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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0407300 |
| Transcript ID | LotjaGi2g1v0407300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT5G67385.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q66GP0|Y5738_ARATH BTB/POZ domain-containing protein At5g67385; TrEMBL-Plants: tr|A0A0R0HCA2|A0A0R0HCA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0407300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90461997..90466274) extracted from Lotus japonicus Gifu genome v1.2.
CGAATTGTGGACAGGAATATGAAGGAAATTCCCCTTCCCATCATCCCATGTGGAAACAAACATCAACATGCAACGATCTC ATCCTCTCCACTCAAACCCCCAAGCACACACCACACACACAAAAAAGAGTACAATCTCCATGCTTCTATTTTTGACCCTT CTCTTATTTCATAATGTCGATTTTACCACTGACATTCCTTCCTCTACCCTCCACAGAACCACTTCTCTTATTTAACAACT AGACCCTGTTTTGGAATTTCACAATGTATGTTGATGATCATTTATAACTGATTTGAGGTTCAGGTTCTAACTCTATCCTC CTTATTTCCCCCGAATTTTCTTCAGTTCAGAATTTAAGACACCAAAACAGTTCCAAGGGATACAAAAAGTCATCATTCCC CTCAGCTTCATTCACTCTTTTCCCTGAAGAAAACGTAAAAATGAATCTTCAAAGGTGACCTTGAGTCTGTGCTATAACTG GCTCAGTTTGTCATAGCAAGCTAGAATTTTGTTGTCCTTGCCATGGTGGATCGTGGTCAAGGGAAAAAAACCACACCTGC TGCTATTGACTTGTCTCTGAAGAAGAAGGAGCTTCTTTCTAGTGCCATGAAAAGAACAAGTGAATGGTATGCTTATGTAA ATGTTCTTCTGAAACTAATGCTTTGATACCTTTTGAGTTTCAAAGGTACTTAACCTGTTTGATAGAATTTCTGAAACACA TGAGTTGTACTATTTGATTCCAGGATTTTTTCTCAGGAGATTCCAAGTGATGTCAGTGTTAAAGTTGGAGAAGCTACCTT TACATTGCATAAGGTAGTGAACCAATTCAAATATGTACTCGTTGCTGCATATATCAAACTAATTAGTCTGAGAATCATTG AAGTGTAGGATATCAATTTCTTACTCTTTCTAGTTGTCAACCAGTTGCTTAACCCAACTAAAAGCCAACGGAGGTCTTGA GTTGCTATCACATGGTGTCTTGTAACGCGAGTTCTCAAATTCCAATGCACTAAATGTAGTTTTCAATTGAAAACCAAACA TGATTACCAATGTTTGTCTTAACATTCAACTTCCATTACAATGTGTTGGAAAGTGTAATACCACTTTCTGAGAGAGAAAA TGTGAAAGGGGATATTATTTGTTGCATGCCATTCTTTTTGTTCCCAACTCTTTTGCTGCTTGACTACAAATAGTACATGG AATAGGAAGTAATACTTACAAAATTGTTATTTTGGACATCAGCTGATATTGAATTCTTCTACATATATTTTAATGTTATT GCAGTTTCCATTAGTCTCCAAGTGTGGATACATTAGGAAACTCGTCTCGGAATCCAGTGATGCTGACATTACCTTGGTTG AACTCTCTGATGTTCCTGGTGGAGCAGAAGCATTTGAACTGGCAGCAAAATTCTGCTATGGGATAAACTTCGAAATAAGT GTTGAGAACATTGCTATCCTTCGCTGCGTGGCAGAATATCTTGAGATGACCGAGGACTTTTCAGTTGGAAACTTGGTGGG GAGGGCTGATGCATTCTTGAATGAAGTGGCACTCAAAACCATCGCAGGGGCTGTGTCTATCTTACATGTTTCAGAAAACC TCCTTCCAATAGCCGAGAGAGCGAAATTGGTGAACCGAAGCATCGATGCCATTGCATATATAGTTTGTAAGGAAAGCCAG TTCTGTGCATCAGGAAGAAGTGAAAGTGGCTCTGATGGAGTGGCATCTTCTACATCATCTCACCAGAGGCCAGTTGTTGA TTGGTGGGCTGAAGATCTCACTGTCCTCAGAATTGACATTTTCCAAAGAGTTTTAATTGCAATGATGGCAAGAGGGTTTA AACAGTATGCTATTGGTCCCATTCTAATGCTCTATGCACAGAAATCTCTACGAGGTTTGGTGAGATGAGATCCCTCACTA AAAATATTCAAATGTTAAAAGTATGCATGGTTTTATGCATTGATCATTACTTAATTCTTTTATGTCTCTCTCTTTTTTAT TTCTTTGATTGGCAGGATATATTCGGAAAGGGAAGGAAGAAGATTGAACCAAGACAAGAGCATGAAAAGAGGGTTGTTTT AGAGACTCTGGTGAGCCTTTTACCAAGGGAGAAGAATGCAATGTCAGTAAGCTTTCTTTCTATGCTGCTTCGTGCGGCGA TCTATCTTGAGACAACAGTTGCTTGCAGGCTTGATTTGGAGAAGAGGATGGCCATGCAGTTGGTACAGGCTGTTTTAGAT GATCTTCTCATTCCTTCCTATTCATTTACTGGGGACACACTGTTTGATGTGGATACAGTGCTGAGGATCATGTCTAATTA CCTTGAATCTCAACACCACTCAATCTACAATGAGGATGATGAATACTTTTCTCCTTCACAAAGTGACATGGAGCGGGTTG GAAAGCTAATGGAAAACTACCTTGCAGAAATAGCAACTGATCGAAATTTATCAGTTCCGAAGTTCATCTCTCTGGCTGAA TTAATTCCTGAACAATCAAGGCCAGCAGAAGATGGGATGTATAGGGCCTTGGACATCTATCTAAAGGTGCACACTGCAAC CTTTTCTTTTTTTATCAATTTATTTTTTGATATATTAACACACTTTCTCTTCCTTTCCCTACATTATCTCTTCTAATCTC TCTTATTTTTTAATCACGTCGCTCATTATATTTCTCATTTCTCTATCTTATATTCCTATTTCTCTCGGGATATGGTTGGA TTTGGCGTGTGAATAACTTTTTGTTCATATCAAATTAATCATGCCACAAATTTAAACTGTACCAAGAAAATATTGTTTTT CTACTCCTGACATCTTGTTTGAGCATTAGGATCTCTCATGTCACGGGATTAAAATCTTTTGTCCCAGAAACGTGTCTCAT TATCCTTTCCAATAATAAAATTTTGACATATCAATTAAAAACCACCTGTAAGTTTGTAATTGCCCCACTCATATCATTTT TAATTGACATGGTGAGATATTATTGGTTGAATAGGAAATTGAAACATCATTTGAAGACAACAGATCTTGATCCCAGGTCA CTTAACATTGTCATTTGCAACTTTGTGACTCTCTCTATCTTCATAAATATTTAGAAAGAGATAAACACAAAATTTCAACA AAATCCCCAAATGAGAGAATTCTGATCCTTGTTTGAACAACAGAGAAAACACTCACATTTTACTAGTCAAGATTAAACAC CTATTTCCTACAGCACATTCTTCCGGGTTTCAGCTTTTAACATAATTTATTTGCTACATTATACAGTTGCATTCACAACA GTATTGCAATCATTCAGATTTAATTGTATTGCAATTTTGGTATAGATTTCTTTAACTTGAAGTTATTATGAATTACTGCT GATATGGTTGGAATTGAGAATTCTCAGGCTCATCCCAATCTAAGTGACATGGAGAGAAAGAAAGTTTGCAGTGTGATGGA CTGCCAGAAGTTATCCCGAGAGGCCTGTGCACATGCTGCTCAAAATGACCGGCTTCCTGTCCAAACTGTGGTTCAAGTTC TCTATTATGAACAACAGAGACTTCGTGATGCTATGAATGGCAGTGCAAGTGGGGAAGCTCCTTCAGTTCCCGCCAAGCTC AATGTATTCTCCAGTGATCTTCATCCGGTCTCAAATGAGCTTACCAGCTTAAAAAGAGAAAATGAAGATCTGAAACTAGA GCTAGTGAAATTGAAAATGAGACTAAAAGAGATTGAGAACTCCACAATTAAATCAGGAGCTAACAGTCCAGTTGTAAATG CTTCACCTTCTGGCTCTGCTGATAAGCCTCCCCTGCCTCGGAGACCATCATTCATAAGCTCAGTATCCAAAAAACTTGGA CGGCTCTCTCCATTCCCTCGTGCTGATGGTGTTTCACCTTTTGCCAAAGGTCGCACAAAGCCAAATAAGGATCGACGCCA CTCCATTTCTTGAGGCTTGATTGAAAGTACAGGCTACTCTTTCCTAGTTTTTGCTCCATCTGTGTGAGCCCCATGTAGAT TATATTATCATGATCATTCAGTAAGAACAATATTGTAAAGGGTTGTGAAAAATAAAATATGATTCTTGGGTTGGTTTGCA GTCTGGTTGTTGATTGGTAAAATCGACGCTGTGATAATGAAGGAATGTTAAACTAAATAGAAGAATCACAGTTATTCCTA TCAGTTGTAATACACCAGCAGCATTCTCTTTCCTTGAAACTAATGAAAGCATATAATGAGCAAAACAATGAAAAAATTGC TGAAAAAATTATTACTAATACACCAGCAGCATTTTCTA
CDS sequence (LotjaGi2g1v0407300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGATCGTGGTCAAGGGAAAAAAACCACACCTGCTGCTATTGACTTGTCTCTGAAGAAGAAGGAGCTTCTTTCTAG TGCCATGAAAAGAACAAGTGAATGGATTTTTTCTCAGGAGATTCCAAGTGATGTCAGTGTTAAAGTTGGAGAAGCTACCT TTACATTGCATAAGTTTCCATTAGTCTCCAAGTGTGGATACATTAGGAAACTCGTCTCGGAATCCAGTGATGCTGACATT ACCTTGGTTGAACTCTCTGATGTTCCTGGTGGAGCAGAAGCATTTGAACTGGCAGCAAAATTCTGCTATGGGATAAACTT CGAAATAAGTGTTGAGAACATTGCTATCCTTCGCTGCGTGGCAGAATATCTTGAGATGACCGAGGACTTTTCAGTTGGAA ACTTGGTGGGGAGGGCTGATGCATTCTTGAATGAAGTGGCACTCAAAACCATCGCAGGGGCTGTGTCTATCTTACATGTT TCAGAAAACCTCCTTCCAATAGCCGAGAGAGCGAAATTGGTGAACCGAAGCATCGATGCCATTGCATATATAGTTTGTAA GGAAAGCCAGTTCTGTGCATCAGGAAGAAGTGAAAGTGGCTCTGATGGAGTGGCATCTTCTACATCATCTCACCAGAGGC CAGTTGTTGATTGGTGGGCTGAAGATCTCACTGTCCTCAGAATTGACATTTTCCAAAGAGTTTTAATTGCAATGATGGCA AGAGGGTTTAAACAGTATGCTATTGGTCCCATTCTAATGCTCTATGCACAGAAATCTCTACGAGGTTTGGATATATTCGG AAAGGGAAGGAAGAAGATTGAACCAAGACAAGAGCATGAAAAGAGGGTTGTTTTAGAGACTCTGGTGAGCCTTTTACCAA GGGAGAAGAATGCAATGTCAGTAAGCTTTCTTTCTATGCTGCTTCGTGCGGCGATCTATCTTGAGACAACAGTTGCTTGC AGGCTTGATTTGGAGAAGAGGATGGCCATGCAGTTGGTACAGGCTGTTTTAGATGATCTTCTCATTCCTTCCTATTCATT TACTGGGGACACACTGTTTGATGTGGATACAGTGCTGAGGATCATGTCTAATTACCTTGAATCTCAACACCACTCAATCT ACAATGAGGATGATGAATACTTTTCTCCTTCACAAAGTGACATGGAGCGGGTTGGAAAGCTAATGGAAAACTACCTTGCA GAAATAGCAACTGATCGAAATTTATCAGTTCCGAAGTTCATCTCTCTGGCTGAATTAATTCCTGAACAATCAAGGCCAGC AGAAGATGGGATGTATAGGGCCTTGGACATCTATCTAAAGGCTCATCCCAATCTAAGTGACATGGAGAGAAAGAAAGTTT GCAGTGTGATGGACTGCCAGAAGTTATCCCGAGAGGCCTGTGCACATGCTGCTCAAAATGACCGGCTTCCTGTCCAAACT GTGGTTCAAGTTCTCTATTATGAACAACAGAGACTTCGTGATGCTATGAATGGCAGTGCAAGTGGGGAAGCTCCTTCAGT TCCCGCCAAGCTCAATGTATTCTCCAGTGATCTTCATCCGGTCTCAAATGAGCTTACCAGCTTAAAAAGAGAAAATGAAG ATCTGAAACTAGAGCTAGTGAAATTGAAAATGAGACTAAAAGAGATTGAGAACTCCACAATTAAATCAGGAGCTAACAGT CCAGTTGTAAATGCTTCACCTTCTGGCTCTGCTGATAAGCCTCCCCTGCCTCGGAGACCATCATTCATAAGCTCAGTATC CAAAAAACTTGGACGGCTCTCTCCATTCCCTCGTGCTGATGGTGTTTCACCTTTTGCCAAAGGTCGCACAAAGCCAAATA AGGATCGACGCCACTCCATTTCTTGA
Protein sequence (LotjaGi2g1v0407300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVDRGQGKKTTPAAIDLSLKKKELLSSAMKRTSEWIFSQEIPSDVSVKVGEATFTLHKFPLVSKCGYIRKLVSESSDADI TLVELSDVPGGAEAFELAAKFCYGINFEISVENIAILRCVAEYLEMTEDFSVGNLVGRADAFLNEVALKTIAGAVSILHV SENLLPIAERAKLVNRSIDAIAYIVCKESQFCASGRSESGSDGVASSTSSHQRPVVDWWAEDLTVLRIDIFQRVLIAMMA RGFKQYAIGPILMLYAQKSLRGLDIFGKGRKKIEPRQEHEKRVVLETLVSLLPREKNAMSVSFLSMLLRAAIYLETTVAC RLDLEKRMAMQLVQAVLDDLLIPSYSFTGDTLFDVDTVLRIMSNYLESQHHSIYNEDDEYFSPSQSDMERVGKLMENYLA EIATDRNLSVPKFISLAELIPEQSRPAEDGMYRALDIYLKAHPNLSDMERKKVCSVMDCQKLSREACAHAAQNDRLPVQT VVQVLYYEQQRLRDAMNGSASGEAPSVPAKLNVFSSDLHPVSNELTSLKRENEDLKLELVKLKMRLKEIENSTIKSGANS PVVNASPSGSADKPPLPRRPSFISSVSKKLGRLSPFPRADGVSPFAKGRTKPNKDRRHSIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 613 | 600 | 2.4E-289 | ||
| PANTHER | 14 | 613 | 600 | 2.4E-289 | – | |
| Gene3D | 18 | 130 | 113 | 1.0E-9 | – | |
| SUPERFAMILY | 26 | 128 | 103 | 3.45E-16 | ||
| CDD | 35 | 138 | 104 | 1.38291E-40 | – | |
| Pfam | 38 | 127 | 90 | 5.1E-6 | ||
| ProSiteProfiles | 43 | 111 | 69 | 10.427 | ||
| Pfam | 217 | 467 | 251 | 1.9E-90 | ||
| ProSiteProfiles | 217 | 491 | 275 | 90.837 | ||
| Coils | 525 | 552 | 28 | - | – | |
| MobiDBLite | 556 | 621 | 66 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0407300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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