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LotjaGi2g1v0398200.3

Overview

Field Value
Gene ID LotjaGi2g1v0398200
Transcript ID LotjaGi2g1v0398200.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G66880.1 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3; Swiss-Prot: sp|Q39193|SRK2I_ARATH Serine/threonine-protein kinase SRK2I; TrEMBL-Plants: tr|A0A1D6Y9D0|A0A1D6Y9D0_9FABA Open stomata 1; Found in the gene: LotjaGi2g1v0398200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:89522356..89527112) extracted from Lotus japonicus Gifu genome v1.2.

TCCGCATCCACCACCACCGATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCACGACAGCGACCGGT ACGATTTCGTCCGCGATATCGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACACCAAAGAGCTCGTT GCTGTCAAGTACATCGAACGCGGAGATAAGGTTAGTACAGTATAGTCAATCAATCACCATATTCATATTGTCCCAAAAAA ACGAGGTTTGCAGATTTTTTGGGATAAAGGAACTGGAAAAGTGGAAATGAATCACATGTTCATTTTTGTTGTCTGATATT TATTGACGCTGACGTGTGATGCTTCTTTGGAGGACCATGTTTTGGGTTTCCATTTTTGTTTTGGTGCTAATGGAAGTTTT ATTTTTGTTTCTTTCAATAATAGCTTTTTTTTTCTCTCTTGCTGTTTTGTTAGTTAGTTTCGGTGATGTCAGATTGTTGA ATATGGAAAATTTTCCAAGCTCAACTCGCATCTGAAGTCAATAATCAGTTAATAATGCATTTTGTAGCATGAATGAGCTG TTTCCTGTTATGGAAATGAGAGAAAACAGTGACGAATTCAAAGCTTGCACTCTTTTGGTTTTCTTGTTGGAGCACTAGAT TAAGAATTTTGGGCGTCATATAGAAAACCATTGGTATGCTTTTACCAAATAGTTTAAGTTCATGTTATTGTGTATGGCAG ATTTATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGGTTTAAGGAGGTTGG TATATTTTTATATATCTTTTTTTTTCAGACGAAGGAATGAAGGATATTATATTTACGGAGAATGTTCTATGAAATTTTGC TCAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAAAATCCACA GTGCAGGGCGTTTTACTGAGGATGAGGTTTTTATACAATTTATTTACTTTTCTGACACCATTCATAGAGAAAAAAAGTTA CTTGTATTCTGTTTCCTGTTTTACTAGTTAACCCGTTGTTAATTTGCAGGCTCGTTTCTTCTTTCAACAACTCATATCTG GGGTCAGCTATTGTCATTCAATGGTAATTGAACTTCTCTCCCTCCCCCAACATCTGATCTTATAGGTCTAAGTATGTATA AGTAATGTATCGATCTTCTGAGTATTGTCTAATGTATATTATATCTCCTCATGAAGCAAATTTGTCACCGGGATCTGAAG TTGGAAAACACTTTGTTGGATGGAAGTCCAGCACTTCATTTGAAGATATGCGATTTTGGATACTCCAAGGTAAGGATTTC TTTGTCTCACTAGCCTTTTGCATTCATGGTGTGAGTTCTGTATATATTTTACTAGGATGTGTGCGCTGTAGTTGACTAAC TTTTCCTTTAATTGGTGATTTTGTCAAAAAAAATACTTATTGCACATTTGTGGCTGCTATTTAGGCTCCTTCGAAAACTA GCATGCCTCCAAGTTACTTCCTGTATCTGGTTGCTCTTTAACTTTTCTTGTGAATCTCTTTTCAAAAGATTTTTTCAGTA ATTTCTGTAATTGGTAAGGGACAATTGTTAATGACTATTTATTATGACAGGAAACTAGCGGCATCTCATGATTTCTCTGT TTCACTTGCACATCTTTGTGGTGTTGTTAAGACAATTGAACCTGTATTTGTGTCATATTTTATGGTGCATAGTAAATGTG CAGTTAAAATGGAACTTCCCATGTCCATGCAATGATGCCTAAAGTCCTTAATTTTTCTTTTACCAATTCAATTTTCATCT GGCTTGTAAGCAGTGACGGATCCAGAAATTTATTGTTGTGAGGGCAATATATACATATAAATTCGTATAAAAAAATTTAA TTTAATTATATTACTAGAAGTGAGTGCATTTTTTACCAAATAAGGGACACAAGTAAATACATTTTTTACCAAAGAAGTCT TAAAAAACCACATACTTTTACCACTCAAGTGAGGACATTTACCAATGTGGAATACAAGTGAGGGCATTTAGCAATGTAGA ACACAAGTGAGAGCATTTTTTATCAAAAGAGTCACAAAAAACCACATACTTTTACTGTACAATTTTTTTCTAATGATTTT TTTAAAAATTTAAGTGAGGGCACATGCCCTCATGCTGTTCTACCTAAATCCGTCACTGCTTGTAAGCACCTAAATATTCA TTTTACAAGCTAATTTGGAACTTCTCAAGTATAAATCACCATTGGAAATCTAATAGATTTTTATCTGGCTTGTAAGCAGT CTTCTGTGCTTCATTCTCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTACTGCTGAAGCAAGAG TATGATGGCAAGGTAGAGTACTTGGTTTCTTGGTCTTGTTCTTTTACTGTATTATTACAGTCATAATTTGATAGTAATTA TTTACGGGTTAGTGAGTCCTGGTATAAGAAGCTAAAGCAGTGATATTCTGGTAGTCTGTCTGTTCTGACCTACTCCAGTG GTAATATTTTTCTGGACTATGAACTAGGAATGGTTTTCTCTTCTGGTTGTCATGCTGATGCAATTCATGTTTTCTTGGCA CTAGTTAATCTTCTCTCCTTTCATGAACTTAAATCTCTACTTTTATTAACGAAAAGAGGGTGAGAGTTAATTTGTATCTT GCACCTTTTTATTCCTTAAGTTCATAAGGTCCATATTTTGTTGCAATTAGATAATGATTGACCATTCCCCTCCACTCTTC CTTTTTTGCATGCCCACTCTTCCTCCCTTAGTCCTTTTTTTTTCATACTTAGATTTTAGAACGTATTCACATGTGACAGC GTACACACTTGTAGTTGTAAGAATGCTTTGTAATTTTTTAATCTGCAATATCACTAGTTAAGCACCTACAAATAAGCTTG TATTCTTGAGCCCTGCCCATTTGGGTTGGTGGTGTGATGAGTTCGGATTGTGCTCTGGGCAAATATTTCTGTTTTTAATG TTGCCAATATGTATATCGAGTATCTTATTGTGTTTCCACTATGCTACCATGCATTTAATCAGATTGCAGATGTCTGGTCA TGTGGTGTAACCTTATATGTAATGCTAGTGGGAACATATCCTTTTGAAGATCCAGATGATCCAAAGGATTTCCGGAAGAC AATTCAGGTTGTTCACCTATATTAAGCTTTTTGCATCTTTTTCTTCATGATGAGCATCTGATTGCATTACCTTAAGTGTT TTGCTTGGTTCCTTGCAGAGGGTTCTCACTGTCCAGTATTCCATTCCAGACTTTGTTCAAGTGTCTCCTGAGTGCCGCCA CCTTATCTCTAGGATCTTTGTTTTTGATCCTGCAGAGGTATTTCTGTTTTCCAATAGCTCCCCTACTGAACCTAATTTCT ATTATTTGACACATGCTATACAATTCTTGAGGAGTTTTGTCAATAGATGCATTTTATATAGTATATACTACTACTCTACC TTGGCTTAGAATCCACTAATAAATAAACTGAGTACTTTTTGATACTGTCTTGATAAACCTAGAGTTTTACTCTAAGACGA AGTTCTCCTTTGACACGAGTTTCAAATACTCTCTGAATTTGTAAAAATCGCAATATTACTATTAACTATTCAAAAACCTA ATTTACATAAGACATCTAAAGGGTAGTAGCCTGAACTTGGGAATTTGCCTTCTCAGTGGAAGTGATATTTTAATATTTTC CTTTTACATTGTCCGGGTCCAGAGCTGCTTTGATTGTGTATTAGCATTGTTAATAATATTTTGTAGGCACAGCTGCATCA GTCACTATAAATTAAGAAATTGTAATATTAGACAACAGCAAAAAATGTTCATTGCATATTATGAACTATGAAGATTGAGC TCTTCTTAGCCGTTTTCGTTGCCAAAACCTGCACGTCAGACACTTCTTAGACGTTTGCTTAAACACTCAAATATGATTTT GGGAGACATGACACTTATAAAATTATTTTATTTTAGTGTATTTTAAATTATTCAAAAGTAATTTAAAATATGTCTAAAAA GTTAAAAGTAAAACCTGAAAACATTTGAGGAACTTCATTTGGTCCACACAACGATGATCATTTTGTTGTCCACGGCTCCA CGCATGTATACATACATAATAAGGGGCATATCATGATATCAAGTGAACATAATAAGTGACCAGCTAATTTTGACCACATA ACCATACATGAATGATCTATATTAGCTCCTCTCAAACTAATTTGTCCATTCACATGTTGCATGTGATGTGCACACACACT GTATCTCACAATCACACGCACTCCACACATGTTTTTGTTTGTGCTTCATATATTATGAGTCCAACCTTTTGCTTATACAA GGTTTAAACTTTACTCACTATGCCTAATTAATTCGTTCATTTTGAACCTTATGCCTTTGGACGTCAATGTGGCAGAGAAT CACCATTCCTGAAATACTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATCAAAAGATAATGAGTAACCAATTCG AAGAGCCAGACCAGCCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATACCAGCAGCTGGGTCT TATTCTTTAGATCAGTTTATGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCCGACTTTGAACTTGA TTGTGATAGTAGTGGGGAGATAGTGTATGCCATATAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0398200.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCACGACAGCGACCGGTACGATTTCGTCCGCGATAT CGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACACCAAAGAGCTCGTTGCTGTCAAGTACATCGAAC GCGGAGATAAGATTTATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGGTTT AAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAAAATCCA CAGTGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTCAA TGTCTTCTGTGCTTCATTCTCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTACTGCTGAAGCAA GAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGTGTAACCTTATATGTAATGCTAGTGGGAACATATCCTTTTGA AGATCCAGATGATCCAAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCACTGTCCAGTATTCCATTCCAGACTTTGTTC AAGTGTCTCCTGAGTGCCGCCACCTTATCTCTAGGATCTTTGTTTTTGATCCTGCAGAGAGAATCACCATTCCTGAAATA CTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATCAAAAGATAATGAGTAACCAATTCGAAGAGCCAGACCAGCC CATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATACCAGCAGCTGGGTCTTATTCTTTAGATCAGT TTATGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCCGACTTTGAACTTGATTGTGATAGTAGTGGG GAGATAGTGTATGCCATATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0398200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDRASATATMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIYENVKREIINHRSLRHPNIVRF KEVILTPTHLAIVMEYASGGELFEKIHSAGRFTEDEARFFFQQLISGVSYCHSMSSVLHSQPKSTVGTPAYIAPEVLLKQ EYDGKIADVWSCGVTLYVMLVGTYPFEDPDDPKDFRKTIQRVLTVQYSIPDFVQVSPECRHLISRIFVFDPAERITIPEI LKNEWFLKNLPADQKIMSNQFEEPDQPMQSIDTIMQIISEATIPAAGSYSLDQFMADNLDMDDGMDDLDSDFELDCDSSG EIVYAI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
1 96 96 1.8E-37 –
PANTHER
PTHR24343:SF379
7 135 129 1.5E-180 –
PANTHER
PTHR24343
7 135 129 1.5E-180 –
SUPERFAMILY
SSF56112
19 281 263 5.9E-67
IPR011009
ProSiteProfiles
PS50011
21 246 226 31.976
IPR000719
Pfam
PF00069
21 139 119 9.4E-28
IPR000719
ProSitePatterns
PS00107
27 50 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
97 139 43 1.9E-7 –
PANTHER
PTHR24343:SF379
137 321 185 1.5E-180 –
PANTHER
PTHR24343
137 321 185 1.5E-180 –
Pfam
PF00069
140 246 107 3.3E-23
IPR000719
Gene3D
G3DSA:1.10.510.10
140 254 115 3.8E-33 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0398200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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