAAGAGGGGTTTGGTTTTTT TTTTGTAAACTCATGGTTACTATCGCTTGCGAGTGCTCGCACTAAGTGATAATCATCGTCACAATATGCGTTTTATTCTC ATAAATAAGAATTAATTCTCAAACCTAATACTTAAGGAACGAAGTGAGCTAACCACTACTCACACTTTATGGTTAATGAA GGGCTTGGTAAACCAGTAAGGTAAATGAAGACAGCAAGGACTATTAACATAGCAAACACTAAATGACATTCTAATTAAGA TTTTAGTAATCGTTGACAATAATAAGTGCATCCAGGCATCTTTGAAGGAAACACCGCCATCTTTCTGAATGAATCAAAAT CCAGTAACATAACATTGTTGGTTAACCAATCAAATATTCAAAATAAACTTTGAAGGCTTTGCTCTCGAGGAGATTAGTAT AATGACTATCGACTTTGAGATAACTTGGAAAAAAATATCAACTATAATTTTAATTAATTGGTTACAGGCGTGTTTAGCGT GTTGGTCCAAATTGGGTGTTCTATGGGAAAACATGGATTGATTTTTATTAATTTTATGACAGTAAACATGGAGTGGTTGA ACTATTGCAACATGTCAGGCTTTGACTTCAAATGCCCTTCCTTCACTTTGGGGTGAAATGGAGTGGATGAAAGATTGGAT TGAGGAGTGTAGCTAATATTCAATGGCGCATCACAATCACATGCACGCAAGCAATCCAATTACTAACAGTAGATTAGAGT GTCCATTAACATTTTTGACCCATAAAGCGACAGAAACTATTTATAGATTACTAATAAACACATTGTACTTTGTTTTCTTT TGTCACGACTTACAAGTAGGTAGAACTAAACAAGATTGCAATTATTATAGATCTCTTATCTTCCACTTCCAGACAGTTTT TGCCTCTTGCCCCTGGTCAACCAGTTCTAAACATTGATCTCCGAGTACCTGCTTCTCTTTTTGGCATTGAACCATCAGTA TTCACTATTCAGTACCTGGGAACAAGAGAATATGGTAGCTGAACGAGCTAAGCTGCACTTAGCTTTAACGTTTTTGCAAT TTTGTTATGCAGGAAACCACATATTTGTGAGGATTGCACTTGATTCAGGCGTCAGCAAGCTTGTATTTCCTGTCTATAGA AACATCACTGCTCTTCTTCTTCTGGGTCCCTTAGCTTATTTTTCAGAGAAGTATGCACTTCAGTTCTATACCATATATAA ATGAATTCTGTCATGTTCCCAGTTTCAGCTATCTTACCTTTTTCTTTTTCTTTTTTGGATCTTATTGTTTGCCTCTTTGC AAGGAAAGACAGGCCATCAATAACCAGATATTGTCTTGTCCAATTTTTCCTTCTAGGACTTGTTGGGTATGTATGATCTT TCCATGAAGCTACTCCACTGTATCAATTAATTGGCAATGTTTGTGTAACTTAAAAAGTATTAATTTTGATTCTTGCAGAA TAACATTGAAAGAAGGGTTCTACCTTTTGGGTTTGGATAACACTTCACCTACCTTTGCTGCTGCTATGCAGAACTCTGTT CCAGCTCTGACCTTTCTCATGGCTGTAGTACTCAGGCAAGCTATAAAGTTCTTACTTTAAATCCATGTTTCAAAGCTCTT CTATAATTGATTCCAAAGCTAAAATTAATTCTGAGTATAAGTTTTTGTGAGTAGCTTACGAGTGTCAGAATTATTCTCGA AAAAAAAAAGTTGGTCCAGTAAGACGCTTACAAAGTATATGTAGAAATACTTATATGACATTGATCAATTATACGTGAAA TGCAGATATGAGAGTGTGCACTTCAATAGGATGGATGGTCTGGCTAAGGTTCTTGGAGTCCTTGCTTCTGTTGGAGGAGC TTCAATCATTACCCTTTACAAGGGACCTACAATTTATACGCCAAATTTAGCACTGCATCAGGAGCAATTCTTGTCTGTAC TCAGGGATGTCACAGCAAAAAACATGAACATGGGTGGCATTTATCTTTTTGGTCACTGCTTATGTTGGTCTGGTTGGATT GTGATGCAAGCATTTGTTCTGAAAAATTACTCAGCTCCACTCACAGTTTCTGCGTTTACTTGCTTCTTTGGTATTGTGCA GTTAATAACAATTGCAGCCTTTTTCGAGAAGGATCCAAAAGCCTGGCAACTCAATTTTAGTGAAGAGATTTACAGCATTT TGTACTCGGTTTGTAAATCAAACTTAATTGGGTTAAAATTCACTAGCATCCTTCATTAGCATGTTGTTCACTTCATGTTA CTATTTCTACCTCTTTACTTAATTTGGTGATCCTAATTGGTTACCTTGACATCAATAAAACTTATTTCAACTATTAGGAT CTATTATGTAACTAGTTTTATGTTACCAATTACATGTGAAACAAAGCATACCAAGTATTTGATAAAAAAAATAGGCTTGT TTGTATCAGGGTCTGGTGAATTCAGGGCTGGCAGCAGCATTACAGATATGGACTATTGGCAAGGGAGGGCCAGTGCTTGC TTCAATTTATCTGCCCCTACAGACATTACTTGTTGCATTGATGGCATCCATTGTTTTTGGAGAAGATTTCTTCTTGGGAG GGTGGGTTGTTGTGATTCAAGCAACTTCATTTCTTATTGTTATCTTAAAACTTTTCTAATTGCAAAATATGCTTCCACCT ACAGGGAGGTCTAAAGTCTAAACTAAAAGTTGGATTATCTGAGATTAGTTCATGCGTTATCCAAAATGCCTTTGGCTTAT GGTATATAAATCTTACTATTTTCAATTTTGAGGTGCAGGATTATTGGAGCTTTCTTAATTATAACCGGCTTATACCTTGT TGTGTGGGGAAGAAGTCAAGAAACCAAGTCTGCCAAGGAGTGCATGAGAGTCCCCATTATTGAGTCAGAGAAACATCCGG AAGAAAAAAGTTACACTGCTTCTCTCATGCAACAATTGATTCCTACACAAAATGTTTAGAAGATAGAGTTGACTAATTTG TATAATAGTAAAACTGTCAAAGTCCTTTAAGGTGACCAAATATTGCAACATTTTTTTGTTGCAGCAGGGTTATGATTTGT TTCACTAATTCTTGCAACCCTCTACTTTTTTTTTTTATAAATTTGTAATTTATACATATTTCTTTGAGTAAAATACACTC ACCCCCCTCAAGGTTTGTGAGAATAACACTTAACTTCATTCTTATTCAAAATATACACTCCACCCCAATAATAATCTCAT AATTACACTTAGCTCAATTCTTCTCTGAAATCTTCACTCCACCCCACCCCTTTAACACCATCCAAAAGATGCTAACG
CDS sequence (LotjaGi2g1v0386100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGGTCTGGCTAAGGTTCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGACCTAC AATTTATACGCCAAATTTAGCACTGCATCAGGAGCAATTCTTGTCTGTACTCAGGGATGTCACAGCAAAAAACATGAACA TGGGTGGCATTTATCTTTTTGGTCACTGCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAATTAC TCAGCTCCACTCACAGTTTCTGCGTTTACTTGCTTCTTTGGTATTGTGCAGTTAATAACAATTGCAGCCTTTTTCGAGAA GGATCCAAAAGCCTGGCAACTCAATTTTAGTGAAGAGATTTACAGCATTTTGTACTCGGTTTGTAAATCAAACTTAATTG GGTTAAAATTCACTAGCATCCTTCATTAG
Protein sequence (LotjaGi2g1v0386100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGLAKVLGVLASVGGASIITLYKGPTIYTPNLALHQEQFLSVLRDVTAKNMNMGGIYLFGHCLCWSGWIVMQAFVLKNY SAPLTVSAFTCFFGIVQLITIAAFFEKDPKAWQLNFSEEIYSILYSVCKSNLIGLKFTSILH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 127 | 127 | 4.2E-71 | ||
| Phobius | 1 | 54 | 54 | - | – | |
| PANTHER | 1 | 127 | 127 | 4.2E-71 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Phobius | 55 | 76 | 22 | - | – | |
| Phobius | 77 | 81 | 5 | - | – | |
| Phobius | 82 | 105 | 24 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 106 | 142 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0386100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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