Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0410700 |
| Transcript ID | LotjaGi2g1v0410700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heptahelical transmembrane protein 4; TAIR: AT4G37680.3 heptahelical protein 4; Swiss-Prot: sp|Q9SZG0|HHP4_ARATH Heptahelical transmembrane protein 4; TrEMBL-Plants: tr|V7CII3|V7CII3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0410700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90747156..90751755) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAAATTAATTGTAGTTATCCCTCACAATAAATGATTTATTTTGTAAGTAGTAGTAGTTTATTTAAAAGGAATTATTA ATTTTCCCCGGAAAGGCTGGCGTACTATGCTTGCACGGTGTCATGATAATAAAAACAAAGAAACTCAAAAAGTGATTTGA TGGTGGGTGAAGAAGAAGGTGACTTGGTTGTGGCATCTCCGCATCTCATCGAAGATTCTTCAGCCATTTGTGTCGTCGAC ATTTCTTGCGTGTCGTATCCAACAAACTCTAGGTTCGTTATCATCATCACCTTTCATCCCTTCAATTATTAGCTTTTTTG TTTCTTTCTCAATTCCCCTAATTCCATTCAAATTCATATTTCAATTTCATTTCTCTCTACCCTATTCCCCTTCTCGTTTC CCCTCCCTCTTCAATTTCAGGTATCTTCTTACCAATCATCTATATCAGTTTCTTATTAATTTCTCTTTTGTTTAATTGTG TTTTTTTTTCATGTTAGGTTATGGCCCGTGAAGATTCCGTTGCATTGATGGAGAACCAACGGGAATCTTCTGGAAGGGAA GGGAAAGGGAAACGGTTGTGGAAGAAGGTGAAGTACCAGCTCGTTGAGTATCACTCGTTGCCTGCTTTCTTGCGAGACAA CGAGTACATTCTAGGTCATTATCGATCTGAATGGCCTATGAAGCAGGTTTTGCTCAGCATCTTCACCATCCACAATGAAA CCCTCAATGTTTGGACGTAAGTCTTCAAACTTTGTAATTCAATTCAATAGATTCCTTATTCCAATGAATATTCCTTGATT TCCCTCCTATAAATTGATACTTGTAACTATATGTAGGTTGTAATTAGCTTTCTTTAGTTTCTTATATGATTTAGGGTCAG CTTATTTTTGCATCCAAAGATTTTCTAACATGCATACTTTATGAGATTTTGACTGTTTTATGAAAGGGCAATGCACTAAG CTCCCACTATCAATAACTGTGTTGAAGCAGGAAGGCAGTTTACCCAATCAGAGCTCTAGAAAATCAGTTCAAAGACCATC AATATCAATTTTGTTTCCTTTATAGTATTTATTTAAGATCAAATTGTTATTTTCTATTTTTCATTTTGAGTAGGGTTTAT CCTGTTAAATAGATCTTTTGACCCTTTGAAAGAAAAATTTAAGCAAGATTGTCCATTAGTGAATTATATTAAGTTAGACT CCCCTATTTTCTTTATTTGTTGTTTTTTTTTACCCTTTCCCCTGTCTCTCAGGTAGTTGACTTAAATATTATGCCAAATG CCATTAAGATTTTGACTATATATTTTTTGTTTCTCATTCTTTGTCTCTTTTGTAAGTATATAGGCCAGACGGTGACATGA GTCATGAGCGATGTTCGGTTCAAAGAAATATGCATATTTTGAGTTTGTACTTTTTCTTGTTCTCGATCATAAAATGATAA AATGTTATTTCGTGCAGACATTTGATTGGGTTCTTCCTATTTCTAGCATTGACCATATACACTGCCATGCAAGTTCCAAA TGTTGTAGATCTCGATTCACTGCATCATTTTCCGGACATCCTCAAGAAGGTAGACTTGCACAAATTACAATCAGAACTTT TGATGTGCCTACCTTCCATGCCTGATTTGCACAGACTCAGGGACGGAATCTCAAATTGGCATATTAAAGAACTTCTGTAT AATTGTTTGCCTGTAAGCTTTTCCACTGGCAACCAGACTGATGTTTGTGTTCTGGTAATTACTTTGCAACTGACTACTAG TCCCACTCCTCTTTTTTCCCCTTTGTTATTAGGGGAGAGGCAGTGTTGTGTTAAACTAGCTCTCTCAATGATATATCAGC ACGGTTTATTTTCTCTGTTTCTATTCTTGTGGATTTCTATCAGCAATACTGATCGATAAACAATTTGCTGGAGTACAAAT TATATGAGATGTATATTTCATCTGGGTTGGATAGAGTAAATGATATGGTAGAACAAATTCTAAAACTAAATCTTAAGAGT TAAACATGGTAGAGGAAAAACTACTGAATGATGAATGTATAATGTCATTTTGTGAATAATGTCCTATGCCTTCGTTCAGG ATTAAATATTTCATGTTTATCAATTCAAAGTTTTTCTGTACCTTTGTTTTATTCTTCTTTTTCCATTGATGCTTGACTAG ATTTTGGGAGACAATGCAACTTTGCTTATTTTTTTGTTGATTGTATGCAGCATAATGTAAAGGAGGACCTGGCAAACATA ATAGCACCATTGATGATTAGACCAATTACAAGGTGGCCATTTTTTGTATTTCTAGGGGGTGCCATGTTTTGCTTGCTGGC TAGCAGTTTTTGCCATCTCCTCTCTTGCCACTCTGAGCGCGTATCATACATTATGTTGAGGCTTGACTATGCTGGAATTG CAGCCCTGATAGCCACCTCTTTCTATCCTCCAGTATATTACTCTTTTATGTGTTATCCATTTTTCTGCAACCTTTACTTG GGCTTTATTACTCTATTAGGTATAGCCACCATCTTAGCTTCTCTCCTTCCGGTCTTTCAAACTCCAGAATTCCGCACCTT CCGTGCATCCCTCTTTTTTGGAATGGGATTGTCTGGTGCAGGACCAATTCTGCACAAGCTTTTTCTCTTCTGGGGCGAAC CTGAGGTATTCCATACAACTGGTTATGAGATTCTGATGGGTGCTCTCTATGGACTTGGAGCACTGGTTTATGCCACTAGG ATTCCAGAACGATGGATGCCTGGGAAATTTGACATTGCCGGGCACAGTCACCAATTGTTTCATGTATTAGTTGTGGCTGG GGCTTATACTCATTATCGCGCAGGGTTGGTTTACCTCAGGTGGCGCGACCTTCGAGGCTGTTGATTTGATGAGCAGATTG ACGGTTGAGTACTGTTGTTGTTATATAGCTGGTTAAGTATGTGCAAGTTTACAGTTTTAATTGGGGATGTTTTTTCTTTA AGTCAAACTTGAAGATGTTTATGTAAGTGTAACTATAGGTATTATGTATATTCACTTAGAATCTACATGCAGGTCATTAG GTCAACAATAAAAACTTCATGAGGGAAACAACTTCCTCTGTTTATGTTTGTGTTAGCTGATGTTTGTTTTCAGTTTGTAA ACCACTGAATGGATTTTGTCTTGGGCCGGGTTGAAATTATCTGAGACGAGATGGCAGGAATGGCCCAACCTGATTGCAGT TCATGGACCACATTATGGTGGTCCACAGATGTCCCAATATTGTGTACGGATACAAGCGCCATTATATTTTGGCAATCTGC ACTATAATCTCAAATCTTTTATGTAACGCAATGGCTTAATATGAGGCAGAGCCACATAAATCATTTAATTTGATGGGGAT GGAAATTTTACATGAATGAGGTGGCTACAAATTTGCATGTGAATGAGACATATAAATGACATGAGTGATGTTATATTCTC GTGCAAATCCTCCTCTCCCCAACAGATTTTAATCCTGTAGAGAGAAGGTCCAATTCCTAGATAAATTTTATTTTTGCCAT GTTTTAGTGGTAATGATGATATTTTATGTGTCGCGTTATCACTTATAAAAGTAAGGATAAAACTTAGATCAAGTTCCTTA CCTCCATTTCAAATTTTGACAAAAAAATCTTAATAAATGACATTTATATTTATAAATAGTTGCACATGTGACATCACATG ATTGGTAAACTTGATAAGATGAATTTAAGGAACTTGATCTAAGTTTAAGTTTCTCCCTAAAAGTAATTCATAGAAAGTAA AAGTTTTCACTCCAAAATAATGAGACCAAATCTAAAAAGTAAAAAACAAAGGGAAACAAAACTAAAAAGGCAATATATCA AACATTTACTTACGTGTCTGGAATGTGAGTAGCTCCTATTGTTTATTTAGTGTTTCTTGCTTTATATATTCATATGAGAT TCTTTGCCTCTTTGGTAAAGGAGGAATTCATTTAAAAGATAAGTACTGAGTGTGTTGTTGTTTACCAGTTTAGCTTTTTT GGCGTATTATCATGGGATTCTTTAAGACGCATGAAAAGGGAGGAGCTTTAATTAGTGCATGATTGAAGGCAATTCTATTT CTTATACACATGAATCATTTCGCCGGCCAATAGACTCTGTTACACGTCGTGAATATTGGGATACCACGTAGCTTCTTTTT TCTTCTCATTTGGAAAAGAAATGTGGAAGAAAAACAGTAGTTCTTTCTTTTTTGTCAATGGAAGAAAAAGAAAGTGAAAT GGCAGAAAAGATGTTCCTCAAGTTGAAGGCAACCGCATCATCGTTTACGGGTTTTGTGGACCTCTTTGAAAAGTGACGAG TCCATTTGTTGTATCTATCTATTCTCAGCACCCTCCTTATCATAATTAATTCCAGATACTTAGCTAGTTTTTCCTTGTAC ACCTTTTGGGGTATTGATTGTATCATTTCATCTTGTTGCCTTCAATAAGATAATTCCCGGCTGAAATGCCGGAGCCATCT TCTAATTGATTGTATGATAGAGTAGAATTGTAGACACCTATGGTAAGGACTTGAGGATAGATCCACGACTATCAATTCCC TCATGTACAGTCAATTTTTATATATTTATACACATTTTTT
CDS sequence (LotjaGi2g1v0410700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCGTGAAGATTCCGTTGCATTGATGGAGAACCAACGGGAATCTTCTGGAAGGGAAGGGAAAGGGAAACGGTTGTG GAAGAAGGTGAAGTACCAGCTCGTTGAGTATCACTCGTTGCCTGCTTTCTTGCGAGACAACGAGTACATTCTAGGTCATT ATCGATCTGAATGGCCTATGAAGCAGGTTTTGCTCAGCATCTTCACCATCCACAATGAAACCCTCAATGTTTGGACACAT TTGATTGGGTTCTTCCTATTTCTAGCATTGACCATATACACTGCCATGCAAGTTCCAAATGTTGTAGATCTCGATTCACT GCATCATTTTCCGGACATCCTCAAGAAGGTAGACTTGCACAAATTACAATCAGAACTTTTGATGTGCCTACCTTCCATGC CTGATTTGCACAGACTCAGGGACGGAATCTCAAATTGGCATATTAAAGAACTTCTGTATAATTGTTTGCCTGTAAGCTTT TCCACTGGCAACCAGACTGATGTTTGTGTTCTGCATAATGTAAAGGAGGACCTGGCAAACATAATAGCACCATTGATGAT TAGACCAATTACAAGGTGGCCATTTTTTGTATTTCTAGGGGGTGCCATGTTTTGCTTGCTGGCTAGCAGTTTTTGCCATC TCCTCTCTTGCCACTCTGAGCGCGTATCATACATTATGTTGAGGCTTGACTATGCTGGAATTGCAGCCCTGATAGCCACC TCTTTCTATCCTCCAGTATATTACTCTTTTATGTGTTATCCATTTTTCTGCAACCTTTACTTGGGCTTTATTACTCTATT AGGTATAGCCACCATCTTAGCTTCTCTCCTTCCGGTCTTTCAAACTCCAGAATTCCGCACCTTCCGTGCATCCCTCTTTT TTGGAATGGGATTGTCTGGTGCAGGACCAATTCTGCACAAGCTTTTTCTCTTCTGGGGCGAACCTGAGGTATTCCATACA ACTGGTTATGAGATTCTGATGGGTGCTCTCTATGGACTTGGAGCACTGGTTTATGCCACTAGGATTCCAGAACGATGGAT GCCTGGGAAATTTGACATTGCCGGGCACAGTCACCAATTGTTTCATGTATTAGTTGTGGCTGGGGCTTATACTCATTATC GCGCAGGGTTGGTTTACCTCAGGTGGCGCGACCTTCGAGGCTGTTGA
Protein sequence (LotjaGi2g1v0410700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAREDSVALMENQRESSGREGKGKRLWKKVKYQLVEYHSLPAFLRDNEYILGHYRSEWPMKQVLLSIFTIHNETLNVWTH LIGFFLFLALTIYTAMQVPNVVDLDSLHHFPDILKKVDLHKLQSELLMCLPSMPDLHRLRDGISNWHIKELLYNCLPVSF STGNQTDVCVLHNVKEDLANIIAPLMIRPITRWPFFVFLGGAMFCLLASSFCHLLSCHSERVSYIMLRLDYAGIAALIAT SFYPPVYYSFMCYPFFCNLYLGFITLLGIATILASLLPVFQTPEFRTFRASLFFGMGLSGAGPILHKLFLFWGEPEVFHT TGYEILMGALYGLGALVYATRIPERWMPGKFDIAGHSHQLFHVLVVAGAYTHYRAGLVYLRWRDLRGC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 74 | 74 | - | – | |
| PANTHER | 11 | 388 | 378 | 3.3E-196 | ||
| PANTHER | 11 | 388 | 378 | 3.3E-196 | – | |
| Pfam | 68 | 373 | 306 | 3.8E-70 | ||
| Phobius | 75 | 96 | 22 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 97 | 194 | 98 | - | – | |
| TMHMM | 195 | 217 | 23 | - | – | |
| Phobius | 195 | 217 | 23 | - | – | |
| Phobius | 218 | 228 | 11 | - | – | |
| Phobius | 229 | 247 | 19 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 248 | 258 | 11 | - | – | |
| TMHMM | 255 | 277 | 23 | - | – | |
| Phobius | 259 | 280 | 22 | - | – | |
| Phobius | 281 | 291 | 11 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 292 | 312 | 21 | - | – | |
| Phobius | 313 | 317 | 5 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 318 | 339 | 22 | - | – | |
| Phobius | 340 | 359 | 20 | - | – | |
| TMHMM | 360 | 382 | 23 | - | – | |
| Phobius | 360 | 382 | 23 | - | – | |
| Phobius | 383 | 388 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0410700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…