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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0422100 |
| Transcript ID | LotjaGi2g1v0422100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | electron transporter, putative (Protein of unknown function, DUF547); TAIR: AT5G47380.1 electron transporter, putative (Protein of unknown function, DUF547); Swiss-Prot: sp|B2USM0|QUEA_HELPS S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TrEMBL-Plants: tr|G7JXC4|G7JXC4_MEDTR Electron transporter, putative; Found in the gene: LotjaGi2g1v0422100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92020008..92025502) extracted from Lotus japonicus Gifu genome v1.2.
ATGCGTAACCTACTGGAGAGAGCAATGGGCCGAGCATCAAGTACTTTATCACCTGGACACAGACACGTTGCTGGTCAGGT AATTTGCATTAGAGTGGTAGTGGTTTAGACATTAACCATTCTTGGGCACCCCCTCCAAACAGTTTAACCTTTCAGGTTAA TTTGCTTCTTGACTGCTATCTTATGCAGCTCTTCGTATGTTTAGTCTTTTAGCAGAAATCTGATTAATAAACTTAGAATA AGACATTCAAAGTCCACAACTATGAATTATTAGGACCAGAGGAGCTAATGCTAATGTAAAGGATTGTAGCTTGATCAAAA GCATAAAGGGACTTCTTGGATTTTAAATTTTGATTGGCATGCATAATACTCAGTGTAACATTTCTCAGGATTGCTCCTAT AAGTATCTGTTATGTGGAAATTACTTATTTCTCCCCCCCCCCCCCCCCCCTTTCAGACAAAAGATTTAATTGCTGAAATT GAGTTACTTGAAGAAGAGGTTACGAGCCGGGAGCAACATGTGCTTGCTATGTACAGGAATATTTTTGAACATTGTGTTAG CCAGCCACCTTCTGAACAGAATTCTAGTGTGACTTCACCTGCTCATACAAGGCATGAATCGAGGAAGCATCCAAGTATAA TTTCAAGTGCTTTCTGTTCATCAAAAAAGTTTCCCTTACGGCCCTTGCAAACACTTATTTCGAATAATGACCTGAAGAAT AGAATCTTTGGGTCAAGTCATGCTCCTTTATCAAGTGGCAATGGCAAAGTTAATTTCGGAAAGAATGGTTCTGATTCCAC CACCAAGGTAGGATATATTGCTATAGCTGTAGTTGCTCGTTTCATTTGCTTTTGCTATGAATGAAAAAAAAGGTTTATAT ATAATATATTAATGTTGTACTAAAGATTGAATTATCCTCACTAACATTCTCATCTCAATCATATGTCAGGTTCGCGAGAA GGTTTCTATGGCAGAGAAAACTCCAGTATTGCAAACTTTAAAAGACCATTTACACCAGTGCCCTAGCAGGCTTTCTGAGG AGATGGTGAAGTGTATGGCAACTGTATATTTCTGGCTCCGTAGTGCAAAATCTGCAAATGCTAAAAACAGCCGGTCACCT TTATTGTCAAGGTCATCCACTAACGCCATACAGCCTCGCCATGGCGTTGTAGAGGAGCGAGACTGTTCTAGCAAATCAGC AGTGGAAATATCTTGGATAGCTACTCGCAAACGTCATTCTTCTCATGCTTCTTATGCCATCGACAACTACAGGTAAGTCT TTTGAATAGGATAATTTCAATTAGACGTTAAACATATGAGTATATGACTGAGTACCAAAGTTCAATTATTTTTTGAGATT TATACATAAAATTTAAAGATAGTGGCCTGCTAAAAATTATTTCTATGTTTGGAAATTTAGAAATTTAACAATTTATAGTT ATTTGGTAATCTTAGAATGAGTTATTTATGATTACCTACTATTATATATATTAATGGCAATCTGTGCAATTCTTTTCTAG ATATTTTCTCTTGTGACTGGCAATTCTTATGTAGACATCTTGAATTAGTTGTTTTAGGTTTCCAAGATTTATAGAACTTA GTTTAAAAAATGACTTATTGAAAATAATATTTATTTGCCCGAAAATATATTTAAAAGCTATTAATCATGATAGGATACTT TGTACCATTTGAGATGATAATGTGGAAAAGTTTGGTGATGTGGTCATAAAACACCAAGGAAAATGATGTTTTCTACTAAT AATAGTGTTACTAAACTCAAATAAGTGGGGTTAACAAGTGGTTGGCAAATTGATGGTGCGTTCAAAGTTGAGAATCAAGT ACATAACATTCTACTGTTTGAAAGGTGAGGGTTGGTAGTGGTATGTGCTGGTGTATCTGATTTAGGAATCTATAATCGAC AGCGATCCAATACAAAAAAGGCAAAAGGCTGGACCTGAGACACACAGCACATCCTTGGCATAGGTTTTGGAAGTCGTGGC CTTCTTAACTGTTTATATGCTCTACTTATCTTCAACTGTTTATATGCTCCACTTATCTTCAAAAAATGATGTAGATTATG AGCCATGCACTTTTCAATTTTGTGAGATTAACATGACAATACAAGGGTGGATTTGACAGAATATCCAAGGATAGTGGATT CTTGATAATGACAACGATAGTCATAGATTTGGGCATATGACCTCCAACGATAATCTTGAAAAGTGCTCGGAATTTACCAA TCGCAGTTTTGGTGAAGCGCACTTTGAAAGACTTGAATATTTTGTAGAAAGAGGTTCGCATGAGAGGGCTGAATTCTTTG GTGGACAAAGATACTATCAGAAGGTGATAAAAGCTATAAAAATCATGTTGATGTGTGTGGAGTGTTCACATCAAGTTCGT AGGTAGGATACCCGGTCCAATAGATTTGAGTTCGAAGATGGGAAGTTCACTTGACTCAAAGTATTGCTTAACTATGGGAA GTTCACTTGACCAGAAGATAGTGAATGTGATGGAGATTTAAAGCTTTAAGTATCCAGCTCTCACTGTCTCACGCCATAAC TGCGTGTGCTGTTGTGAGTATCATTAAGTTCTATAAGTTTGTTGGCCCTATATATCATGTCAAAAATATTAAATATATAT TTTGAACAATGGTGGCCAATCATCAATGAAGACAACATCACACAAAGCAGTGATCTTTGTCTGGTTCTTGAAGAGTCGAC ATTACTTGCGAAGGGCTATTTAAAATCCACTTGCACAAGAAATGAAATGGATTGGAGGGAGTGAAACCCTACACATATAT GTAATTTCCATTGGCAGATCTAGAAACCCAAATCTTATGATTGAATTGTTTTGAATTTTATGGGGATTCTACCGAATAAT TTGGACTCAGTCTTTATCTAGTGAAACCCACCTAAATGTGCTGGAAAAAATGTGGAAAAGTTATCACGATTATAGAGTTG TTTAACTTATTGTAAGTATAAAGGAAAAATAATCTCATTCTAGGTAGATCAAAAAACATTCTTTTTGAAATGTTGACTTA ACGAGTTGTTTTTCTTGTTTTCATTAGGGTTCTAGTTGAACAACTTGAAAGGGTGAATGTCGGTCAAATGGATTGTGATG GGCAAATTGCATTTTGGATCAACGTTCATAACGCTCTGGTGATGCATGTAACATTCCCACTCGTGACTCACCATGATTTT GATTTACCAATTTTCAGCGCAAATAACATTTTTTTGCTGCTCACAGGCATATTTAGCGTATGGAATTCCCCAGGGCGCTC TCAGAAGGCTTGCCTTGTTTCACAAGGTAATTTATTTCTTTACTCGATTGGTATTGTCATTTGGTCAGAAGCAAATTCTC CAAGGTTTTAAATGTTGTGAGAAACTTCTGATGTATAGATTATCTAAACTTGAGTGTTATTGAAATTTTAAGAAATGTTA TCCTTTCATACTAATTTTATAAAATTATGCTTTCCACATAATTCTATATGTATCTATGAGATCGAGTATGGAACTATGTT TACTCACTCACCTGTGATTGAGTATTCGTTTTCCCCTTTTCCTGCATTGGAAATCCGGTATTTTACATTTTACATATCCA TACAATTCAGTCATTGGATTTTCAAAATAGTGTAAAGAGCTCTGCACAAGCCAATCATTGTTTATTGTAATATCCATACC AAGAACGATAACTAAATAACTTCTGACTTTTTTAATCCATTAAATTACTAAGAAATTACTGTATTTAAACGGAGCAACTA GGTGTGTTTGAAAAGCAAGTAGAGTTTCCACATTAAAAGAAAAATTGAAAGTAGCTTTCGCGGGAAGTGAAATGATTTTG GAAGTTTTAATCATGGATAAAAAGACCTGTAAAATCTTCATCAATACCAAAAACACACCTTCTCTTAATTACTTGTTAAA TCATTATATGAATTATCACCAATGGGCATATGATGTGAAATTGTCACGCCATTTGTCGGACATCTGGACACCCTTAAGAT TCCATAAACATGTGATGTCATAGTCGTACTCTTTTAGCACTTCCATGTTTCTTATTGGTATCTTAACAGCTTATTTTTTA ATATTTTTTTATCTGATATCATGCACAATATGAATTAATGGATACTATTGTATAGTGCAGGCTGCTTACAACATTGGCGG ACATATTATAAGTGCAAATGCCATAGAACAAGCGATATTTTGCTTCCGAACACCTCGCATTGGAAGGGTACTCATCCAAA CCTCTTCCTCATATAAAAACAAGGGTACCTATAAACTTATAAGAAATATTGTCTGGTTTATCATGAATCTAATGGTGATC TCTTTGAATAGTTCAGCTAATCAGCTCTAATTATAAATTTTCTGTTTTGGCCTGCTGATGGTTACAAATTGCTAAATTTC CCATTATTTGCATTATCTGTGAGCAATCCTATGTTGCAGTAGAAAGATAGTATATGCTTTTGAATGGCATCATTAAATTG GTACTGCATAGCTAATGATTTAATAGTCACCAATGATCTTGTAAACTTGAATAGTCGAGTGAGAAGACTACCATGCACTT TTTTTGTGAGTGATATGCTTGGACCTTCATTAGGACCTTAATTTTGTTTTCTGATATAACACTGTAATTTCCTTCTTCTT TTTAACCCAATTTGATATAAGAACTTCTAACACTTAGTTTGGTGCTGGAATAGCATCTTATATTTCATCTGATTATTATT TCTGCTCTATAAAACACAGTGGCTTGAAAGCGTTGTGTCTGCTGCCCTAAGGAAGAAAAGTGGTGAAGAAAGACAGCTTT TGAGCTCAAAATTGGGTATTACTGATCCCCTACCACTTGTCTTCTTTGCCCTTTGCACGGGAGCATTGTCAGATCCAGTG GTAATTTCTCTCTCTACTTCTTTGTAGTTTGTGTTACACTGGGTATATCAGATATGTGAATGATAGTGGTGTAGGGCTTT ACTTTTATTGAGTCTATTTAGTTGAATGCTAATGCATTGATGAAGTAAATATGAGAAATTCTAAATTAGAGGGTTTTATA TTCACATTTGCAAGATTTCCTCTTGTAACCAAAAAATATTCACATTTGCACAAATAATACTTCCTTCTCTCTGATACCCT GAATTTAACGAGTTGATGAATAATTTTGTCGGTACAATGCTGCAGCTAAGAGTTTACTCAGCATCACATATAAGAGAAGA GCTGAGTGCTGCCAAGAGAGAGTTTCTACAAGCAAATGTAGTTGTGAAGAAGTCAAGTAAAGTTTTTCTCCCTAAATTGG TGGAAAGATTTTCTAGAGAAGCATCGATCAGCTTAGATGATATCCTAGGATGGGTCATGGATAGTGTCGACAAGAAGCTG CATGATTCAATACAAAAGTGCCTTGATCGTAAATCAAATAAAAAATCTTCTCATATGATAGAATGGCTACCTTACAGTTC TAGATTTAGGTACATGTTCTCGAAGGATCTAATAGACAAACCATGGTGGGTATGA
CDS sequence (LotjaGi2g1v0422100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTAACCTACTGGAGAGAGCAATGGGCCGAGCATCAAGTACTTTATCACCTGGACACAGACACGTTGCTGGTCAGAC AAAAGATTTAATTGCTGAAATTGAGTTACTTGAAGAAGAGGTTACGAGCCGGGAGCAACATGTGCTTGCTATGTACAGGA ATATTTTTGAACATTGTGTTAGCCAGCCACCTTCTGAACAGAATTCTAGTGTGACTTCACCTGCTCATACAAGGCATGAA TCGAGGAAGCATCCAAGTATAATTTCAAGTGCTTTCTGTTCATCAAAAAAGTTTCCCTTACGGCCCTTGCAAACACTTAT TTCGAATAATGACCTGAAGAATAGAATCTTTGGGTCAAGTCATGCTCCTTTATCAAGTGGCAATGGCAAAGTTAATTTCG GAAAGAATGGTTCTGATTCCACCACCAAGGTTCGCGAGAAGGTTTCTATGGCAGAGAAAACTCCAGTATTGCAAACTTTA AAAGACCATTTACACCAGTGCCCTAGCAGGCTTTCTGAGGAGATGGTGAAGTGTATGGCAACTGTATATTTCTGGCTCCG TAGTGCAAAATCTGCAAATGCTAAAAACAGCCGGTCACCTTTATTGTCAAGGTCATCCACTAACGCCATACAGCCTCGCC ATGGCGTTGTAGAGGAGCGAGACTGTTCTAGCAAATCAGCAGTGGAAATATCTTGGATAGCTACTCGCAAACGTCATTCT TCTCATGCTTCTTATGCCATCGACAACTACAGGGTTCTAGTTGAACAACTTGAAAGGGTGAATGTCGGTCAAATGGATTG TGATGGGCAAATTGCATTTTGGATCAACGTTCATAACGCTCTGGTGATGCATGCATATTTAGCGTATGGAATTCCCCAGG GCGCTCTCAGAAGGCTTGCCTTGTTTCACAAGGCTGCTTACAACATTGGCGGACATATTATAAGTGCAAATGCCATAGAA CAAGCGATATTTTGCTTCCGAACACCTCGCATTGGAAGGGTACTCATCCAAACCTCTTCCTCATATAAAAACAAGGGTAC CTATAAACTTATAAGAAATATTGTCTGTGGCTTGAAAGCGTTGTGTCTGCTGCCCTAA
Protein sequence (LotjaGi2g1v0422100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRNLLERAMGRASSTLSPGHRHVAGQTKDLIAEIELLEEEVTSREQHVLAMYRNIFEHCVSQPPSEQNSSVTSPAHTRHE SRKHPSIISSAFCSSKKFPLRPLQTLISNNDLKNRIFGSSHAPLSSGNGKVNFGKNGSDSTTKVREKVSMAEKTPVLQTL KDHLHQCPSRLSEEMVKCMATVYFWLRSAKSANAKNSRSPLLSRSSTNAIQPRHGVVEERDCSSKSAVEISWIATRKRHS SHASYAIDNYRVLVEQLERVNVGQMDCDGQIAFWINVHNALVMHAYLAYGIPQGALRRLALFHKAAYNIGGHIISANAIE QAIFCFRTPRIGRVLIQTSSSYKNKGTYKLIRNIVCGLKALCLLP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 359 | 359 | 5.8E-170 | – | |
| PANTHER | 1 | 359 | 359 | 5.8E-170 | – | |
| Pfam | 1 | 57 | 57 | 8.2E-11 | ||
| MobiDBLite | 62 | 85 | 24 | - | – | |
| Pfam | 264 | 332 | 69 | 1.1E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0422100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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