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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0415400 |
| Transcript ID | LotjaGi2g1v0415400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aluminum activated malate transporter family protein; TAIR: AT4G17970.1 aluminum-activated, malate transporter 12; Swiss-Prot: sp|O49696|ALMTC_ARATH Aluminum-activated malate transporter 12; TrEMBL-Plants: tr|I1J9K0|I1J9K0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0415400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91318883..91322001) extracted from Lotus japonicus Gifu genome v1.2.
CTCATATCACACATTAGACTCCCCAGTGTCAAAAAATACCAGTTCCTTTGCCCATTTTCACAAGACATTTAATTTTCTAT GGCTACTTGCTATTGGGATGAAACATAAAAGACCATTTGAATTTCCATGATCTTCTTCACCTCCTATTCCCATATGTCTC GGTCTAATCCCACACATTAAAATGGTCTCTAAAGTTCATGCTGGCAAGGAAATGGCAATGGCTGGGAATGACAATGAGAA TGAGAATGAAAATGGCAGAATCACTTGGAACTGGAAGAAAAGTATGCATGTTTTCTGTGATAGGTTGATGAGATATCCTA GTATGGCATGGCAGACTACATGGAAGGTAGGAAGTGAAGATCCAAGAAGGGTCATCCATGCATTGAAAGTGGGTTTGTCT CTTGCTCTAGTTTCTCTGTTATATCTGTTGGAGCCACTCTACAATGGGATTGGACAGAGTGCTATTTGGGCTGTCATGAC GGTAGTTGTTGTGCTTGAATTCACCGCAGGTGCATATTTTTCTTTAACCTCAATTTATTCCTTCACAACCTCTGAGTCTG CCCCGCGATGTACACGTAAAGCATTTCCTTGCCCCTACAGTAATTTCCCTTCCCCAGACTCTATCCCAAGACTCGAGGGC TAAATTACTTGGGCATGTAAGTCTAGTTCCAATTGAGCTATCAAAGGTACTTAGTCCTCAGCTCCTAGGATCCCCTTATG GGTAAGGTAAAGTACTCGCTCGAGGGGACGGGGAAATGCTTACATCACAAGGCATGCACATAGGTGCTGAAACTCGGATG TTACATTAAAGCTAGACATTAGTCCTTCTTGCATGAGTTTGATGACCTTAAATTTTCATAACTTTGTTTTGGTTGCAGGG GCAACTTTATGCAAAGGGCTCAACAGAGGATTAGGGACACTTTTAGCAGGATTATTGGCTTTTCTTATTGGGTACATTGG AAAAGCTTCTGGTCGTGTCTTTCAAGCTATCTTCATCGGTGCTGCAGTTTTTCTTATAGGTATATTAATGGTTACACCTT ACAAGTAGTAACTTTTATAATAGTGAGAACTAACAAGCTTGTGATGACTACGCATTATATTCTTAACTAAATATGTGCTT TTTCCTGTGGTTTTGTTTTTGCAGGAACTTTGGCTTCTTATATGAGGTTCATTCCGTATATAAAGAAGAACTATGACTAT GGTCTAGTTATATTCCTCTTGACTTTCAACCTGATTACTATATCGAGCTACCGGGTGGAGAATGTGTTGAAGATTGCACA TGACCGCGTATACACCATTGCCATAGGATGTGCCATTTGCCTTCTCATGAGTCTACTGGTATTTCCAAATTGGTCAGGTG AAGACCTCCATAATTCCACCATTTACAAGCTTGAAGGCCTTGCCAAATCAATAGAGGGTATATACTGTTCTCGAAATTCT ATTTGCCTTTGCCTGAGAAATTGAATTTGAATTAACACCTAGTCTAGGTAAAATCTTGCAGCTTGTGTGAATGAGTACTT CTATGGAGAAATTGAAGCCTCTGGAGATAACAAATCATCAGAGGATCCTATATATAAAGGTTACAAGGCTGTTTTGGATT CAAAATCCACAGATGAAACATTGGTTAGGCCATTTGTCATCTTTTGAATCATTTCATTAAATTCCAAAAAGCATTGAAAA CAGATAATTTATTTCTTCGATTTTGAGTTGGACAGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCAAGGTACTGTCAC AGGTTTCCATGGCAGCAGTATGTAAAAGTTGGAGCTGTTCTTCGTCAATTTGGGTATACTGTGGTAGCCTTGCATGGCTG TTTGAGAACAGAAATTCAGGTAACACTTGAGTTGTTTCATAAATTTGACCTCTTATTTTAGTCTTAGCACAAGGTAAAAA GTTGCTGCCACGTCACGGGTTTAAGTCCTGGAAACATCATCCTGTATAAAATGTAAGGTAAGACTGCATATAATAGACTA GGTGGTCGACCCATTTCTTGGACCCTGCTCATAGCAGGAGCTTTAATGTATCAGGTCCATGATAGTATGTTGTTACTTGT GATCAATTTGGATCATTTGGACTCAATTAGTAAATGAAATTAGATGATTGTTATTTTTTTCAATCCCTCTAAATATTGTT ATTTATACCCTTTAACTTGAAAATTTATTTTAGACACCACGATCTGTTAGAGCCTTGTTCAAGGACCCCTGCATTCGGCT TGCAGCAGAGGTATCCAAAGTACTGATAGAACTTGCCAGCAGCGTAAAGAATCGCCGCCACTGCTCGCCAGAAATACTCT CCGATCATCTTCATGAAGCCCTACAGGACCTCAACACCGCCATAAAATCTCAACCTCGCCTCTTCTTAGGCCCCAAGCAC AAACATAACCATGCTTCCAACATGCTCAAAATAGCAGCTGCACAAGTCGGACACGAAAGACATGGAAAAACCTCTGGATT ATCAAGCGTTAAAACTGACTCTTCTGCATTGCTAGAATGGAAAACTAAAAGGGGTTCGGCTGAACGGTTAAAGGAAACAG AACGGAAATCTTTGAGACCTCAACTGAGTAAAATTGCAATCACTAGTCTTGAGTTTTCTGAGGCTCTTCTATTCGCTGCT TTTGCGTCTTTGCTTGTAGAAACTGTGGCGAAACTGGACCTTGTCATAGAGGAGATTGAAGAACTGGGGAGATTAGCGTG CTACAAGGAGTTTATACCCGGTGATGAGATTGTTGTGACTTGTGAGGAAACCCGAGTTGATGTGTTAGAGAACCATTTGC CTTCTCATGGAGCTGATTAGTAGACTAATTTTGAGAAAGTGCATTGCTTCATGGATATGAATGGTCTTTTTGAAAAATGA TGGTGTGAAAGCTAAAAATAATATATTTAACTGTGTTTTAAATTTTTGATCTACTGCTAATACTCAACAGGAGTATTGCT CAGGATGATGATATATTTTAAGTTATAAATTGAATACATAAGTTCAAGAATATCATATGACAACGTCAAGTGAAACATTC AGGTTTATTTTTCTCTTCATAAATACTCAAACATTGTAACTATACAAAAATTCAATATGAGGGAGTTTCCACATGAGAG
CDS sequence (LotjaGi2g1v0415400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCTCTAAAGTTCATGCTGGCAAGGAAATGGCAATGGCTGGGAATGACAATGAGAATGAGAATGAAAATGGCAGAAT CACTTGGAACTGGAAGAAAAGTATGCATGTTTTCTGTGATAGGTTGATGAGATATCCTAGTATGGCATGGCAGACTACAT GGAAGGTAGGAAGTGAAGATCCAAGAAGGGTCATCCATGCATTGAAAGTGGGTTTGTCTCTTGCTCTAGTTTCTCTGTTA TATCTGTTGGAGCCACTCTACAATGGGATTGGACAGAGTGCTATTTGGGCTGTCATGACGGTAGTTGTTGTGCTTGAATT CACCGCAGGGGCAACTTTATGCAAAGGGCTCAACAGAGGATTAGGGACACTTTTAGCAGGATTATTGGCTTTTCTTATTG GGTACATTGGAAAAGCTTCTGGTCGTGTCTTTCAAGCTATCTTCATCGGTGCTGCAGTTTTTCTTATAGGAACTTTGGCT TCTTATATGAGGTTCATTCCGTATATAAAGAAGAACTATGACTATGGTCTAGTTATATTCCTCTTGACTTTCAACCTGAT TACTATATCGAGCTACCGGGTGGAGAATGTGTTGAAGATTGCACATGACCGCGTATACACCATTGCCATAGGATGTGCCA TTTGCCTTCTCATGAGTCTACTGGTATTTCCAAATTGGTCAGGTGAAGACCTCCATAATTCCACCATTTACAAGCTTGAA GGCCTTGCCAAATCAATAGAGGCTTGTGTGAATGAGTACTTCTATGGAGAAATTGAAGCCTCTGGAGATAACAAATCATC AGAGGATCCTATATATAAAGGTTACAAGGCTGTTTTGGATTCAAAATCCACAGATGAAACATTGGCATTGCATGCAAGTT GGGAGCCAAGGCATTCAAGGTACTGTCACAGGTTTCCATGGCAGCAGTATGTAAAAGTTGGAGCTGTTCTTCGTCAATTT GGGTATACTGTGGTAGCCTTGCATGGCTGTTTGAGAACAGAAATTCAGACACCACGATCTGTTAGAGCCTTGTTCAAGGA CCCCTGCATTCGGCTTGCAGCAGAGGTATCCAAAGTACTGATAGAACTTGCCAGCAGCGTAAAGAATCGCCGCCACTGCT CGCCAGAAATACTCTCCGATCATCTTCATGAAGCCCTACAGGACCTCAACACCGCCATAAAATCTCAACCTCGCCTCTTC TTAGGCCCCAAGCACAAACATAACCATGCTTCCAACATGCTCAAAATAGCAGCTGCACAAGTCGGACACGAAAGACATGG AAAAACCTCTGGATTATCAAGCGTTAAAACTGACTCTTCTGCATTGCTAGAATGGAAAACTAAAAGGGGTTCGGCTGAAC GGTTAAAGGAAACAGAACGGAAATCTTTGAGACCTCAACTGAGTAAAATTGCAATCACTAGTCTTGAGTTTTCTGAGGCT CTTCTATTCGCTGCTTTTGCGTCTTTGCTTGTAGAAACTGTGGCGAAACTGGACCTTGTCATAGAGGAGATTGAAGAACT GGGGAGATTAGCGTGCTACAAGGAGTTTATACCCGGTGATGAGATTGTTGTGACTTGTGAGGAAACCCGAGTTGATGTGT TAGAGAACCATTTGCCTTCTCATGGAGCTGATTAG
Protein sequence (LotjaGi2g1v0415400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSKVHAGKEMAMAGNDNENENENGRITWNWKKSMHVFCDRLMRYPSMAWQTTWKVGSEDPRRVIHALKVGLSLALVSLL YLLEPLYNGIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFLIGYIGKASGRVFQAIFIGAAVFLIGTLA SYMRFIPYIKKNYDYGLVIFLLTFNLITISSYRVENVLKIAHDRVYTIAIGCAICLLMSLLVFPNWSGEDLHNSTIYKLE GLAKSIEACVNEYFYGEIEASGDNKSSEDPIYKGYKAVLDSKSTDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQF GYTVVALHGCLRTEIQTPRSVRALFKDPCIRLAAEVSKVLIELASSVKNRRHCSPEILSDHLHEALQDLNTAIKSQPRLF LGPKHKHNHASNMLKIAAAQVGHERHGKTSGLSSVKTDSSALLEWKTKRGSAERLKETERKSLRPQLSKIAITSLEFSEA LLFAAFASLLVETVAKLDLVIEEIEELGRLACYKEFIPGDEIVVTCEETRVDVLENHLPSHGAD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 529 | 529 | 0.0 | – | |
| Phobius | 1 | 63 | 63 | - | – | |
| PANTHER | 1 | 529 | 529 | 0.0 | – | |
| Pfam | 54 | 508 | 455 | 2.0E-171 | ||
| TMHMM | 64 | 83 | 20 | - | – | |
| Phobius | 64 | 83 | 20 | - | – | |
| Phobius | 84 | 94 | 11 | - | – | |
| TMHMM | 93 | 110 | 18 | - | – | |
| Phobius | 95 | 114 | 20 | - | – | |
| Phobius | 115 | 120 | 6 | - | – | |
| TMHMM | 117 | 136 | 20 | - | – | |
| Phobius | 121 | 137 | 17 | - | – | |
| Phobius | 138 | 142 | 5 | - | – | |
| Phobius | 143 | 163 | 21 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 164 | 174 | 11 | - | – | |
| Phobius | 175 | 193 | 19 | - | – | |
| TMHMM | 175 | 194 | 20 | - | – | |
| Phobius | 194 | 204 | 11 | - | – | |
| TMHMM | 204 | 226 | 23 | - | – | |
| Phobius | 205 | 223 | 19 | - | – | |
| Phobius | 224 | 469 | 246 | - | – | |
| Phobius | 470 | 491 | 22 | - | – | |
| Phobius | 492 | 544 | 53 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Malate transport | The directed movement of malate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi2g1v0415400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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