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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0411800 |
| Transcript ID | LotjaGi2g1v0411800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein PHLOEM PROTEIN 2-LIKE A10; TAIR: AT1G10150.1 Carbohydrate-binding protein; Swiss-Prot: sp|Q9SY57|P2A10_ARATH Protein PHLOEM PROTEIN 2-LIKE A10; TrEMBL-Plants: tr|K7LN24|K7LN24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0411800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90843982..90848148) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAATGAAAAACGGTATGTTGAGTATGACAGCTTCAAGGAAGAGTGAAGAAGATAACTGCTTCGATTGCTTCCACCC GTTACACACTTTCTCCCCGCAACGCCACCACCATCTCTCTCTGCTCTATCTATCTATCTATCAACATTCATTTCCTCTTC CATTTCCTGCAACATATTGATTCCAATTGCTGCAATGGAACTGCAATTTCGATTACCAGAATTGCAATTAGTTGAAAAGG GTTTTGATTACATCCGTAAAAGGAAGAAATGGATCTTCATTTCCGTTGCATTAGGGTTCTGCGCTTACAGTGCTTATCAC GCTCCCTCCATAGCTCGCAAGAGAAGGAAGCTTTCCAAGCTTCTCGGTGCCTTGTTTTCTGTAGCAGAAGCCGTAGCAGA ATCCGCAGACACCATCGGAGTTATCTCCAGAGACATGAAGGAGTTTCTGCAATCTGATTCGGATCAAGTGCCAAAGAGCC TCAACCAAATTTCCAAGGTAGCTCGCTCTCAGCAATTCTCCGATTCTCTTACCACCGTAACCCATGCCGTAACTGTAGGT GTATTGCGCGGTAACCAATCCGCGAACCGGACCAGCGCCGAGCAAACTGGCGCCGGTTCGAGCGTCGTGGACGGTGTTCT TGACAAGCTGTTAACACCGGAGGGGTCAGGGTTTGCTTCTGTGGTTCTTGGAAGCTTTGCTAGGAACCTGGTTCTGGCGT TTTATTGTTCAGATGGTGTTCAATCTCATGACAAATTCGGCGGAGAATCCAATTCAAGCGGTGTGGGAAATGCTTCCTCC AATTCAGATTCTGTTCCTGCATGGGTTGATGCTGTTTGTGATGAAAGGTGCGGGGAATTGATTGGGAATTGCGTTCAATT GTTCGTGAGCACCGCGGTTGCGGTTTTTCTTGACAAGACTATGCATATCAACACCTATGATCAATTCTTTGCTGGTTTAA CTAACCCCAAGCATGAGGATAGTGTGAGAGATATGTTGATGTCTGTTTGTAATGGTGCTATTGAGAGTTTTGTTAAAACA TCTCACCATGTGTTGACAAGTGCAAAACCCGGTGATGGTTCAGGTTCAGATTCTAATTTGGATATTGGGGAAACTACTCC GAATCGTGTAGAGACATCAACAATGGAATCAAAGGGAGGGGATGTTTGTGTTGAGGAAAATAAGAGTGGATGGGTCAGTA AGGTTTCATCCACATTGGCAATTCCCAGCAATAGGAGGCTTGTTCTTGATGTGACCGGGAGGGTGACGTTTGAGACGGTT AGGTCTTTCATGGAGTTTGTTTTGAAAACATTGTGTGCTTCTGTGAGAAGATGTGCTCATAGTGTTCACGATGCAGTACT TGAGATTATGAGATATGCTGCTGCTAAATTTTCTGTTATTGCGACAATTTGTATCTCATTGTGCCTGCACGTAATGGATT GCCCTAGGGCTTTGGTGCCTGCTTAAGTAGTTGTGATTGATCATTTGAACAAGAAGAATTTTATCATGCTGCTTTGGCTA TGTAACTACATCATAATATCTTTGTATATACATGGATTAATTTTGTAAATGATTTTGAAAATCTTACTGTTGTAAAGAAT ATACAGTGACCATAGGCATGATGTCTTCCTCTTACACTGGACTATCATTCATGGGATAACTAACTTCCAGAATTCCTTCA AAGAAGAAGCCCTGGCATTCATCATCAAGCAGTCTTATTTGCTTTGGGTTCAATCATCAATGATTACAGTATTGGACACA TTATTGAATTGGTATCTTGTTGTAAATACACCCTTCTGTATATGTTGTTGATTCGATATTCTATTGACCAGGTGTTCATG TTCAAATAGGTAGTCATTTTAAATCTGTTTCTTTCCTTCGAATATTACAACTCTGTTTCATGATAAAACTGGATCAGAGG GTGGACTGCTGAGTGAGATTACCTTATGCTTTGCTAACTCCATGCAGCAGGGGCGACGCGGCGACGCCAATGCAGCTGGC ATTTCACTGCTTTGCAATTATTCTGTATTTGCAATTATAAGGTTGTACTTCATAACCCCTATCCATAAGTTTTGCCATTT TTTTAGCTGACTGAGCCTCTATTATTCTTTATTTGTGCTTTAACTGTATTATAATTAATATGACACTTGTCTTGTTCTAG TAATATTCTTGTGCACGTCCCTAAAAGTCCTTTGCAGCTTTTGTGTTTTAGTATAAATAGGGAGCAAATACTAATACAAT AGAGAACAAAGAGGAGAGAATTATAGGGAGAGAGATAGATAGAGCTCACATGTGATTCATTACTCTTTCCCTTTAGTTGT AGTTATGGAACTCATTGATGTGATTATGATTGTTTTGATTTTTTTCTCATAAGGAACCAATCCTTCGGAGGAGGCTGAGG GTGAATGTTTTAATTTGTTTGTGGATTTTTTAATTATGTTTCCCCTTTTCATTTAGTTGGGTTTCTCCTATTGTTATGAT TGATATGCATTGGGAGCTGACAACTCTTGATATATAATTAGGTTATTGACTGAGTTGGTAAATAGCCCTGATTGTTTAAC ACAATTATAAGGTAAACCTAGTTTAATATTATGATTAGATCAAATATATAGCATGAGCAATCAATCTGATTGACTTTCCA GGTCAGTTAACTCCTTGAAGATTAACGTGGATCTTTATGAAATTTCTGTAAAGACCTGATAAGGAATTGAAGGACAAATC TATAATAATTAAGGATCAATTACTTAGTTATAGTAATAAAATGAGTGACTGACTTTTGAATTTAGGGTAAGATTTAACCA AATGAACCAAAACTTAACATGTGAAACTCAAAGTCTCAGAATTTTCATAAGTGATTCTTGGATCCTAATTATTTGATTAT GCTTCTTTATTATTACCCTTCTTATTCCAGTTCTCATGATGAAAATTTTATTGCTGGGTCGTAATAGTATAAGAAGTGTG CAAGACTAGTGGTTGTTAGTGATCTCATGAAAATGATGAATAAAGGAAGGGCTCCCCCCCCCCCCCCCCCTCTTCTCTCA GTTTTGCAATTACTCTGTATTTTCAATTATACACTTTTATAACCCATGTTCCTAAATTTGGCCACTTTATCAGCCGGCTA AACCTCTATTGTTCTTTATGTGCACTGATATTGGGCCCAAACGTAGCACAAGGAAGCCTAGCTGAATGAAAGACTTTTCA TAATCTCTTAAAAGTCTTTAGTCTGTTCTAGTCTTTTGTTTTCTTGAACATTTCATTCATTAGGATTTTACCACCTGTAT GGATGTAAAAACATGAATGTAAAGGGGAGGAAGAAATTGAGCATTTCCACTCCATTTTGGTGTGTTCTTGAATGTTTTTA CTTGCTTCTTTTGCTGCTTTGTTTTCTTTGGTTAGAAGAACAAATCTTCTTACCAATGACACTTGACATGTACCAGTAAT TTTCTTGTGTAAGTCCCTACACGTTCTTTGTTTCCTATTATTTTTTCATCATTACAATAAGCGTAATTTTTTATATCTGA CTGGCAATGACAGGGAACTGCACTAATGAACATGTATGATGTATAGTTTGCTTCATATCGTATGCGTTTAAGTAAGCTAA ACCTCACTTTTGTTTACATGTGATGGAACCACTATCATTATGAAATTATTATGGGGAAGAAGTTAGTTACATAATTGATA TGCCTTGGATAGGAAATGTAAGGGATTCAGGTAGTCTGTAATCTGTATGATGTAGGCGGTCCAGGTCGATTTTTAACATC TATTTTTCAAAAACTTCTCTAATCAATTGAGTCTTTCTCCCTTAATTTTCTCCCTTAATTTCAAGTGTATCATTTCTTAT TTTTTCAAGAAATGATGCTCCTCCAATATGTTCTGTTTATTGCTTATTTTTTCTTAAAACTAGAGTATAAATTAAGGTAT CATTTCTCTAGATTTTTCAGGCTACGCGAAGACAGTGTCAGTGCCTCAGTGGCATAAATATTGAGGAGTATATTAATGCT TGCAACAATAAGTCAACAACAAAAGGAAGTTTATTGCTTCGAGGTTTCTCTATCTGTCCTAGTCGAATGGGAAGTTTTAA ATAACATCTGAAATTATAACTTGAAGGCTTGAAGCTCAACTGCCAACCACTTTGATCAATCTTTTCAACTAAAGAAACTC CAAAAGT
CDS sequence (LotjaGi2g1v0411800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTGCAATTTCGATTACCAGAATTGCAATTAGTTGAAAAGGGTTTTGATTACATCCGTAAAAGGAAGAAATGGAT CTTCATTTCCGTTGCATTAGGGTTCTGCGCTTACAGTGCTTATCACGCTCCCTCCATAGCTCGCAAGAGAAGGAAGCTTT CCAAGCTTCTCGGTGCCTTGTTTTCTGTAGCAGAAGCCGTAGCAGAATCCGCAGACACCATCGGAGTTATCTCCAGAGAC ATGAAGGAGTTTCTGCAATCTGATTCGGATCAAGTGCCAAAGAGCCTCAACCAAATTTCCAAGGTAGCTCGCTCTCAGCA ATTCTCCGATTCTCTTACCACCGTAACCCATGCCGTAACTGTAGGTGTATTGCGCGGTAACCAATCCGCGAACCGGACCA GCGCCGAGCAAACTGGCGCCGGTTCGAGCGTCGTGGACGGTGTTCTTGACAAGCTGTTAACACCGGAGGGGTCAGGGTTT GCTTCTGTGGTTCTTGGAAGCTTTGCTAGGAACCTGGTTCTGGCGTTTTATTGTTCAGATGGTGTTCAATCTCATGACAA ATTCGGCGGAGAATCCAATTCAAGCGGTGTGGGAAATGCTTCCTCCAATTCAGATTCTGTTCCTGCATGGGTTGATGCTG TTTGTGATGAAAGGTGCGGGGAATTGATTGGGAATTGCGTTCAATTGTTCGTGAGCACCGCGGTTGCGGTTTTTCTTGAC AAGACTATGCATATCAACACCTATGATCAATTCTTTGCTGGTTTAACTAACCCCAAGCATGAGGATAGTGTGAGAGATAT GTTGATGTCTGTTTGTAATGGTGCTATTGAGAGTTTTGTTAAAACATCTCACCATGTGTTGACAAGTGCAAAACCCGGTG ATGGTTCAGGTTCAGATTCTAATTTGGATATTGGGGAAACTACTCCGAATCGTGTAGAGACATCAACAATGGAATCAAAG GGAGGGGATGTTTGTGTTGAGGAAAATAAGAGTGGATGGGTCAGTAAGGTTTCATCCACATTGGCAATTCCCAGCAATAG GAGGCTTGTTCTTGATGTGACCGGGAGGGTGACGTTTGAGACGGTTAGGTCTTTCATGGAGTTTGTTTTGAAAACATTGT GTGCTTCTGTGAGAAGATGTGCTCATAGTGTTCACGATGCAGTACTTGAGATTATGAGATATGCTGCTGCTAAATTTTCT GTTATTGCGACAATTTGTATCTCATTGTGCCTGCACGTAATGGATTGCCCTAGGGCTTTGGTGCCTGCTTAA
Protein sequence (LotjaGi2g1v0411800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELQFRLPELQLVEKGFDYIRKRKKWIFISVALGFCAYSAYHAPSIARKRRKLSKLLGALFSVAEAVAESADTIGVISRD MKEFLQSDSDQVPKSLNQISKVARSQQFSDSLTTVTHAVTVGVLRGNQSANRTSAEQTGAGSSVVDGVLDKLLTPEGSGF ASVVLGSFARNLVLAFYCSDGVQSHDKFGGESNSSGVGNASSNSDSVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLD KTMHINTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIGETTPNRVETSTMESK GGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSFMEFVLKTLCASVRRCAHSVHDAVLEIMRYAAAKFS VIATICISLCLHVMDCPRALVPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 15 | 423 | 409 | 5.2E-157 | – | |
| PANTHER | 15 | 423 | 409 | 5.2E-157 | – | |
| Phobius | 26 | 47 | 22 | - | – | |
| TMHMM | 26 | 43 | 18 | - | – | |
| Phobius | 48 | 394 | 347 | - | – | |
| MobiDBLite | 290 | 320 | 31 | - | – | |
| MobiDBLite | 293 | 317 | 25 | - | – | |
| Phobius | 395 | 414 | 20 | - | – | |
| Phobius | 415 | 423 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0411800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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