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LotjaGi2g1v0400100.2

Overview

Field Value
Gene ID LotjaGi2g1v0400100
Transcript ID LotjaGi2g1v0400100.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Methionine aminopeptidase; TAIR: AT4G37040.1 methionine aminopeptidase 1D; Swiss-Prot: sp|Q9FV50|MAP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0R0LM01|A0A0R0LM01_SOYBN Methionine aminopeptidase; Found in the gene: LotjaGi2g1v0400100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:89748729..89753598) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCGAGCGGCGCTTCACTTCAAAATTTAAGACTGAAAACTTCATTCATGGGAGATCGATTCCTACGCTGCTCAACGCT GCAACCCCTTCCTCATCTATTCCGTTACAATCCTGGTTCTTCCTTTTTCTTACAATCACTTTCACTTTTCAGCCTCTAGG TTTCTTTTACTTCTTTTTTTTTTTATATATATTTTTTTATAATTTTTGTGACAGGAAGCAAACATGTCTCGATGCAGTTA TCTCGATCACTTTCTGGTTTAACCAATCTCTTATTTAATAGAAGGTATACATAAATGATTCAATTCTTAGTACTGTGTTG ATTATTTGATTATTTCAAAATATTATTGAGTTTAATCTTAATGCTGGTCAATCAAGATTAAACTCTTGAATCTTGATTAA CTTAGTTGCCTTTGTGCATCTCACAATCAATGCCTTTTGGTTAAAATTTTATTATGCTTTGGCTGTGCAGGAATGTAGAT GAAGTGGCCAACAGCAAGCGAAAACGTCTCAGACCGGGGAAAGTTTCTCCGCAACTACAAGTGCCAAAGGACATACTACG GCCGCCATATGTAAAAACCAAGGTTCCGGCTGGACTTGTAAGTGGGCCTGAAGTGCATGATGAGAGGGGGATAGAATGCA TGAGAGCTTCTGGAAAGCTTGCAGCACAGGTTCTTCAGTATGCCGGCACCTTAGTCAAGGTGAGTTCTTTTCATATTTCG GACTGTTATTATTAGCTAGTGCAGGACATGGAAAGAACCCTAATTCTTTTAAAGAGTAGGACTTATATAATTATTACACT GATAGGTATGTTTTTATTCGAAAAGAAAAAAATAAGATGTTTTTATGTTAGTTTTAACTTCTTTTGACAGCCAGGTATAA CAACAGATGAAATTGACAAAGCAGTTCACCAAATGATAATTGATAATGGAGCATACCCATCTCCTCTCGGCTATGGTGGG TTTCCAAAGAGTGTCTGCACTTCTGTCAATGAATGCATTTGCCATGGAATACCAGATTCCCGTGTGCTTGAGGTCCTTCT ATAAAAGTTCTTATTAAATTAGGCATCTTTTATGAAAAAAATGATTACTCATTCCTTTTTTTGCAGGATGGTGATATAAT CAACATTGATGTTACTGTTTATCTAAATGTAAGTTTTTTTTCCCCTTTTCTTACTTTTTTTGGGGGAGGGGGCGGAGACA CATTTTCTTTTTGTTAGGGATGAGAGTGGAATAGCCTTGGAATTTAATTTACTATGTACTTTTTCATACTACCTTCCCCC CATCTTTTTTGCTTAAGCCATCCTGATGACATTATCAGGATTAACTTTTTGTTGGCAATGTTTATGTTCTCTGCTATGCT GTTAGAGAGGAGGCAGGCTAGGAATTATTTATTGTGTACACAAAACTTGGTCCTGTATCAATTTTCGTTTGACTTGTTAT TCATATGGTGTTTTTTTTTTCATCTTTTGTATTAGAGTGTGCTGGCTGCATAGAGAATTTAAGATTAGCTTTTCCACTTT CTTTTCAGTTTTGAAATTGTACCTTTTGAGATATCTAAAATTGTAGGGCTATCATGGTGACACATCAGCAACTTACTTTT GTGGCGACGTTGGTGATGAGGCCAGAAAACTAGTTCAGGTAACATATCCTCTTCCTGCCAGCAATGGCTGTGATTTGGTG CTTATTTTTCTTCCATACTTCCATGCACATGCACCCTTCATTAGTTCCGCTCTTTAATCTGTTTCTCGTTCTAATGTACT TTTTCAATAATTTCTCTCTATATTTTAGGGTTAGAATCTTTCTATTCTTACCTAAGAGTGAAACGGCACACAAACTGAAC TATATTTAATATCAATGGCATGTGAAAAGATGGACAAAGCTCGCTTGCTTCAACTTTAAATGTGCAGGTCGGGTAGGAAC CATAGATAAAAAACTGGAACTGATTGGCCAGATTGACCTGAAAATTGGTGTATTGATCAAATTTTTGATTTGTTCAACCC AGATAACTAATTGTGTTGTACAAACAAGTAAAAAGTTGATGATGAAGAACCAATTTGCACCGGTTCTTTCATTTGTTTTC TTTGTATTTTTGAACTTTTTTGCTTAACCAAAAACATTTTTTGGCCTAATAAATGCATATGCAAGATTCATGTATGAATT GTTATTATTTAACCTCTTATTAGTTAGACATGGCACATAATATGGTGTCTTTATCAGCTAATGTCTGGCCCAATTTTTAC AATATTGGTAGGAATTTTTAATTTCAGATTACTTTGTTGGAATCCTTGTTGTTTTCTGCATTGGAGTCCATTCTGAAAAG AAAGGGCTGGTGTTGAAACAGTCTTAATTCATTAGGCATTGATAAGTGATGATTTTTTTTATCTAAGGACTAAGTTATTG TTTTTTAATTTTAGAAGTTGTGATAAAAAGGAAATATTAGTACATTCACTTTAGGAATGAAAATCTGAAAACCCCATGCT AGATGAAGCTTTAAATATCATTCTAAGTTTTTATATTCAGAACCTTGTAATATCAGGCAGTGAAAGAAAGCTAATTCACC TGATTAGATGCATTGAAAATATTTATGTTCATAGCAGACAGTAACTTAGGTATCAACATGTGATGCTATCCAGTAGAATA TCCCTGGTGTTAAATTTTGCATGTTATTCAGGATGCATACTGAAGAATGTCAGATGATATTCATTTACGGCCTTTTATTA TCTGGTAGCCTGGAGTTGTACCCCTTGTTCCTATAAGTGGTATATCCCATACAATTCATTATCTTACCTTATGTCAACTA TAAGGAATTTTATTTATATTTTACTTATATCTCTTATTTCATTCAGTGATTTTTCGGTGATAGTCGAGGCATTGTCCTCA TTATTTTATTTGTGCTTAATTGCTCATAGGAGTGGGTTCTTCTTCCACCTTATACTGAAACAGGTAACTAAAGAATGCCT AGATAAAGCAATATCTATATGTGCGCCGGGAGTGGAATTCAAGAAAATTGGCAAAACGATTCAGTATGATGTTTCTTTCA TTTGCTCTTTTTTTCCTGCTTTCCTACATTGCAGTTGATAGTTGAATCTGATAAATTACTTCAATCTTGTATTAATGAGT TAGTAGTTGATGACAGTGATTTAAATTCATTTTGATTCTTGATTATATAGTGATTCATGGTTGATTTTTGCTTTTTTAGT GATCATGCGGATAAATATCGTTACGGTGTTGTCCGACAGTTTGTTGGGCATGGTGTTGGAAGTGTTTTTCATGCTGATCC AGTTATTCTTCACTATAGTAAGTAGCTTCAACTCTACTTCTGTCATTGTTTACTTCAGTTTATACTAGCAACAAACCCGT GTGTCTGCTAATTTTAAAATGATAGTCATTAAGTTATGTTCAACTTGGATTTATCAAATAATATTCTGTGTTTTGACTAA TGAATTGAATAAATCTGAGGAATGTAAGTAATGTAATTTCTTTTACTAGTTACTACAGAAAATTTGCTAATATATGAAAC TTAACTATGAAATCTTATATTTTATTATGTTCATGTTTCTTTCACCTCTGAAACAATACCAAAAAAGAAGAACAAAAAAA GTCCCTGTTAAGTTTTACACATCTTCCACCTCTATCCGGAAATACTACTTGAGTTAGCTGCTAAATTTCAAGTTACATGT TTGGTTATGGGTTAGCCACTCTTGTTTGACATGGAAAATTCCATATTCCTTGCATATATGGTCCCCAAACCCCAAATTAT TTTATTGCCTGTAATATATTATTTCTTCTGTCAACGTGTCTAGTCACTATTATTGGTAACAATTACTATTATTGTTATCT TCAGGAAATAATGAAGGTGGACGGATGATGCTAAATCAAACCTTCACAATTGGTAATTTTTATTTGTATATTATAAATTG TTATGAACTCTATGCCTATGGTTTGTTGTTTGTGGAAGTGGAAACTACTTATGCCTTTGCTCTTGATCTATGTTGCACGG GTTCTAATATCATATCTGATACAATGCAATGTGTCAAATGTCAATACGACATTGCAACATTGTCCTTTTAATTTTAGATA TGGGATGACAAGGTATATAAATATATTTTACAATATTTAAAATGTATAAAAATATTGTATGGTTTATACTCATTCCTAGT GTCAATTCAAAATCAACAATTATTGCCTTTCACCATTTCTCTCTCTTGGAAAATTCTCTCTTTCCCTTCCACTTCCAAAA TTCCTCCTTGCACAACATGAAAAATAACTTTGCCTATGCTTGCGTGGCCGGTCCTAAGCCCGGATAAATGAGCAGGGTAG TGTTAGGCCTTTGGCAGCCAATAAAAAACTGATTGATATCTTTAATATGGGTCAGTGATCCATATAGCCGACCTAACCTA GTGGGATAAGACTTTTGTTGTTGTTGTTGTATACATGAGAAGGGTTTTCAAATAATGAAGGTTCACAATTTACTTTCAAC TGTAAAATTTTGTTTTCGTTCAACCAGAGGACATGAGTAGCGTTCACTAAAATGGAAATAAATGTCACAATATGAGAATA TGTATGCATTGTGTGACACATGAAATGGTTGTCATGAGGAAATCATAACTTTGACATGCAATTAGCATCTTCCTTTCCAG TTGCTTTCGTGTAAAAAACCCTCAAGAATTGATTTTGTTATATCGATGATAATATTTTTCTTTTTCTTCACCTGGTAAAT ACAGAACCGATGCTGACCATGGGCAGCTTCAATCCTGTGATGTGGAATGACAATTGGACAGTTGTAACGGAAGATGGAAG CCTTTCAGCTCAGTTTGAACACACCATTTTGATAACTCCTGATGGGGCTGAGATTATGACTCAATGCTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0400100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGAGCGGCGCTTCACTTCAAAATTTAAGACTGAAAACTTCATTCATGGGAGATCGATTCCTACGCTGCTCAACGCT GCAACCCCTTCCTCATCTATTCCGTTACAATCCTGGAAGCAAACATGTCTCGATGCAGTTATCTCGATCACTTTCTGGTT TAACCAATCTCTTATTTAATAGAAGGAATGTAGATGAAGTGGCCAACAGCAAGCGAAAACGTCTCAGACCGGGGAAAGTT TCTCCGCAACTACAAGTGCCAAAGGACATACTACGGCCGCCATATGTAAAAACCAAGGTTCCGGCTGGACTTGTAAGTGG GCCTGAAGTGCATGATGAGAGGGGGATAGAATGCATGAGAGCTTCTGGAAAGCTTGCAGCACAGGTTCTTCAGTATGCCG GCACCTTAGTCAAGCCAGGTATAACAACAGATGAAATTGACAAAGCAGTTCACCAAATGATAATTGATAATGGAGCATAC CCATCTCCTCTCGGCTATGGTGGGTTTCCAAAGAGTGTCTGCACTTCTGTCAATGAATGCATTTGCCATGGAATACCAGA TTCCCGTGTGCTTGAGGATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAATGGCTATCATGGTGACACATCAG CAACTTACTTTTGTGGCGACGTTGGTGATGAGGCCAGAAAACTAGTTCAGGTAACTAAAGAATGCCTAGATAAAGCAATA TCTATATGTGCGCCGGGAGTGGAATTCAAGAAAATTGGCAAAACGATTCATGATCATGCGGATAAATATCGTTACGGTGT TGTCCGACAGTTTGTTGGGCATGGTGTTGGAAGTGTTTTTCATGCTGATCCAGTTATTCTTCACTATAGAAATAATGAAG GTGGACGGATGATGCTAAATCAAACCTTCACAATTGAACCGATGCTGACCATGGGCAGCTTCAATCCTGTGATGTGGAAT GACAATTGGACAGTTGTAACGGAAGATGGAAGCCTTTCAGCTCAGTTTGAACACACCATTTTGATAACTCCTGATGGGGC TGAGATTATGACTCAATGCTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0400100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASGASLQNLRLKTSFMGDRFLRCSTLQPLPHLFRYNPGSKHVSMQLSRSLSGLTNLLFNRRNVDEVANSKRKRLRPGKV SPQLQVPKDILRPPYVKTKVPAGLVSGPEVHDERGIECMRASGKLAAQVLQYAGTLVKPGITTDEIDKAVHQMIIDNGAY PSPLGYGGFPKSVCTSVNECICHGIPDSRVLEDGDIINIDVTVYLNGYHGDTSATYFCGDVGDEARKLVQVTKECLDKAI SICAPGVEFKKIGKTIHDHADKYRYGVVRQFVGHGVGSVFHADPVILHYRNNEGGRMMLNQTFTIEPMLTMGSFNPVMWN DNWTVVTEDGSLSAQFEHTILITPDGAEIMTQC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43330:SF8
39 352 314 2.0E-155 –
PANTHER
PTHR43330
39 352 314 2.0E-155 –
Gene3D
G3DSA:3.90.230.10
72 353 282 4.1E-122
IPR036005
SUPERFAMILY
SSF55920
73 352 280 1.02E-88
IPR036005
Hamap
MF_01974
108 353 246 40.576
IPR002467
TIGRFAM
TIGR00500
110 352 243 2.0E-88
IPR002467
CDD
cd01086
116 352 237 7.76788E-142
IPR002467
Pfam
PF00557
117 344 228 1.2E-55
IPR000994
PRINTS
PR00599
173 186 14 7.3E-19
IPR001714
PRINTS
PR00599
195 211 17 7.3E-19
IPR001714
PRINTS
PR00599
265 277 13 7.3E-19
IPR001714
ProSitePatterns
PS00680
271 289 19 -
IPR002467
PRINTS
PR00599
295 307 13 7.3E-19
IPR001714

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004177
Molecular function Aminopeptidase activity Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
Subterm of
GO:0006508
Biological process Proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
Subterm of
GO:0008235
Molecular function Metalloexopeptidase activity Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0400100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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