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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0394900 |
| Transcript ID | LotjaGi2g1v0394900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|I3S5G9|I3S5G9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0394900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89250721..89254110) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTTCACAAGGTTCCTTATAGTTTATAGTAGTTGATCCTCCTCTGCACATGGGAGGAGAGTCAGTCATGTTCTGTTAT TGCAATTACATGTTTCTTTTCTATTGCTTTATGCAACATAAAGATTAAGAGGTATCAAAGGAGATACGAGTGGCATCAAC CTAATGGTATATGATATGTGCTTTTTGTCCCTATTTCAGATTGCTTCAGAAAGGAAATTGGTTCATACAGGAGAAAAGTT GTAAGATCCTTGGCTTAATAGCTAGGTAATACAAACATGACAAATTCCTACATCTTAATTCAAAAGGTTTAGACTAAAGT AAATCAAATAGATGGTTGTGTTTTATGAGTTGCTTTTTCAATTTTGAACTTGCCCTTGTTTGTTATTATAGTGCCAGGCC AAAAAATCAGAATGGCATTATTGCAAACGGAGAAGCATCAAAGTCAAAGAAAACCACTATCGATGATGTTTTGATAGGAT TGGTAAAATGGCTTTGTGAACAGGTATGTAATGGGTATTATAATTCATTTTAGATATCTATAAGTCTTCCCAATATAAGC TTGTTTGCTTTTAGATAAAACTAGAATTTGGCGGTTGGTTATTAAATCTTGTGCAAGTGACTGGAATCATTGTTATGAAC ATTCATATTGATTATTGATTATACATTAATGAGACTCTACACTCTACAGACCTTTATTCATATTGAAGCTGCTAGAATTG ATCGACATATATAAATATGAGAAATTTTTATGATCATTCAAGTATCACATATGGCACAATGTATGTTGAACTTCAATTGG TTATAATTTGGACCCCATAATACATGACAAGGTGGTAAAAAATAGAGACTCAGACCATTTTGGCATTTGTAAGATCTTGT ATGACCTAACTGAGAGGAATTATGAGCATTTACATTAAATTCTGAAAGTAGTGATGAATGCATTCTCATCTTCATATTAT TATTATCTGCAGCTGAAGAAACCTTCTCATCCTACTCGGGGTGTCCCTACTGCTATCAACTGCCTAGCAACTCTACTTAA GGAACCTGTGGTTAGGTCTACCTTTGTTCAGCTGGATGGGATCAAGTTGCTTGTACCTTTGATTTCTCCTGCATCCACCC AACAGTCTATTCAGGTAAGTTTGCGGGGCTCTATCTTTGAGAAGCTAAATAATTGTATTTATCCTCAGTTGGCCCATCTA ATTTCTGCCAATAGGTGGCTGGGGAAGTGTGATTCATCTGGTTATAACTGTAATGCATACTGGTCCAATAGCTTGTATTA GAACGGCTAATCATCTGAAAATACTAAATGTACTTTCTTTCCTTCAAGAGTAATGGCGGATAGGGTGATCTGGTGATTCC GAGATTTTTCTGGGTTTGGGATTTTATTAATTGATAAGATAGTGCTGATAAAATTTGGCAAGTGAGTTGGAATATATTGC ACTTGTGTAGGGAATAAAGGGAAATTAATTGAAAATTCTTTCTGTAACAGCTTCTTTATGAAACATGTCTCTGCATATGG CTCTTATCCTATTATGAGCCAGCGATTGAATACCTGGCTACTACAAGAACCCTTCCGCGACTTATTGATGTTGTTAAGAG CTCTACAAAAGAGAAGGTAATGCTGACTTATTTATGTTTACAGTTCATTTAATCTTTTATTATAAAAAATGATGTTCACA TTTCTCTTGGGAATCGTTATTTGTAAGAAATGCATAATGACTATTAGCTAAATTCTATAAGCTTTCTGGTATTTTTCCTT TATATGTTTTCTTCAATATCATATTAGGAATAGGTACTTTGTTACTTTTTATAGAATCAAAGCATGATTTTATCCAGTTT GTTTGCCTAATGTTATTAGGTTGTTAGAGTTGTTGTCTCAACCCTCAAGAACTTGCTCCCAAAAGGGACCTTTGGTGCTC AGATGGTTGAACTTCAGCTGCCACAAGTTGTTCAAAGCTTGAAAGCACAAGCATGGAGTGATGAGGTGAGACGGAGAGAA TTTCAATGACCTGCATTTACTTTTCCTGTTGAATTTTATTCTGTGCAAATGGACTTAAAAAATATGAGGTGTCATGTAGA GATCAGACAAGTCATTCTGGGTTTACATCTTTCCATTAAGAGCTTGTATGGATGATTCTATAATTATTTTTTGTAGAAAT TGTTTGGGATTTGGAAACGTTACTTTTAGAAGAATGATTTTTATGCTTGGGAATAAGTTCTTGAGATGATATCGGTTAAA AGTACTTCTTAGGTGTGGAGTTACTAAGTAAATATGTATAGGTAAGAACCTTTGGGAGAACCACACCTCAAAAGTTAGCC ATTCTAGTTGGAAAGCTCGAGGCCTTACACACCCCACACTAGATACTAACAATGTTGGGACTCAAGTTCCATACCTTGCA ATCATATCCTAACATGTCACATGTATATTCAATTTTGTGTAAATATATCTTAAATTAATGAAGGATAAATTTGGTACCTT AAGAGACTTGGCCATAATGCTTTTCAGGACTAGAATGCATTTAAGATTTTTTTTTTTACAAAGTCTGCCCCCAAAATATA TATTGAGAGCTAGAATGCTTTTGGGGGTGCAACCGGATTGGTGCAGTCATAACTTACATTTTGTTTTTTTGTTTTTCTGT CCTGATTTTAGATATAGTTGGGAGTTTAGGTCATTGCAATAATATTTATTAATTTTCAGGTTGTAGTTATATATTTGCTA GATACACTTGCCTTCTGCATAAAGTTTTATATATTTCTTGTGCTTCGTAGGACTTGTTGGAGGCATTGAATTACCTGGAA GATGGGCTTAAGGATAACATTAAGAAACTAAGTTCCTATGATAAGTATAAGCAAGGAGTTCTGCTTGGCCATCTCGATTG GTCTCCTATGCACAAAGATTCGATATTTTGGCGAGAAAATATCACTAACTTTGAAGAGAATGACTTCCAGGTAATCTATG CACAAAGTTATCTCTTCATTTTGTGCTTCAATTCTCATTGGAGTACACATGTAACATTTTCCCTCAACCGTGATATTGAG AAAGAATTTATGGTAGTTGGCAATCATAATGATGCTATATTTTCATGTACTATATTCTGAAAATCTTTAATCTACTAACT AGATATCTTTATCTTTTGCAGATTTTAAGGGTCCTAATAACAATTTTGGACACTTCCAGTGATCCAAGGACTCTGGCTGT TGCTTGCTTTGATCTTTCTCAGTTCGTCCAGCACCATCCTGCTGGGCGTTTCATTGTGACTGACCTTAAAGCCAAGGAAC GGGTAATGAAATTAATGAATCATGAGAATGCTGAAGTAACTAAAAATGCGCTTCTCTGCATCCAACGGCTTTTCTTAGGT TCAAAGTATGCCAGCTTCCTACAGGCCTAG
CDS sequence (LotjaGi2g1v0394900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGAACTTCAGCTGCCACAAGTTGTTCAAAGCTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCATT GAATTACCTGGAAGATGGGCTTAAGGATAACATTAAGAAACTAAGTTCCTATGATAAGTATAAGCAAGGAGTTCTGCTTG GCCATCTCGATTGGTCTCCTATGCACAAAGATTCGATATTTTGGCGAGAAAATATCACTAACTTTGAAGAGAATGACTTC CAGATTTTAAGGGTCCTAATAACAATTTTGGACACTTCCAGTGATCCAAGGACTCTGGCTGTTGCTTGCTTTGATCTTTC TCAGTTCGTCCAGCACCATCCTGCTGGGCGTTTCATTGTGACTGACCTTAAAGCCAAGGAACGGGTAATGAAATTAATGA ATCATGAGAATGCTGAAGTAACTAAAAATGCGCTTCTCTGCATCCAACGGCTTTTCTTAGGTTCAAAGTATGCCAGCTTC CTACAGGCCTAG
Protein sequence (LotjaGi2g1v0394900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVELQLPQVVQSLKAQAWSDEDLLEALNYLEDGLKDNIKKLSSYDKYKQGVLLGHLDWSPMHKDSIFWRENITNFEENDF QILRVLITILDTSSDPRTLAVACFDLSQFVQHHPAGRFIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGSKYASF LQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 163 | 163 | 3.5E-94 | – | |
| PANTHER | 1 | 163 | 163 | 3.5E-94 | ||
| Pfam | 1 | 34 | 34 | 2.3E-5 | ||
| SUPERFAMILY | 1 | 154 | 154 | 3.94E-65 | ||
| Pfam | 40 | 152 | 113 | 6.3E-40 | ||
| Gene3D | 54 | 155 | 102 | 1.2E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase, V1 domain | The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane. | ||
| Molecular function | Proton-transporting ATPase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi2g1v0394900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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