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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0419300 |
| Transcript ID | LotjaGi2g1v0419300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-N-acetylglucosamine transferase subunit ALG14 like; TAIR: AT4G18230.1 UDP-N-acetylglucosamine transferase subunit ALG14-like protein; Swiss-Prot: sp|Q6AY85|ALG14_RAT UDP-N-acetylglucosamine transferase subunit ALG14 homolog; TrEMBL-Plants: tr|C6T8K1|C6T8K1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0419300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91752960..91756404) extracted from Lotus japonicus Gifu genome v1.2.
TTTATATTTTCTCCTCTCTTCAATTCCTATGCTTGCGACCACATTGAAGGACAACAAAAGCAGGGTTTTTCACTTATCCC TACGACCCTACCACAACACCACCTTCACTCTCTTGAAATTCACAGACACTGAATCGTCTCAAAGTTCAAAACTTTCTCTA CATTTTTCAATCCCTTTGCTTCAAAAAATTCACTGCTACAACCACTGATTGATCCGAATCCCAAATTATTAAGTTGAATG TTATTCAACCATATAAAATTTTCATTACCAACATCAAATACTTTTCAAAACAATAAATAAATTCAAAGGTTATCAATATA TCATATTAAATATTTCATTTTCTAAAATAATTTTTAATGTCATAAATAAATACAAAAGCTTATTCATTTTCAATCCTCAT TAGAGGATGTTATAGGAAGCGATGCACTGTGATGATCACCGTTTCTTACCGTAACCGCCACGCTCCGACGGAAACCGCTC GCCGGACTCATCCTCCGATTTCAAATCACACCGGAGGTAACCTTTCCCTCATTTTCGGATCGTTAATTTTTGCGTGTATG AGATTTGAAGAGGTTGATAATGTAATGTTTATTGTGAAATTTTCCATGTAGCTCCTGTAACTGAAAGCTTGAAGCTATGG AAAGTGACAATAGCTGCAGCTTCTCTTGTTTATCTTCAATTGTTGCCATTTCAACTGCAATTTTGGGCATTTTGGCTGTC ACCTTGTTCTTGGTTCGTGTCCTTTATGTCATGTATTGTAGCGGCAAGCCATTGACCCAAAGAGCTTCAAAACCTGTTAC AACCCTTATCGTTTTAGGATCAGGTTTGAGCTTTGCTTTTCCTTCTTTTCCATCTATATCATAACATTTTATTAACAATT CTACAATTTAGTTTTAGGCCCGATTTGGAATAGCTTATTTGAGCTTATTTTATAGCATAATCGATTATGTAAGTGTTTGG AATAACTTATGTAAATAGCTTATGATCTACATATAACTGTTTTTAGCTTATTTTCATAATCTGGTGAGATTCTGATGAGA TTAGCTTATGAATAAGAGCTTACGTTATATTTCAATAAATTTCTTATTAGCTTGTGAATAAGCGCTTTATCGCATAAAGC GCTTTGTCATATGTGCTCAAATAAATTGTTTATCCAAACATACTTTTACTCTTTTGTAGGCGGTCACACTGCTGAGATGC TTAATCTATTGAAAGCATTACAGAGAGAAAGGTTTAGTCCAAGATTCTACGTTGCTGCTGCTACTGATAATATGAGTCTT GAAAAAGCTCAAGAGTTGGAGGTTGATAATTTGCTTGACTTTATAAGTACCTTTTTCTATTTAATTAATTTTGTTTTTTT TTGTGCCCTTTTTTTTTAGTTGGTTGCTTGGTGCATCTTTGTTGTAATATATGGGTTAAATATTAATTGTTTGTTTTAGT GACTTAACAATAGATGTTCCGTGGTTTATGTCTTATATTGGGTTTTGATGATGATAAGGAAATTAAAGATGAGATTCCAT GGAACTCTTTGTTTGGGGGTAAATATTGGCTGAAGTGCAGTGTATTTGGTTGAGAAGAATTAGAGTTAACTCATACTTAA TTATAAATTCAACCTAGTGTATGGTGCCACATTTTCTTCACTGATTTCTGTCATTCTGTCTGATTTGCAGATTGGTACAA GCAAAGTATTCCACAATGGAAAAGAGCTAAAAAAGATAAGCAGAACTCAAAGACGACTACATTTGGTGAGCAATTGCTAG TTTTTTCCTGCTATTTTCATTTTCTGATTCTGTTTCTTATACAGAGAATTAGTTTCGTACAATTAGGGATGTCATACAAG TGGTAACACCCCCTCATAAGGAATAATCTAGAAGCAGGTAAAATTAACAGGAACAAATTCAAATAAACTGCATGAACAAA TTCAAATATAAATGTCCAGCCATTTGGGTCTGTGGCTGGCTCTTTTGTGCCTGGTGAAGTGTAGAACGGATGGCCCGAAT GTGTTGCTACCACAGATCTTGAACTTTTTCCAAATACACACACAACTCTAACATTCTGTTTTCTATTTTCTTCTATTGGT ATAGGTTCAAAATGTGAATTTTTTGCAAGAGTTCAATCTGCTCTGAAATTTACTTCTAAGGGGTGTCAATGAGTTACAAA TTCTAATCAGAAATGGTTTTTTTCTGCAGAATGGAACAAATTTTACTGATAATGTATATTACATGAAGATATCTCGAAGT AGGGAAGTTGGTCAATCATATATAACGTCGGTTTGGACTACTTTAGTTGCAATGGTGCATGCACGGCGGCTGATGATTGA AATTAAACCTCAAGTGGTACTAACTACTAAGTCTCCTTAATTAGTTCTATTATTTATCTATGTTTAGCTTACAATTTGAG TAATTCTTATTGCTACTATCCAGATACTTTGCAATGGACCTGGAACTTGCATTCCCCTATGTGCAATTGCATTTATATTT AAGGTTCATATTCCCATCATTACTCTGTTATTGTTTCCTTAATTTGTTTAGTCCGATCCATTGGACAATTTATGATATTA CTGAAGTGCGTTTAAACGTCTACAATAGGTGCTGGGAATCAGATGGTCATCAGTTTTCTACATTGAGAGTATTGCGAGAG TGAGAAGGCTCTCCTTGAGTGGCCTGCTCCTGTACAAGTTGCGGATCGCTGATCAACTTTTTGTTCAATGGCCCCAGCTG CAACGACAATATCCGCGAGCTACCTATGTTGGTCGACTCATGTAACCGTTGGTTCCTTTGACCTCATTCAAGAGAAATTT GTATTTTGCAGCCCGGAAACCAAACATTTTGCTCAATTATAAGCAACTCATTCTATACTAATATTGGAGGCAACAAGACA TCTTTTGAAGGCAACATTCTACCTGTTCGTGATACTGTTTGGTCTGCATTTTATGGTTGTGCTGATATCATGATAGATAA TATGTCAAGTAACCACAAGCCGTTTGATCACAAAGGCTCTGATACCATGGCAAGTAACCAATTTTCTCAAAAGCTTGGGT AAGGATCATATGAATGATTTTAAATTATTTTTCTAACAAAAAGCCACTATAGAGAGACATGCACAGTACTACAATAGGGA TGCATCATCCCCAACCCAACATATATCTAACTCAAAGAATAGTGTTTGTCCGCCAATACTAACTAACAATTCCGAAACAC AGGTTGAGCTAACACCTACCATTAACAACTTTCCGGTGTAGATTATCCTCCCTATGTAGCTTTCTTGGAATATTTGTAAG ACCCTGATATTTTATAAATATTTTTAATTTTTGTTTTCATTATCATGTTGGTGCATGAAATTATGTGAATTTTAACAGTA ATATTACTATATTAATACTACGAAGGTTTTCTTGATAAAATACTATTATAAAATATATGTGACATGACAAAATATTGTTG ACGTG
CDS sequence (LotjaGi2g1v0419300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGTGACAATAGCTGCAGCTTCTCTTGTTTATCTTCAATTGTTGCCATTTCAACTGCAATTTTGGGCATTTTGGC TGTCACCTTGTTCTTGGTTCGTGTCCTTTATGTCATGTATTGTAGCGGCAAGCCATTGACCCAAAGAGCTTCAAAACCTG TTACAACCCTTATCGTTTTAGGATCAGGCGGTCACACTGCTGAGATGCTTAATCTATTGAAAGCATTACAGAGAGAAAGG TTTAGTCCAAGATTCTACGTTGCTGCTGCTACTGATAATATGAGTCTTGAAAAAGCTCAAGAGTTGGAGATTGGTACAAG CAAAGTATTCCACAATGGAAAAGAGCTAAAAAAGATAAGCAGAACTCAAAGACGACTACATTTGAATGGAACAAATTTTA CTGATAATGTATATTACATGAAGATATCTCGAAGTAGGGAAGTTGGTCAATCATATATAACGTCGGTTTGGACTACTTTA GTTGCAATGGTGCATGCACGGCGGCTGATGATTGAAATTAAACCTCAAGTGATACTTTGCAATGGACCTGGAACTTGCAT TCCCCTATGTGCAATTGCATTTATATTTAAGGTGCTGGGAATCAGATGGTCATCAGTTTTCTACATTGAGAGTATTGCGA GAGTGAGAAGGCTCTCCTTGAGTGGCCTGCTCCTGTACAAGTTGCGGATCGCTGATCAACTTTTTGTTCAATGGCCCCAG CTGCAACGACAATATCCGCGAGCTACCTATGTTGGTCGACTCATGTAA
Protein sequence (LotjaGi2g1v0419300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESDNSCSFSCLSSIVAISTAILGILAVTLFLVRVLYVMYCSGKPLTQRASKPVTTLIVLGSGGHTAEMLNLLKALQRER FSPRFYVAAATDNMSLEKAQELEIGTSKVFHNGKELKKISRTQRRLHLNGTNFTDNVYYMKISRSREVGQSYITSVWTTL VAMVHARRLMIEIKPQVILCNGPGTCIPLCAIAFIFKVLGIRWSSVFYIESIARVRRLSLSGLLLYKLRIADQLFVQWPQ LQRQYPRATYVGRLM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 37 | 26 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| PANTHER | 20 | 255 | 236 | 1.5E-91 | ||
| Phobius | 38 | 255 | 218 | - | – | |
| SUPERFAMILY | 57 | 211 | 155 | 7.85E-5 | – | |
| Pfam | 57 | 254 | 198 | 1.7E-61 | ||
| CDD | 61 | 198 | 138 | 6.1314E-4 | – | |
| TMHMM | 177 | 199 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Dolichol-linked oligosaccharide biosynthetic process | The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P. |
Expression pattern of LotjaGi2g1v0419300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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