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LotjaGi2g1v0393400.1

Overview

Field Value
Gene ID LotjaGi2g1v0393400
Transcript ID LotjaGi2g1v0393400.1
Lotus japonicus genome version Gifu v1.2
Description NAD(P)H dehydrogenase (Quinone); TAIR: AT4G36750.1 Quinone reductase family protein; Swiss-Prot: sp|O23207|FQRL2_ARATH Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2; TrEMBL-Plants: tr|A0A151TI59|A0A151TI59_CAJCA Minor allergen Alt a 7; Found in the gene: LotjaGi2g1v0393400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:89063765..89066696) extracted from Lotus japonicus Gifu genome v1.2.

GTAGCACTCACCTTTAATTATTTACACTTTAAATAATAAACTGAATTGTTTCAAACTCTCACGGTTTAAAAGGGTATCAG AGCAACATAAAATAAAAAATAAAAAAAAAATCAATCAAGTGAGGTTGTAGTCCTTCTCCATGTCGTATGACAGCAGGGGC GGAAGAAACGCACGCGTTAACCTACTCATAGTCGTCGTTTCGATTGGGTCTATCCTTCATTCGAATGCCACAGCGCAGCG AGGCGACGATGGTGACGTCACCAATCATTCGAATGTCTCCATATGAAACAAGTCTTTTTTTGAAGTCTCAGCTCTGAAAA TTCAGTTGCTAAAATTCTGATTTCGTTTCCCAATTCACTCACTTTCCCAATTGCTTTCGCCTTTATCGTTCTTGATGGGT AAAGGAGGAGGTTGTGTTCCCAGCAAGAAAAAGGGACCGCTAGTCGCTCAAGATTCACCGCCTGAGGCCACTCAAGGACT CAGGGAGGCTGTGATTGAAACTGAGCAGCAAAACACCCACCCCGATGAGCCAACTAGAGTCGCATCATCGTTATCCGCTG CTGTGGGCAGCACGAAGCTGAAGATCTTCATCGTGTTCTACTCGATGTACGGGCACGTTGAAGGACTGGCGAAAAGTTTG AAGAAGGGTGTGGATATTGTGGACGGTGTCGAAGGGGTTTTGTATAGGGTTCCGGAAATATTGTCGGATGAAGTGCTGAG CCAGATGAAGGCGCCGCCCAAGGATGAGACCGTGCCGGAGATTACGGCTGCAGAACTTACTGCGGCTGACGGGGTGTTGT TTGGCTTTCCCACAAGGTATGGTGCCATGGCGGCGCAAATGAAAGCTTTCTTCGATTCCACTGGGCAGTTGTGGAAGGAG CAAAAGCTCGCAGGAAAGCCCGCTGGTTTCTTTGTCAGCACGGGCACCCAAGGCGGCGGTCAAGAAACCACAGCGTAAGG ATTTGCATTTTAAAGAATCTTTTTTCTTTCTACAATGTGGAGTTTGTTTTGTTGTCATTTGTCGTCAATGTCTCTGCCTT TGATTAAATGTTGCATTTGTTTTAATTTTGCACATCATAGATATGAAGGCATAAATTGGAATCTTCTATGACGCATCTGA AGATTATAAGATTAAACAACACAGCGAAGTATAACATTCATTGGACAAAATCTAAGAACACAATAAATAGATAGAAGAAC TTTGAATTACTGAGTTGCAACTCGCAAGCTTTGTATCCTAGGTATTTTTGAAGTCTCAATAGTCAGTGTTGAACTAGTTC TTCTGATCATTTAGTATAACATCACCTTTTCAAGTGTTATATATGTTTCTAATGGTGTCCTTCCACGAATGAATGAGATA AAAGAAAGTTCCAATGTATTGAAGACTAAAGTTTATGTGAGCTACATGTTATTTATGATTCATATTAGCATGAGATTACC ACCATATTGGATTATAATGTGTGGGTGATATGAAGAATTGGTTACACAGTTCAGGGTAATAGACAAGCTTAGTATGGGAT AACCACAGTGGGGCATCTTTTTTTTTTTCTTTTACTTAAGTTTTCAACATTTGTTCATAGGGTGGTCTTTTATGCTGATA AGATAGTGGAAACACTTCTGGTCGGTGAAATAAGCTTCAATTGAATATGTAATTTATGGAAGTGTATGTCTGCAAACTGA GCAAACTGAAATTCAGATTTGGCTACTCTTTGCTTCTCTGAAGTGAGGGGTCTAACTTTAATTGAAGACTAAATAACAAA CTGTCACCATTAGTTAGAAAATCAATGAAGTGAATTTAGACAACTTCATAGCTACATGCGTTTCAACAGTTCAACCAAAG GCTGGGTCCATTTTTCTCTAAAGTCCTCACTCTAAAGGGTCAAATAAATATGATGACCATCACATATTCTTCTCTGATAT TATTCGGTAGAAATATTTATGTCTTTTCTTGGTGGAAATTAGAGCGGTCTCTTAAATAATAGTGTTGTAATAGTATTATG TAATACTTAGGTTTGAGTTTTTTTAATGCAGTTGGACAGCAATCACTCAGCTGGCACACCATGGGATGTTGTTTGTTCCT ATTGGATATACATTTGGACCTGGAATGTTCAAGATGGACTCCATTAGAGGGGGTTCTCCATATGGTGCAGGAGTGTATGC TGGTGATGGCACAAGAGAGCCAACTGAAACAGAGCTGACACTTGCAGAGCATCAGGGAAAGTATATGGCTACTATAGTCA AGCGGCTCGCAGCCAAGTCATGATAATGTTTTCTTGATTTCATTCAATTCTTTGTGGATCATTGTATTCTTTTTTCCGTT CTTTTGTGTTCTTGACAAATTGGTTTTGGCATTTTTTCATTGCATTGTGACGAGGAAAGTAAGCTTTGTTCCCCTATCAA TTATGTTGGGATGAGATTCCCTTGTTGTAGATTCTGCATTGTCCTGGAAGGTGTGTGGCTGTTCATAAATTTATGTCAAA TAATTGTGTGAAGTTTGCATATCTTCATGTCTATTTCTTTTTTGGGGGGGTGTTTTATAGGCTACGATAATAGAATTGAT TTAAACTTTTGTGACGACTTAAGGTAACTCGTGATTAGAACATCAACTTGTACAAAGGAAAGCAACATCCCCCACTAACC TACCCCTAAAAAAGCAAGAAAAGGTAGGAACTAAAATTGAAGACAGTAAAGTAGGAAGAGAAAATTGCACCTGCTTTGAG CTATTGTTAAAGAATAAACAGTTTTCACCAAGGGAGAAACACTTATAACAACCTTGCCTTTATGTTTTATCTACTTCCGA AATGTTTAACCCTTGATCTTATAACAACACACCTTGCCTGCCATCAAATAAGTTTTAATAAACTCTTGCAATTTGAATTT TATAGTTATAATATTTATTTTACTATGACTAAAATGATAGTCAGTACTTAAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0393400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTAAAGGAGGAGGTTGTGTTCCCAGCAAGAAAAAGGGACCGCTAGTCGCTCAAGATTCACCGCCTGAGGCCACTCA AGGACTCAGGGAGGCTGTGATTGAAACTGAGCAGCAAAACACCCACCCCGATGAGCCAACTAGAGTCGCATCATCGTTAT CCGCTGCTGTGGGCAGCACGAAGCTGAAGATCTTCATCGTGTTCTACTCGATGTACGGGCACGTTGAAGGACTGGCGAAA AGTTTGAAGAAGGGTGTGGATATTGTGGACGGTGTCGAAGGGGTTTTGTATAGGGTTCCGGAAATATTGTCGGATGAAGT GCTGAGCCAGATGAAGGCGCCGCCCAAGGATGAGACCGTGCCGGAGATTACGGCTGCAGAACTTACTGCGGCTGACGGGG TGTTGTTTGGCTTTCCCACAAGGTATGGTGCCATGGCGGCGCAAATGAAAGCTTTCTTCGATTCCACTGGGCAGTTGTGG AAGGAGCAAAAGCTCGCAGGAAAGCCCGCTGGTTTCTTTGTCAGCACGGGCACCCAAGGCGGCGGTCAAGAAACCACAGC TTGGACAGCAATCACTCAGCTGGCACACCATGGGATGTTGTTTGTTCCTATTGGATATACATTTGGACCTGGAATGTTCA AGATGGACTCCATTAGAGGGGGTTCTCCATATGGTGCAGGAGTGTATGCTGGTGATGGCACAAGAGAGCCAACTGAAACA GAGCTGACACTTGCAGAGCATCAGGGAAAGTATATGGCTACTATAGTCAAGCGGCTCGCAGCCAAGTCATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0393400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGKGGGCVPSKKKGPLVAQDSPPEATQGLREAVIETEQQNTHPDEPTRVASSLSAAVGSTKLKIFIVFYSMYGHVEGLAK SLKKGVDIVDGVEGVLYRVPEILSDEVLSQMKAPPKDETVPEITAAELTAADGVLFGFPTRYGAMAAQMKAFFDSTGQLW KEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTET ELTLAEHQGKYMATIVKRLAAKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 28 28 - –
PANTHER
PTHR30546
35 260 226 7.8E-130 –
PANTHER
PTHR30546:SF3
35 260 226 7.8E-130 –
Gene3D
G3DSA:3.40.50.360
58 263 206 1.0E-71
IPR029039
TIGRFAM
TIGR01755
63 259 197 7.4E-63
IPR010089
SUPERFAMILY
SSF52218
63 259 197 1.7E-52
IPR029039
ProSiteProfiles
PS50902
64 252 189 20.278
IPR008254
Pfam
PF03358
114 204 91 2.4E-11
IPR005025

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003955
Molecular function NAD(P)H dehydrogenase (quinone) activity Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone.
Subterm of
GO:0010181
Molecular function FMN binding Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0393400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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