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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0423800 |
| Transcript ID | LotjaGi2g1v0423800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine triad nucleotide binding protein; TAIR: AT4G16566.3 histidine triad nucleotide-binding 4; Swiss-Prot: sp|Q84VV6|HINT4_ARATH Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4; TrEMBL-Plants: tr|A0A1J7GYG8|A0A1J7GYG8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0423800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92183728..92186381) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTATATTGCTGCGTAGCTAATGGTGGGTGTCTCCGTAAAAACCAAAGCCATTTGAAAGTTGGAGGTTGCATCCCCAA GCCATGGCGGGAGCAATTGGATCGACAGCAGCATCATGTATATTCTGTGATATAGCAACCAAATCCAGCTCCAATACTCT TCTCCACTCTGTTCGTCTCTCTCTTTTCTTTCGTCTTTTGAGTTTTTTTCTTTTCTTTTTTGTTTCGTTTCTTTACTGAT TGAGTTCCGGAATCGGAAAATGCAGGACGATAGGGTTGTTGCGTTTCGGGACATCAATCCATCTGCTTTCAGGTATCACA AATTCACAATTCGCAATTTTAATTGGTGAAATTTCATTGCGGATGCTGTAGAATTCTCGATCAGATTTTATGGGAATTTT AACTTTCTGATTGATAAATTTTAGGCATTACTTGGTAGTTCCTGTTGAGCACATTCCTACTGTTAAAGATCTGCAAAGAA AAACTGAAGACTATTCTCTAGGTAAACAAACTAATAGCTCGAGCTTCTTCTTCTTCAGATTTTAATGTTCAAATTTGCCT GACTCGGTTTGATGATTGCGTACTTTATCCAGTGAGTCACATGTTAGAGGTGGGGAGAGTTTTATTACTCAGAGATGCAC CTCAGTCCAAGATGTACAGGTATTGGGTTTCTTTCAAGCACAATGTTATTTTTTTTATTTTCTCATTTTCAACTTTGTAA TATTAGCTGTTGATTTCAATTGCAATTACAGCCACTATAACTTGCATTGTTGGTTTCATAAATATAATGCTATGAATTGC TTTGCATTTTGATTTGTACTAGCAAAGTCCAAACTGCTCATTTTCTATCATGAATAATTTTTCAATACTAGTTGTGTTGA ATTACTTTCTATTAACTAGAATCGTTTTTCTATTTGTCGAAAATTAGTTGGGATGCTGTGTTCTATGCTGGAATACAATG TTGTCTTTGGTTGTCTCTATATTTTGTTAAGTTTGTGCATAAACATTTTCGGGGTGATTTCTTGAGGTTTGTTGAATATG CTGTCTGGTGATATATTTTCTATTTAACATTCGGTAACTATGGAGAAAAATTGAGTTGAAAAAAATAAAGGGTCATATAG AAATAGGTTGGAGATTGAATGCTCATTTTCAGTAATTTAACTTGCCTTTGTGGATTAATCACATTGGGACTTTTAATTCA TATTTTGGGCTTTGAAAATGCTAGTGAAACATGGATTACTGAAAATTAACAAACTATGTGAACTTCTTGAACAACAGTTG AATACTATGACCAGATAAACAAATTCAAGAGTAGAATACACGAACTACCTCGTTGGTTAAAAGCAGGAGTTGATTTGAAG TATTTTTAAACAAAACATGACCATGTGATTCTTTGTATTACCTTTCTGACAGATTTGGTTTTCATCAGCCTCCATTGAAC TCTGTTAACCACCTACACCTTCATTGTTTGGCACTACCATATACACCCAAGTGAGTATCCATCTTTCTTGTTAGAGTATG CATGCTTAAATTCATCATATATGCTGGGTGGATTCTTAAACTTGTCACTTCATGAGCTTTGGCAGATGGAGATGTATAAA ATACTTGTCTTTTGGACCACTTGGTTTCATTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTGCCCACAATTCATT CAAAAGTATAAGTTTACTTGAAGTTACTGTATAAAGTTTTGCATTTGACTTTTTATCTCTCCTTCTGATGAGCGAAGTTT GTTTTCTCAGTCATTCCCTTGAATCTGTAGGTCATGATCCCTGATATAGTATCTTACTCAAACCTTCATATGGGGAACAG TTAATAATATGCGTTATAATGACTCTGGATAAAACTTTTCTGAAGTAAACTTGTCTATAAAGTTTACAACTATACATGTA AGGCTATCTCTATCATTGTTTTAATTTAAAATATAATGTAATCCACAAGTGGGGTAAGGATTTGTTGTTGAGTAATGATA TATACACACCTCATTTTTAAAACACTTCATTTCCACCTCTTTTTGTTTCTATCTCTCTCCTCTTACCATCTATCACATCT CATACTTTCTCTCCCTTACTTTTTCTTTTCTTCCTATCTCTCTCATCATTCCACCTCACACACCTCAAAAGAGAGGTGTG TGAGTAACATTACTCTTTGTTGTTGTATATTGTAATCCGCAAAAATTCAAGGGTGAATTCACATTTTCTTTCTTGCTTTA CATATAACCTCACTTTCAGGTAACATTTTTTCAATAACACAAGTCCTACTGATGTATATTCACCATAAATGCCGTAGTTG GAACCCAAAATGATGTGGTGATGGCTACCATGTTATGCTAAGCTATCCGGTGACAACATTCTTTCTAAAAGGAACTGGAA AGAGTTGAGAAAAGAAGACGCATTTCAGTGCTGTACTTACCAGTAGTTCTTAGGCATTTCCAGTTAACTTGATGTTAGTT GTCTTGGAGAGTTGGGTATGGAGTTTGTGTGATACAAAATCGCATGCCTAGTACACAGATAAGTGGAATTTGAGAATCGC AATGTTCGGTATATGTAGCAACATTATACTCGGAACATTCATATTTGATAAGTTGAATTGATTTTCAATTTATGTGTTTA TGTTGGTTCCACAA
CDS sequence (LotjaGi2g1v0423800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGAGCAATTGGATCGACAGCAGCATCATGTATATTCTGTGATATAGCAACCAAATCCAGCTCCAATACTCTTCT CCACTCTGACGATAGGGTTGTTGCGTTTCGGGACATCAATCCATCTGCTTTCAGGCATTACTTGGTAGTTCCTGTTGAGC ACATTCCTACTGTTAAAGATCTGCAAAGAAAAACTGAAGACTATTCTCTAGTGAGTCACATGTTAGAGGTGGGGAGAGTT TTATTACTCAGAGATGCACCTCAGTCCAAGATGTACAGATTTGGTTTTCATCAGCCTCCATTGAACTCTGTTAACCACCT ACACCTTCATTGTTTGGCACTACCATATACACCCAAATGGAGATGTATAAAATACTTGTCTTTTGGACCACTTGGTTTCA TTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTGCCCACAATTCATTCAAAAGTATAA
Protein sequence (LotjaGi2g1v0423800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGAIGSTAASCIFCDIATKSSSNTLLHSDDRVVAFRDINPSAFRHYLVVPVEHIPTVKDLQRKTEDYSLVSHMLEVGRV LLLRDAPQSKMYRFGFHQPPLNSVNHLHLHCLALPYTPKWRCIKYLSFGPLGFIEAEKFLEKIKPLPTIHSKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 144 | 138 | 2.6E-58 | – | |
| PANTHER | 7 | 144 | 138 | 2.6E-58 | – | |
| SUPERFAMILY | 9 | 141 | 133 | 2.32E-28 | ||
| Pfam | 11 | 120 | 110 | 1.2E-26 | – | |
| PRINTS | 13 | 29 | 17 | 2.7E-7 | ||
| ProSiteProfiles | 13 | 121 | 109 | 12.547 | ||
| Gene3D | 14 | 152 | 139 | 8.0E-28 | ||
| PRINTS | 34 | 52 | 19 | 2.7E-7 | ||
| PRINTS | 102 | 112 | 11 | 2.7E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi2g1v0423800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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