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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0386500 |
| Transcript ID | LotjaGi2g1v0386500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G51070.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SD39|PMTR_ARATH Probable methyltransferase PMT27; TrEMBL-Plants: tr|G7KG99|G7KG99_MEDTR Methyltransferase PMT16, putative; Found in the gene: LotjaGi2g1v0386500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88242466..88247299) extracted from Lotus japonicus Gifu genome v1.2.
GCATTGTCAAATGAATCCTTAACATAGCAACCAAACATTTTCAACAAATTCCCTACTCCTACTCTTTAGGATCATCGAGA CATTCCAACCATCTTGGAATATTTCCTACTCTTTCAACCAATCTTCACTTCACATGCGTGTCTCCCTCCACAAACATCTC ACCCAAACTCTCTCGCTCTCTGCATCCATGCAGTCTCACTTTCATAATCTTCTTTAACAAATTAGGACCCAATCCTAATT CCCCTCTGAAGACAGACACACACACACTAACTCTTATGGCTCTGTTCAAGGCACGGAACAATAGGAGATCATCATCACCT TCTTACGTATCAACCTTAACAATATTACTATTCATCGCACTGTGTGTTTTTGGTGTATGGATGCTAAGCTCCAGCTCTCT AGTCTCACCTCAAACACAGAGCGATGAGAGTACCACCACGCGCACGGCCATCGACACCTCTTCAACCACCGATACTGATT TCTCTTCCTCGCAAGACAACCCTGAAACCACCACCATAAAAACAGATGATTCAGCTGAAACGACCACCAAAAGTGAAGAA CAAAAGAATGATGAAGTCTTCAGAGACAATCCTGGTAATCTTCCTGATGATGCCATTAAGTCTGATGACAAAAACTCAAA CAATGAGCAACATAAACAGCAGAGTGCCATTAGTGATGCTCAGATATCAGAGGAAAGCACGTTAACCCAGAAAGAACAAG CCTCCACGATACATGAAACGGTTTCAGACAAGGATCAGACAATTTCTGAGTCAGAGAGAGTTGAGCAAAGTGGCAATGAA GATGGAAATAAAAAGGAGGAAGAAGAGAATGCCAACACTCAAGATTCTACAGAATCTGTTAATGCAGCTGAAAATCAAGA ACAAGGCACTGAACAGCAACAAGATGCTGTTCAGAGTTTTGACACTAACAACAATGAAGATGAATCAAATAAAGAGCAGT TAAGAGAGGACAAAGGGGAGAATGAGACCGCAGAGAAAGATGGGCAGATGAAATCCAATGAAGATGGAAATTCTGATTCC AAAGCAGGTGAAAGCTCTCAGGTTGAGCCAGAGAAAAATGAGAATCAGAAAGTCCAAGATGAAAGTGAAGAAACGCAGAA GCCAAAAGCAGAGAAGAAAGGAAGCAAGTCGAACAAGAAGTCATGGAAAACGCAAGCAGATCAGTCACATAGCGAAAAGA AGAGACAGAAGGATGAATCAGAAACTCCAGAGAAATTGCAAGAGCACGAGTGGTATCTCTGCAATGTCACGGCAGGGGCG GATTACATACCGTGTTTGGACAATGAAATGGCTATCAAAAAGTTACGTAGCACAAAACATTTTGAGCACAGAGAAAGGCA TTGTCCGGAAGAGGCACCCACTTGCCTCGTGCCAACTCCCAAAGGTTACAAAAGATCCATTGAATGGCCAAGTAGCAGAG ATAAGGTGATTCAAAGGCAGTTCTAAATTGGATATTGGAGACTTTGATATCTTCAAAATTAAAACTTTCTTTATTGTATT TCAAAACAGATATGGTATCACAATGTACCTCACTCCATGCTAGCAGAGGTGAAGGGACACCAGAATTGGGTGAAGGTGAC AGGTGAATTCTTAACATTCCCTGGTGGTGGCACCCAGTTCATTCATGGAGCTCTACACTACATTGATTTTCTTCAAAAGG TAATCATAACAGCATTTTCTAAATTTTGTCTTAGTTAATACTTACTACTTAGTTAGCATGCCGAACACATGTTGGCTCAA TCGGTAAGGATGAGGCATTTCCTGGGAGGAAATTGCGTTCGACTCTCGCAGCCGATGTGAGGGTTGTGTCAGTGGGTCAC TATAAGCGACTTATGGTCCTGTAAGCATCCTTTGACCAGTGGTGGTGACGGAAGCCGAACCCACCCAAAGTTATTCATCG GAATAAGTTATCACTAGCAAGCAATATTTTATAATATCATTCATGCATTGCAGGCTGAGGCTGGAATTGCATGGGGAAAG CACACCAGGGTGATCTTGGATGTTGGGTGTGGGGTTGGTAGTTTTGGAGGATACCTATTTGAAAGAGATGTTGTTGCAAT GTCTTTTGCACCCAAAGATGAACATGAAGCACAAGTACAGTTTGCCCTTGAGAGAGGCATTCCTGCCATATCTGCTGTCA TGGGTTCTACAAGATTGCCATTCCCTAGCCGTGTGTTTGATCTTATACATTGTGCACGTTGCAGAGTACCTTGGCATGTA GATGGTTGGTTTCACTCACCAACACTTTTCTTGAGCTTGAATTTGTCATTTGATTTCATATCCATAATCAACAATGGCTT TATTTTGTGCTGAACATATTTAGTTGCTGAGAATTGTGAAACTCTGTTCTAGGTGGCATGTTGCTTTTGGAATTGAATCG GCTTCTGAGACCGGGTGGTTATTTTGTTTGGTGTGCTACTCCCGTGTACCAAAAGCTCGAAGAAGATGTCGAGATATGGA AAGGTAGGATTAAACTTCATATCTTTGCTGTTACAAGAAGGACAATTCTACAGTCACTGACATCTTGTAATTTCTACTAG AAATGTCCTCACTAACAAAGAAAATGTGTTGGGAGCTTGTCACTATCAACAAGGATGAACTGAATCATGTTGGCGCTGCC ATTTACCGCAAACCCACTTCCAATGAATGCTACGACAACCGGGAGAAAAACCAACCTCCAATGTGCAAGGATGATGACGA TTCAAATGCTGCCTGGTAAATCTCTATTATTGGCAAATGAACAAAATGACTGTTTGACATGTTCTAAAGACTAAAATAAA AATAGTACATGTTTGGAAGTCCTTCCAAAATTGATTCTAAAATCAATTTCGAAAATAAGTTTTTGTGTAACTTCTGAGAT TCAAAAATTAATTACGACAAAAAGGAAGTTGATCCAAACATGTTAGTAGTTGATTTAGAAGGAAAATACATCATAACAGT ACTTCTAATTTGGATTGACCAAATGTATTGTATTACAGGTATGTACCTCTGCAAGCGTGCATGCATAGAGTGCCTGAAAA CCAGGCTGAGAGAGGGGCCAAGTGGCCTGAAGTTTGGCCTCGTCGAGTGAAGAAAGCCCCGTATTGGTTAAACAGCTCAG AGGTTGGGATCTATGGAAAACCAGCTCCTCAAGATTTTACAGCAGACACTGAACGTTGGAGAAACATTGTGGATGAGTTG AGTAACATTGGAATAACTTGGTCTAATGTGAGAAATATCATGGACATGCGAGCTGTCTATGGGGGGTATTGCCTTCAACT TGGAGAACAACTATCATAGATTAGAACTTAATATGCAATACTTAGTTTTTGTAATACTTAGCCATCTGCGTGCAGATTTG CAGCAGCTCTGAGGGAACTTCCTGTTTGGGTATTCAATGTTGTGAACATAGATGCTCCGGATACACTTCCCATCATCTAT GAGAGGGGTCTTTTTGGGATATACCATGATTGGTGTGAATCCTTCAGCACATATCCAAGAACTTATGATCTACTGCATGC AGATAATCTTTTTTCAAAGCTAAAAGAGAGGTATGTATGGAAGTAGTGATCCTTCAACCCTTTTCACCTATTCTAGAGAA ATTGCACCAAAATGATCTCCATCTGTTATTTTGGCTCCTCAGGTGTAAACTTATTCCTGTTATGGCAGAGGTGGATAGAA TAATCAGACCTGGAGGTACGTTGATTGTGCGTGATGAACCGAACACCATCAAAGAAGTGGAAGCTCTGTTAAAATCTCTA CACTGGGAAATAACTTACACAAAAGAACAAGAAGGCATGCTCTGTGCCAAGAGAGGCACTTGGCGACCTGACTCTGCAGC TTTGTCCTGATAATGGCCACAACACTCGTGCTGTAACTCAAGGCTCCTTTTCAGATATAGTTGTGCAGCGGCACTGACAT GTATATGGCATTCTATCCTCCTTCTATAGCACAACATTTGTCCGGAGCACGTCACACTATTGTTTTTTTCATCACACATG TATCTCAATTTTCGATTTAACTACCCCAGATTTCATGCATGATACACCAACCTGCAGGTTTAGATTTAGTTGTCAATACA ACCCGTCTTGTTATTATATTCTGTACTTAAATTTCCTACTGCAATAGATTTCTTAAATCAACTATTAGTTTGAATAGTAG TTCATAAGACAAGATAGTTTGACCTTGGCTCCTTCAAGGCCTATAGAGTTCCTCTTGGAAACAATATGTTGCACTTCTTG GATGAAGTCATGCCATGATTTGAGATCAATTCATCGAAACAATAATCAGAATTTTTTTTTTGTTGAGTTCGCAGATTGTG GTTGACAGACTTCATGTTAGAAATTGCCATTTTTTTTTGGTTTTCTAAAACTTCTTTAAACTCATAAGCCACCTTCAAGC ATATTGAAATTCAAAGTTTCATGTTAGCAATTAACAATGTGATCAATTAGAGCCCAACCTCTCGAGAGTCCTACTTTTAT ATGCAAAATGATGCAATTCTTTTATGAAATTTCATGTTTAGACTAACTTTGTGGGTATCTCCATTATAAATCTTCTTACA GGTAGACAACACCTTAACATTTAAACATGAATGCTGCATTCTAATGGACTTCAACTCTTCAAGTACATGAAATCCATGAA ACTAATGAAGTACTAAATGTTGTGATGTTGTAAAGATGAAAGCATCCTTTTTTTTTTTTCAAATGCAATATCAAAGTCTC AGTATACTGACACTGTCAAGTTCTTTAACAATTCAATCTAACTATTTATAATAAATTAAAACCGAGATGCAGAATATAAA TGAATAAACTAATAAGAATAATCCCATGTTTTTG
CDS sequence (LotjaGi2g1v0386500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTGTTCAAGGCACGGAACAATAGGAGATCATCATCACCTTCTTACGTATCAACCTTAACAATATTACTATTCAT CGCACTGTGTGTTTTTGGTGTATGGATGCTAAGCTCCAGCTCTCTAGTCTCACCTCAAACACAGAGCGATGAGAGTACCA CCACGCGCACGGCCATCGACACCTCTTCAACCACCGATACTGATTTCTCTTCCTCGCAAGACAACCCTGAAACCACCACC ATAAAAACAGATGATTCAGCTGAAACGACCACCAAAAGTGAAGAACAAAAGAATGATGAAGTCTTCAGAGACAATCCTGG TAATCTTCCTGATGATGCCATTAAGTCTGATGACAAAAACTCAAACAATGAGCAACATAAACAGCAGAGTGCCATTAGTG ATGCTCAGATATCAGAGGAAAGCACGTTAACCCAGAAAGAACAAGCCTCCACGATACATGAAACGGTTTCAGACAAGGAT CAGACAATTTCTGAGTCAGAGAGAGTTGAGCAAAGTGGCAATGAAGATGGAAATAAAAAGGAGGAAGAAGAGAATGCCAA CACTCAAGATTCTACAGAATCTGTTAATGCAGCTGAAAATCAAGAACAAGGCACTGAACAGCAACAAGATGCTGTTCAGA GTTTTGACACTAACAACAATGAAGATGAATCAAATAAAGAGCAGTTAAGAGAGGACAAAGGGGAGAATGAGACCGCAGAG AAAGATGGGCAGATGAAATCCAATGAAGATGGAAATTCTGATTCCAAAGCAGGTGAAAGCTCTCAGGTTGAGCCAGAGAA AAATGAGAATCAGAAAGTCCAAGATGAAAGTGAAGAAACGCAGAAGCCAAAAGCAGAGAAGAAAGGAAGCAAGTCGAACA AGAAGTCATGGAAAACGCAAGCAGATCAGTCACATAGCGAAAAGAAGAGACAGAAGGATGAATCAGAAACTCCAGAGAAA TTGCAAGAGCACGAGTGGTATCTCTGCAATGTCACGGCAGGGGCGGATTACATACCGTGTTTGGACAATGAAATGGCTAT CAAAAAGTTACGTAGCACAAAACATTTTGAGCACAGAGAAAGGCATTGTCCGGAAGAGGCACCCACTTGCCTCGTGCCAA CTCCCAAAGGTTACAAAAGATCCATTGAATGGCCAAGTAGCAGAGATAAGATATGGTATCACAATGTACCTCACTCCATG CTAGCAGAGGTGAAGGGACACCAGAATTGGGTGAAGGTGACAGGTGAATTCTTAACATTCCCTGGTGGTGGCACCCAGTT CATTCATGGAGCTCTACACTACATTGATTTTCTTCAAAAGGCTGAGGCTGGAATTGCATGGGGAAAGCACACCAGGGTGA TCTTGGATGTTGGGTGTGGGGTTGGTAGTTTTGGAGGATACCTATTTGAAAGAGATGTTGTTGCAATGTCTTTTGCACCC AAAGATGAACATGAAGCACAAGTACAGTTTGCCCTTGAGAGAGGCATTCCTGCCATATCTGCTGTCATGGGTTCTACAAG ATTGCCATTCCCTAGCCGTGTGTTTGATCTTATACATTGTGCACGTTGCAGAGTACCTTGGCATGTAGATGGTGGCATGT TGCTTTTGGAATTGAATCGGCTTCTGAGACCGGGTGGTTATTTTGTTTGGTGTGCTACTCCCGTGTACCAAAAGCTCGAA GAAGATGTCGAGATATGGAAAGAAATGTCCTCACTAACAAAGAAAATGTGTTGGGAGCTTGTCACTATCAACAAGGATGA ACTGAATCATGTTGGCGCTGCCATTTACCGCAAACCCACTTCCAATGAATGCTACGACAACCGGGAGAAAAACCAACCTC CAATGTGCAAGGATGATGACGATTCAAATGCTGCCTGGTATGTACCTCTGCAAGCGTGCATGCATAGAGTGCCTGAAAAC CAGGCTGAGAGAGGGGCCAAGTGGCCTGAAGTTTGGCCTCGTCGAGTGAAGAAAGCCCCGTATTGGTTAAACAGCTCAGA GGTTGGGATCTATGGAAAACCAGCTCCTCAAGATTTTACAGCAGACACTGAACGTTGGAGAAACATTGTGGATGAGTTGA GTAACATTGGAATAACTTGGTCTAATGTGAGAAATATCATGGACATGCGAGCTGTCTATGGGGGATTTGCAGCAGCTCTG AGGGAACTTCCTGTTTGGGTATTCAATGTTGTGAACATAGATGCTCCGGATACACTTCCCATCATCTATGAGAGGGGTCT TTTTGGGATATACCATGATTGGTGTGAATCCTTCAGCACATATCCAAGAACTTATGATCTACTGCATGCAGATAATCTTT TTTCAAAGCTAAAAGAGAGGTGTAAACTTATTCCTGTTATGGCAGAGGTGGATAGAATAATCAGACCTGGAGGTACGTTG ATTGTGCGTGATGAACCGAACACCATCAAAGAAGTGGAAGCTCTGTTAAAATCTCTACACTGGGAAATAACTTACACAAA AGAACAAGAAGGCATGCTCTGTGCCAAGAGAGGCACTTGGCGACCTGACTCTGCAGCTTTGTCCTGA
Protein sequence (LotjaGi2g1v0386500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALFKARNNRRSSSPSYVSTLTILLFIALCVFGVWMLSSSSLVSPQTQSDESTTTRTAIDTSSTTDTDFSSSQDNPETTT IKTDDSAETTTKSEEQKNDEVFRDNPGNLPDDAIKSDDKNSNNEQHKQQSAISDAQISEESTLTQKEQASTIHETVSDKD QTISESERVEQSGNEDGNKKEEEENANTQDSTESVNAAENQEQGTEQQQDAVQSFDTNNNEDESNKEQLREDKGENETAE KDGQMKSNEDGNSDSKAGESSQVEPEKNENQKVQDESEETQKPKAEKKGSKSNKKSWKTQADQSHSEKKRQKDESETPEK LQEHEWYLCNVTAGADYIPCLDNEMAIKKLRSTKHFEHRERHCPEEAPTCLVPTPKGYKRSIEWPSSRDKIWYHNVPHSM LAEVKGHQNWVKVTGEFLTFPGGGTQFIHGALHYIDFLQKAEAGIAWGKHTRVILDVGCGVGSFGGYLFERDVVAMSFAP KDEHEAQVQFALERGIPAISAVMGSTRLPFPSRVFDLIHCARCRVPWHVDGGMLLLELNRLLRPGGYFVWCATPVYQKLE EDVEIWKEMSSLTKKMCWELVTINKDELNHVGAAIYRKPTSNECYDNREKNQPPMCKDDDDSNAAWYVPLQACMHRVPEN QAERGAKWPEVWPRRVKKAPYWLNSSEVGIYGKPAPQDFTADTERWRNIVDELSNIGITWSNVRNIMDMRAVYGGFAAAL RELPVWVFNVVNIDAPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADNLFSKLKERCKLIPVMAEVDRIIRPGGTL IVRDEPNTIKEVEALLKSLHWEITYTKEQEGMLCAKRGTWRPDSAALS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 49 | 49 | - | – | |
| PANTHER | 8 | 845 | 838 | 0.0 | – | |
| PANTHER | 8 | 845 | 838 | 0.0 | ||
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 20 | 31 | 12 | - | – | |
| Phobius | 32 | 49 | 18 | - | – | |
| MobiDBLite | 43 | 321 | 279 | - | – | |
| MobiDBLite | 43 | 86 | 44 | - | – | |
| Phobius | 50 | 848 | 799 | - | – | |
| MobiDBLite | 87 | 124 | 38 | - | – | |
| MobiDBLite | 125 | 151 | 27 | - | – | |
| MobiDBLite | 152 | 187 | 36 | - | – | |
| MobiDBLite | 189 | 219 | 31 | - | – | |
| Coils | 212 | 232 | 21 | - | – | |
| MobiDBLite | 220 | 253 | 34 | - | – | |
| MobiDBLite | 260 | 321 | 62 | - | – | |
| Pfam | 336 | 832 | 497 | 1.2E-226 | ||
| SUPERFAMILY | 359 | 613 | 255 | 2.81E-28 | ||
| Gene3D | 439 | 593 | 155 | 1.5E-13 | – | |
| SUPERFAMILY | 683 | 828 | 146 | 3.19E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0386500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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