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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0413900 |
| Transcript ID | LotjaGi2g1v0413900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT2G22760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q1PF16|BH019_ARATH Transcription factor bHLH19; TrEMBL-Plants: tr|A0A151TJ50|A0A151TJ50_CAJCA Transcription factor bHLH25; Found in the gene: LotjaGi2g1v0413900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91135157..91143599) extracted from Lotus japonicus Gifu genome v1.2.
ATAACTTCTGTTTGTTTTCTAATTAAAAGGCAATCAAGAAGTATGGTGTGAGTAAAATGATTGAGCTCAAAAAGTTATGG TAAATTATTCAAACATTTTTGGTTAATTTAGAATTGACAGCCTAAACATTTTTGGTTAATTTAGAATTGACAGCCTAATC TGTCCACAATGCAACCGAGGTATCCAGTAGCTAGTGTTAATTTGTCGTAGAAAACAAGTACAAACAAACAAATTAGTCAA TTAAGGACACTGCTAATTACAGTTTAGTACTCAGCTAGCTAAGATTAAGAATATAATACAGATATACTGTAACCACGTGC TGTTTACTAATAATCTGCACGTACCTAACCTACCACTTTCTAAAAAGGATATTTATATTTATATGGGGGGCCACTTAGAC TATTCAGCAATCCCACTGTCGCTGTAAGAAGGTATTGTTTTCATTTCCAGTTTGGACTTTGGAGTATGCATGTGTTGCAT TTGTGAAAATGTCTAAACCAAATGCCACAACTTTTTTCTTTTGTTTCAGGTTCATTGGTCCCTATTGCAGCTAGCAGAAT GATGTCACCAGAGGAAGAATCATGGACTAGTTGGTTGTGTGACTTGGTAAGTTCAACATGATTCATTTTTATTTTCAACT GCATGCATTTTTTTGTGACCAAAACAAAACTAACTCAAGTAACTACTAACTAAGTACCCTTTTCCCTGTTTTCCCAGGAA CTAGAGGATTGCGACTTCCTCAATGAACCTGACACAAACTGGTTAGATGAGAGTTTCCTGTCTGAAGACTCTGCTCCACA AGAGCTGAACTTGCAAACATCTTTCTCTAACGATAGCAACCACTCTTGCTCCACCATGAGCAACTCCTCCTCAGGGGATG ATGATGATAACAGCTCTGAGAGGCCTTCCAAGACACTCAAGAATGATGCTTCTCCCTGCTACATTTTTTCATTTACCAAT GAGAATCCAGCGCCAATATTAAACTTTGAATCAACTTTGAAGCCAAAAGACAATGCTGTGAATGTTAATCATCATGAGAA CAGGTCTAATTTGCCCTCAAAGAGGTCCTTGGAAAGTCAAAAGAAGGAACCAAAACGCAAAGTACAGGAGAGGGAGAGGG TCAGATCTCCTCACCAAGCTCACGATCACATTCTTGCTGAGAGAAAGAGGAGAGAAAATATTAGCCAGCAGTTTATAGCT CTTGCAGCTCTTATTCCAGGCCTCAAAAAGGTTCAAAATCTAAATTTCTTTCTCTTCTGAATGCTCATTACTTGAGTGGA TGCATTTTCTCTATGTACTGATTATTGAAGGGTGTGTAATGCAGATTGATAAGGCCTCTGTGCTGGGGGACGCTATACAG CATGTGAAACAGCTCCAAGAGCAGGTGAAGCTACAGGAAGAGCAAACCAACAGGAAAAGCACAGAGTCAGTGGTGTATTT TGAGAAATCTAAGTCCTCTGTGGACGAAGATGTCTCAGACACATCCTCAAATTCAGGCAGAGAAAATAATGGTTCACTGC CTGAAATTGAGGCAAGGATGTCAGAGAACAAAGTGTTGATCCGAATCCACTGTGAGAAACAGGAGGGGGTGCTGATGAAC ATACTCAAAGAGATAGACAACCTTCATCTATCAGTGATCAATAGCAGTACCTTGCTTTTCGGGACCTCCAAATTGTACAT AACCATCATAGCAGAGGTATACACTATTACTACTTTTGCTCAGAAGTACCACATTAATTTGAGATATGACCAAATAAGTT TTTGTATAGGGTAATGCAATCCACACTCCTCAGCTATAGCTTTTTAATTAGACTAGAGTAATGTATCCAGATTTCTTCTT CCATCATTTTCCTCCCAAAACAAACTGAGTGTTAGTCCCACATTGTTAATGGAGTTTTACATTAATTAAAAGTGAACTTG TTGAGAACAATATGTAAAATGAGACCTATGTAACTAGATTTACAGAGGATCGAGATGTGTTGTCAACTTGTCATGTTCTC TTGATGTCTTATTTTACTAGCCTATTGTCACTTGGTCTTGTCTCCCTAAATTATAGTAAGGGTGGATGTGATTTGGAACT ACATACAGATATAATTTTGTTAAAGCTGTTGCAAATGCAGATGGATGATGAGTTGAGGCTGAGCGTGAAGGAACTGGCAA TAAAGCTTCGAGTGGGGCTCTTGCAATTCATGCAGTAGCATTCATTCAGTTAATCGTCTTGTCATTAGCCATCCCTCACT TTAAAGTTTAATGTATTATGGATTCAATAAATGTCCACTTTCTTAGTATCAATAATAATAATTAGGTTCTCATTATCTTA ATTATTCAGATTTTGTAAATCTGTTGTTGACCCATTCTTTAGTCAAAAGTCTATTGACTTATTCTTAGGCAAAAGATAAG CGCATGATTAGAGGAGAATCAATAGGAATTTGATAGCTTGATTCACTCCCAATCTTGTCTGCTATCTTGTATATTTAAAC TGACAGCAACAAATAACAATGATCAAGTTTTCCAATTACAGTTTATTTCTCTATATGGTATCAGTCAGAAACGATCCAGC CCCTTCTCTCTAATTCAGAACGCTGCTCCTCACCCTTGCCTCCAATGGCCAGTGACAGCACCTCCTTCATCTCCAACCCC TATGAGCCATCCAAACCCTTTGCTTGTATCACTCTTATCAGTGTCACCAAGCTTCTTCCCACCAATTATATTAATTGGAA ACTCCAAGTTGAAGCTCTCCTTGATGGCTATGATCTTCTCCAATATCCAGATGGATCCTTCTCCGCGCCGCCGGCATCGA TCTCCACCACTGGAACACCTCCAGTGACAACCCCAAATCCTGCTTACCAGACATGGCGTCGACAGGACCGCCTCATCTAT GGCGCTCTCCTCACCACTCTCTCCAACGAAGTGGCCTCTCTGGTGTCTCAGACAAAGACCTCTCATGATCTTTGGACCCT CCTCAAGAACACATATGCCAAAGCATCCCGCAACCATCTCAAGCAACTAAAAGAGCGTCTCCGTATGGCTTCCAAAGGTA CCCAATCCATCACAACCTATATGCATTCTCTGAAGCAAACGGCAGATCTTCTTGCATCACTTGGATCTCCTGTCTCTGTT GAAGACATGATTGATCATGTCTTGCGCGGCCTCGACGACGGCTACAGAGCAGTCATTGATGGCGTGAATGCAAGGGATAC CCCAATTACCTTTGATGACCTCCTCGAGAAGCTGCTCATCCAGGAACTCTCCATTGTTGCTGCTCAGAGACAAACTCCTG CTCCCCTTACTGCCTTGAATGCTCAGGCTCGACCCAACTCCAACAACCAGTATCGATTTGGTCAATCCTCTGCCCAGTCC AATCAACGCACCAGCAACCGCAAACCGTTTTTAGGCCGCTGTCAATGGTGCAATGTCAAAGGCCATGTTCTGTCTCAGTG CCACATCTTCAAACAGCAACATCCCGGTGTCCCGCCGCCCCCTCGGAACTCTCCGACGTACCCTGGACAGGCTCAGGTCA ATGTTGCAGCTGCTGGCCCACCTCAGACTGATTTTTTGGTTGACAGTGGAGCAACGCATCACGTAACCAATGACCTTGAA AATCTGGCACTCCATCATCCATACACCGGTCCTGACTCGCTGTTTATGGGTAACGGTTCAGGTTTAAACATCTCTCATTC TGGAACACTTTTACTTAATGATTTATCCCTGTCTAATGTTTTGTGTGTTCCTTCCATGAAACAAAAAATCATCTCTATCT CTAAACTTACCAAACAAACTAACTCTGCTGTTGTTTTCCTTCCAAACTCTTTTCATGTGACGAATCTGCAGACGGGCCAC ACAACCCATAAAGGATCATGTGTCGATGGACTTTATCTCTGGCCCTCCGCCTCACCATCCGTCCACACCGTCCGCACGGA ATCCTCTGCGTCATGGCACCATAAGCTTGGCCACCCTTCATCTTCCATTTTCAAATTTCTTCAACAACATTTTTCTTTGG GTTCAAATAAATTCCAGTAATCAAATTGCAACTCCTGCCAGATTAGCAAAAGTCACAAGCTTCCTTTTCATGAGTCCACT CTTACATCTTCTTATCCATTGGAAATAATTTTTTCAGATGTATGGACTTCTCCTATTTTATCAATTGATGGTCTTCGTTA CTATTGCATGTTTGTTGATCATTTTACTCGCTATATCTGGCTTTATCCAATAAAACGCAAATCTGATGTGCAAACTATAT TTCCTAAATTTAAATCGCTCATTGAAAACTTTTACCACCACAAAATAAAAATCTTATACACAGATAATGGTGGCGAATAT ATTGGCCTTCGTCCTTTTTTAACCACTCATGGTATAAGTCATCACACCACCCCACCTCATACACCTGAACACAATGGAAT CTCAGAACGCCAGAATCGCCACATAGCTGAAACCGGTCTCTCTCTTCTCCACCACTCGGGCTTGCCCCTAACCTATTGGC CTCACGCCATGACCACTGCAGCCTACCTCATAAATCGTCTCCCAACTCCTATTCTTGAGTACAAATCACCTTATTCCAAG TTGCTCAACATTAGCCCGGATTATCATAAGTTAAAATGTTTTGGATGTTTATGTTTTCCCTGGATTAAACCATATACTAA CCATAAACTTGCGCCAAAGTCTGCTATGTGTGTTTTTGTAGGTTACTCGGCTGATCAACATGCGTATTTGTGTCTTGATC CCACAACAGGAAAGATTTACACCTCTCGCCATGTGAAGTTCGTCGAATCTGAATTTCCATTCAGCTCCCTAGTTGCTAAA TCATGTCCGGGTGCAGAGCAACAAACAGGCCCACTCCAACTCTCCATTTTACAGCCTATAACCCAACCCACTGTGAGTAC CACTCTAAACCCACTGGAAGATTTCTCCGCTGCCTCTTCCTCTCCATCTACCAACACCACTCAATCTCCCCCTCCAACCT CACAACCGTCACCACAACTTCCTGCCCCACCATCACCACCCGCTATCAACCCCAACGGCGGTGGGATCATCACCCGGTCT AAAAACAACATCGTCAAACCCCTCAAAAAGCTCAACCTTCATGTCCAATCCTCCTCTCCCATCGAACCCAGCACCATCAC CCAGGCTCTTCGTGACCCTGATTGGCGCTCCGCCATGCAAGCCGAATTTGATGCCTTAGACCGCAACAACACTTGGGATC TTGTTAGTCGGACCTCTACTCAAAATTTGGTTGGCTGTAAATGGGTTTTCCGAATCAAACGGAATCCGGATGGATCGATT GATCGTTACAAGGCTCGGTTAGTCGCCAAAGGTTTTCACCAGCGCCCTGGTTGGGACTATACGGAAACATTCAGCCCAGT TGTTAAACCGGTGACCATTCGTATTGTACTAACACTTGCAGTACGCCAAGGATGGTCCATACGTCAGCTTGATGTCAACA ATGCGTTCCTTCAAGGGACACTCAAGGAAGAAGTCTTCATGCTACAGCCACCTGGTTTTGTCAACAAAACCTTTCCTGAT CATGTCTGTCGCCTCACAAAGGCACTCTATGGACTAAAACAGGCACCTCGTGCTTGGTATACGGAGCTTCGAGTATTCTT GCTCTCCCTTGGCTTTGTCAATTCCACTGCAGATTCATCTCTATTCATATACCAAAAACCGGGCGTTACACTGTACTTAT TAGTATATGTTGATGATATAATTGTCACTGGGAGTTCCTCTGCAGAGTTGTCCAAAATCATTGCCACACTTGCTGCTCGT TTTTCATTGAAAGACCTTGGATGTCTCAGCTATTTCTTAGGTGTCGAAGTCATTCCTTCCGCTACAGGTATGTTTCTTTC ACAAAGGAAATATATCACTGATCTGCTCCATAAATCAGGCATGGCAGATACGAAACCAGCATCCACTCCCTTGTCTGCGA GTGTTCCATTACTCAAGGATTCAGGTGATCTCCTGCCTTCCCCAACTGAGTACCGAGCACTGGTTGGAAGTCTTCAATAC TTGAGCCTTACACGCCCAGACATCGCCTTCAGCACCAACAAACTTGCACAATTCATGCAGAACCCAAGAACGGCGCATTG GTCTGCCCTCAAAAGAGTGCTCAGATATTTGGCGGGCTCTTGTGACAAAGGAGTCTTCATCTCAGCGACTGCCCCGCTGA CCTTTCATGCCTACTCGGATGCGGATTGGGCGGGTGACAAGGATGATTATGTTTCAACCACTGGTTACTTGTTGTACCTC GGCAGCACTCCCATCTCTTGGAGCTCTCGAAAGCAACGTTCAGTTGCTCGATCATCAACAGAGGCAGGATATAAAGCCTT GGCTGACACCGCTAGTGAGCTCCTATGGGTCCTTTCCTTGGTCACACACCAACCGCCAATCCGGTGATATATTGTGACAA TCTCGGTGCCACAAATCTAAGTGCTAATCCTGTCTTCCATTCTCGGATGAAACATATAGCCTTAGCATATCACTTTGTCC GAGAAAATGTTCAACATGGCAAGTTTCGAGTGTCCTTTGTGTCTACTGATGATCAGCTTGCTGATGTTCTAACCAAGCCT CTACTTCGCCCTCGGTTCGAGTCCTTACTGTCCAAGTTGCATCTCTCTTCCAGATTATACAACTTGCGGGAGGATATCAA TAATAATAATTAGGTTCTCATTATCTTAATTATTCAGATTTTGTAAATCTGTTGTTGACCCATTCTTTAGTCAAAAGTCT ATTGACTTATTCTTAGGCAAAAGATAAGCGCATGATTAGAGGAGAATCAATAGGAATTTGATAGCTTGATTCACTCCCAA TCTTGTCTGCTATCTTGTATATTTAAACTGACAGCAACAAATAACAATGATCAAGTTTTCCAATTACAGTTTATTTCTCT ATACTTAGCAGTTGCCACGTGAGTAATAAAAGTTAGGCAAACTTAAAAATGCTGTTTGTGTTTTAAACATCAGCCATGCC CCCCACTTATAGACCAATAGCAAGATGCCTAGTGTAATAAATTGCCATGTCATCCGTTTGACCAGTAAGTTTTATTTTCT AAATTTGGGTCCCTAATATTTTTAAGTTTTGCATTATATCCCCCAACTAATTACACTTTTTAATTATTTTTGAAATTAAA AATAGAATTCATTAACCTAAAACCTTTCTTGCCCCTGCTACATCGTGTTGCTCTCTTCAGCCACAGCCTCCTCGACGGTG GTGGTTTCAGCCGCAGCGGTTCACCTCCTCGTCACACGGGTGGTGGCTTCACCACCGTGTTCCAGCTTCTGGGTCTCAAC CGAAGTATTCCTCTGCCTGCAAGTCCTCCTCCCCCTAAGCGAATCATCTGCTGCAAGGCACCCTTCGTAGCCGCCGCAAG CCCTGTTTATTCCGACCAGAAGCACCTTCGCCGCAAGCTACTTTTCATCCATCGCAAGCACGCCTCAGGCACAAACTGGC GAGCCTATGGACGCTCCTATCACATAGGATTGATACTTGATAGATATTTGTACTACGTAATCAATACTTAAACTTGCTCC AGTACTTGATATTTGCGTCCATTTCATGTAGGAGGGACCTTGCTTACAGAAAATCCGATCAAAGAGATTGAGGAGTTTGT GCTTCGGACAGGAAGTCTACACCCACTGAGGTTCATCTGATCCGGACAATTATTTTGCTTATGTGTGTATTCTGAGTACA TATCAATTGTCTGTTTTTTTTTTATCTCAAACGAAAAGATTTTTGAACTTTTAATTAAATTATCTGGGTTAAGTTGCTTC CGAGGCTCTGCTTGATATATTCATTCATGTAGGTTCTTGTAATTTAATGGAATTTACATAGTATTGTAACAATTTAAATT CAATTAGTTTTTTAAATTTTTCTTCTATGTTTCAGATGTGCAAATTATGGGAGGTTTAGCATGGAATCTGGTTCATCCAA TTTGACAGAACACAATTTCAAAGTGATAAAGCTAAAGCAGTGCATATGCAATTTCAAAGTTCTAGGAAGTCCCAAGTTGA CGGACTTGAAGTACTGCAGGGGCAGCAAAGAATGGTTAAAGTGGAACAAGACAAACTTGCCGTACCAACCTTCTTTTGAA GTGTTTTATTGATCATTGGAAGTCAGAGCTGTTTAATCTCCTGCATTTTGCTTCTGAAACAGTGGAAAATTCAGAAAAAC TTGTAGAATACAGAATGCTTTGAAGAGTGGTAGAAGATATTGCTCCCCTTCTTTATGGACTTGTTGATATAGCATGACTG CAAAGCAATTGCATGCCATTTTCCATACAAAATTGTAAATTGATCTCATTAACTGTCATATTGTATGTTTCAACCAATAC AATTATGTCATGTTAACTAAAAATGCATGGATATGACATTTTTATAACCTTACATGGTGGTTTTTAATTGCCATGAGACA ATTTCATTGGTGAAAGAGGATATGAGATATCATTTAGGGATTG
CDS sequence (LotjaGi2g1v0413900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAACTCCTCCTCAGGGGATGATGATGATAACAGCTCTGAGAGGCCTTCCAAGACACTCAAGAATGATGCTTCTCC CTGCTACATTTTTTCATTTACCAATGAGAATCCAGCGCCAATATTAAACTTTGAATCAACTTTGAAGCCAAAAGACAATG CTGTGAATGTTAATCATCATGAGAACAGGTCTAATTTGCCCTCAAAGAGGTCCTTGGAAAGTCAAAAGAAGGAACCAAAA CGCAAAGTACAGGAGAGGGAGAGGGTCAGATCTCCTCACCAAGCTCACGATCACATTCTTGCTGAGAGAAAGAGGAGAGA AAATATTAGCCAGCAGTTTATAGCTCTTGCAGCTCTTATTCCAGGCCTCAAAAAGATTGATAAGGCCTCTGTGCTGGGGG ACGCTATACAGCATGTGAAACAGCTCCAAGAGCAGGTGAAGCTACAGGAAGAGCAAACCAACAGGAAAAGCACAGAGTCA GTGGTGTATTTTGAGAAATCTAAGTCCTCTGTGGACGAAGATGTCTCAGACACATCCTCAAATTCAGGCAGAGAAAATAA TGGTTCACTGCCTGAAATTGAGGCAAGGATGTCAGAGAACAAAGTGTTGATCCGAATCCACTGTGAGAAACAGGAGGGGG TGCTGATGAACATACTCAAAGAGATAGACAACCTTCATCTATCAGTGATCAATAGCAGTACCTTGCTTTTCGGGACCTCC AAATTGTACATAACCATCATAGCAGAGATGGATGATGAGTTGAGGCTGAGCGTGAAGGAACTGGCAATAAAGCTTCGAGT GGGGCTCTTGCAATTCATGCAGTAG
Protein sequence (LotjaGi2g1v0413900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNSSSGDDDDNSSERPSKTLKNDASPCYIFSFTNENPAPILNFESTLKPKDNAVNVNHHENRSNLPSKRSLESQKKEPK RKVQERERVRSPHQAHDHILAERKRRENISQQFIALAALIPGLKKIDKASVLGDAIQHVKQLQEQVKLQEEQTNRKSTES VVYFEKSKSSVDEDVSDTSSNSGRENNGSLPEIEARMSENKVLIRIHCEKQEGVLMNILKEIDNLHLSVINSSTLLFGTS KLYITIIAEMDDELRLSVKELAIKLRVGLLQFMQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 269 | 269 | 1.4E-102 | – | |
| PANTHER | 1 | 269 | 269 | 1.4E-102 | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| MobiDBLite | 58 | 104 | 47 | - | – | |
| Gene3D | 86 | 156 | 71 | 2.7E-15 | ||
| ProSiteProfiles | 93 | 142 | 50 | 14.519 | ||
| SUPERFAMILY | 97 | 159 | 63 | 3.14E-16 | ||
| CDD | 98 | 147 | 50 | 1.04064E-9 | ||
| Pfam | 98 | 143 | 46 | 2.6E-9 | ||
| SMART | 99 | 148 | 50 | 2.8E-13 | ||
| Coils | 132 | 159 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0413900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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