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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011987
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.417s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1828360.2
n.a. PREDICTED: V-type proton ATPase subunit H-like isoform X1 [Cicer arietinum] gi|502153136|ref|XP_004509230.1| chr2 27406267 27409734 -
3 domain predictions
2 GO terms
Lj4g3v0911410.1
n.a. V-type proton ATPase subunit H [Medicago truncatula] gi|357518453|ref|XP_003629515.1| chr4 13584671 13591032 +
3 domain predictions
2 GO terms
Lj4g3v0913480.1
n.a. V-type proton ATPase subunit H [Medicago truncatula] gi|357518453|ref|XP_003629515.1| chr4 13612664 13617160 -
3 domain predictions
2 GO terms
LotjaGi2g1v0394900.2
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|I3S5G9|I3S5G9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0394900 LjG1.1_chr2 89250721 89254110 -
2 domain predictions
2 GO terms
LotjaGi2g1v0394900.3
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|I3S5G9|I3S5G9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0394900 LjG1.1_chr2 89250721 89255236 -
2 domain predictions
2 GO terms
LotjaGi2g1v0394900.4
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|I3S5G9|I3S5G9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0394900 LjG1.1_chr2 89250721 89255236 -
2 domain predictions
2 GO terms
LotjaGi4g1v0114200.1
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|B7FJS8|B7FJS8_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0114200 LjG1.1_chr4 16513403 16520117 +
2 domain predictions
2 GO terms
LotjaGi4g1v0114200.3
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|B7FJS8|B7FJS8_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0114200 LjG1.1_chr4 16513896 16519747 +
2 domain predictions
2 GO terms
LotjaGi4g1v0114200.4
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|B7FJS8|B7FJS8_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0114200 LjG1.1_chr4 16513896 16519747 +
2 domain predictions
2 GO terms
LotjaGi4g1v0114200.6
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|G7LFK4|G7LFK4_MEDTR Vacuolar H+-ATPase subunit H, putative; Found in the gene: LotjaGi4g1v0114200 LjG1.1_chr4 16515118 16519747 +
2 domain predictions
2 GO terms
LotjaGi4g1v0114200.7
n.a. V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|G7LFK4|G7LFK4_MEDTR Vacuolar H+-ATPase subunit H, putative; Found in the gene: LotjaGi4g1v0114200 LjG1.1_chr4 16516258 16519747 +
2 domain predictions
2 GO terms