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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0424100 |
| Transcript ID | LotjaGi2g1v0424100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT5G47510.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|F4JYJ3|SFH11_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH11; TrEMBL-Plants: tr|G7JW23|G7JW23_MEDTR SEC14 cytosolic factor-like protein; Found in the gene: LotjaGi2g1v0424100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92210036..92214152) extracted from Lotus japonicus Gifu genome v1.2.
CGCCTCTTTCCCTTTTCAACCATTTCAGAATCCAAAATTCCTTCCTTCTGCTAAACACTCAAATCACAACCAAAATTTCA CACCATTTCAATATTACAATTTTCAATTTCTGTTCCACACTGTAAATTCTGTTTTTTACAAGTTCCGGAAATGATATGAT GAGCACTTATGATTTTCATGTGAAAGGTATAGGGTTTTAAATGTGGACTTTGAATGATTCTCTAGTTTCTATAATAATTA GTCAGGAAAATTACTTTTGCTGATCGATTTTGTATCAGAAAGCACGTTTTCAGTACAATCGCGTTTCACATATGAGTAGT CCGAAGGTCAGGGTTGAAGAGAGGGACATTGTTATAGCAAGAGGTGATGGTGGAGAAGAAGAGTTATTCAGTGGTGTTGA GAGATTGAAGAAGGTTGATTCTGGAAGTGTGAAGAGGAGGACCAAATCGTTTCATCCTCCAATCGAAACGCATTGGCATC TTCCTTTAGCAGAAGGAAAAAGAGAGGGTTCTAATTTCTCCATCAAGTCACTGTTGTCTTTTTCGCTCATGAAACTCGGG AGGAGTAAAAGCAAGGAAATGGTTCTACAAGGAGCTCATGATCCGAAGCATGAAGAAATTGTTGAGTCTTTTCGCACAAT GCTTTCGCTCGTGGATCTCTTACCACCTAAGCATGACAATTATCATACTCTTCTAAGGTATATGTGCACCAGATAGATAG ATAGACAGATAGATAGTATTTTCTAATTGCATTGCTTTTGATGTATTATAAGGTTTCTGCGCATGAATGATTTTGACATG GAAAAGTCCAAAGATATGTTTCGCAATTATCTGAAATGGCGCAAGGAATTTCGAGTAGACATGCTTCCTAAGGTGAATTA CTTGAACTTCAAGATATATTCATTTGCAAAAATGAAAATTCTGTTTGGCAGAAACTAGGAGCATCATGCATGTTGATTGT GGGTGTGCTTTAGGTTCTTTATTTCTTAAGCATTAGATATGATCAAAGAAAATTTAACATGGTTTTAGAATTAAAATGCA ATTACTAGTTTGCTATAGCCTATAGCAATATGAACTGCATGTCCATTTAAAACGATAAAGTTTAGATTTTAGAAGTTCTC CACCTCTTGTTATTGATGCAATGTTTGGTATTTAATCAGGAATTCCATTTCACGGAGTACACAGAAGTGAAGAAATGCTA TCCTCATGGATACCACGGAGTTGATAGACACGGCAGACCTGTGTATATTGAGAGAATTGGGTTGGTAGATCTTGACAAAC TGGGGCAAGTAACCACACATGAAAGGTTTATCAGGTATCATGTGTCAGAACAAGAGAAAACACTAAGAGTAAGATTCCCT GCATGTTCACTGGAGGCTAAAAGGCACATAGCATCCACTACAAGTATATTGGATGTCAACGGAATAGTGAGAAGATTTTT CTATATAAGTTTCCTTTTTATCAGAATTTGCTCGAAGTTTTGTGGTTCAATTGGTTCAGAGTTCTTTAGATGGGGGGCAG GGGCTTGGGGATCACAAATTCTTACATGTACCAAGAGGAAAATGTTTTCTTTTTTCTATTTTTTAAATGCATTTTAAGCA AATAATATTAAAACTGAAAACTTGTTAAGGTTTATCAAGTTCTAGTCACTTCATTTTATTGAGGTCCATATCTAGATGAT TTTCCACATGCTGATATACGATTATGTGGTTGTATTCTTCTAGGGAATGTCTAATTTCTCAAAGCCTGCAAGGTATCTCT TTATGGAAATTCAGAAGATTGATAGCAGTTACTATCCTGAGGTATTTTTTTACACTGTAGTCCATACACAGATGATTTGG ATATTTAATGTTTGTGATAAACGTGTGAACAAGGAGGTTAGACTATCTGAAGATAAGATAATGATTGCTTTTCAATTTTA TAACAATCATTCAAATGAAAAAACAGTTCTAATTCAAAATATCTGGCACACATATGATGTAATTGTCATTTCTTGAGGAA AGGAAGAGAGAGCATAGAAAAAAAAATTGGGAACAAAAGGTCACAAACCTGAGCTGCACTTACATTTAGTCCAATTCTGT AACAAATATGTCAAGTCACCAACTAATCCTTAAATTCCTATCTCTAGATGTTTCCTAGACATGTTTTTTATCTCCCTCCT TGAGATACTGATATTCTTTTCTGTAGCATGGTCGAACTTATTGATTATACATGGTAAGAAAACATGCCAGAATTTGCATT TAAAACTTCAACTGTGCGAGATAGACACATTTTTGCTGTTAGATGTTTGGTTTATGAGCATTACTGTGCAGTTAATTAGT ATTCATTTTCATTCTTCCAGACTCTAAATAAGCTCTTTATTATTAATGCTGGATCGGGGTTTAAGATGCTGTGGAAAGCA GTGAAGACATTTCTAGATGCACGCACAGCAGCAAAAATTCAAGTATGGGACATTGAAATTCAATATCATTTTCATTCTCA GATAATACAATGAGGTAGCACAACTATATTTGGTTGTATCACTCCCAAGCCCATATTTATGTTGAACTGTAACATTGTTG TTTCAGGTGTTGGGTTCTGATTATCTCGGTGTGCTGCTTCAGGCTGTCGATCCAAGGTGACGACTTCTAAAAATTTAGAC ATGACTCTTTTACAGTACTAAAAACCTGAAACCTGATTGATGAATGTGTTTGTGACTTGTGAAGTTCTGCACTTAAAGAA TCTCCTATATTTGATTGTTTGATTTTACAGCAATTTGCCTACTTTTCTTGGTGGTGACTGCACATGTTCTGAATATGGAG GTTGCCTTATGAGCGATCGAGGGCCCTGGAAAAATCAAGAATTTTTAGAAATGATTCAGGTTTGGCAGTACTGTGAAATA ACACTTCCAATTGTCATTTTGTCAAGTGAAGTCTCTACCCGCCAAGCGGTTACTTAGCTTTAGTTACAATTAGTGAGGAA GTTAGAAGTTTGTTATTGTAATTAGCTGGTTAGTTAGTTTGCCTCCTAATTCTGTTATTGCTCTCATTATGTATATATTG TACAGTTACCATTCAATCAATAAGAATCAGATTACAATCTACATGTCATCATCTCATTTCTACCATACATGTAGAAATTG TTGACAGTGGTTTCTCATTGTTTATGCAGGCAGTTTCATCGGGCAAAGAGACCAATGGTCAAAATGAACACGGTGATGAG GCTTCAGAAGATTCCTTGATGCCAAAAAATGTGAGAAATTGTTCACCTTTACTGAAACATCTACCAATATGTGACTTAAT GATTCGCATAATAAAATGCAGGTTGACATGCAAAATGAAAATGACTTTAGTAAGAGCCTGGCACTAGAGGAGAGAGCTCG TGCGATGACAGACTCATCATGTAGGTTAGCATTGCAAAAGATTGATCAGCTTGAAGCTGCTCTTAGAGACACAAAAAATG TGAGTTTTCATACGATGATTCCTGAATGTCAAACCAAGACAATCCGGCATGCTTAGTGTTTTTGCTGACACTTATAATTA TAGCAGAAAATCAAGACACTTGAAGATGCACTTCAGGAGACCAAGATGGTGAGCTCAACAACCTTGATATATCTCTCCTC TAGCAAAGTTAGATGACAGTTTGTTTTTCCTTTCCTTCTTTTTCAGGCCTTGAAAGAACTTGCACAGCTTAAAGAACAGC CAAAAATGTGAAATTGGCTAGTGTTTCACTCATAGTCTCTAACTCTTACTAGTTGTAATGTCAAATAGCATGCTCATCAT AAAGTAGAGTCCTCCCCTTACCCGACAATACAAACATTAAAATACCGCAAAGTAGATTATCCACTCACAACTATTGAAAA TTTACTAAATCTCTCCTGTTTTCTAGCAAATTTAAGCATCAACGATGGGTAATGAAAATGTTGACAAATTCCTTCAATTT ATAAGACTTAACAGTATGTTTGGGCGGATCATTTATAGAAAGAAGGTAATGTAATTTTTGGAGGAATTTTATATCCTTTG TATTAAAATTCTGTGTTTGAATTTAACATACTGCATTCTAAATTCCTTCAAAAATTACATTAGCCTCTATAAATGCTTCA TCTGAACACACTCTTGGTTTTGATAGTCATAAACCCC
CDS sequence (LotjaGi2g1v0424100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAGTCCGAAGGTCAGGGTTGAAGAGAGGGACATTGTTATAGCAAGAGGTGATGGTGGAGAAGAAGAGTTATTCAG TGGTGTTGAGAGATTGAAGAAGGTTGATTCTGGAAGTGTGAAGAGGAGGACCAAATCGTTTCATCCTCCAATCGAAACGC ATTGGCATCTTCCTTTAGCAGAAGGAAAAAGAGAGGGTTCTAATTTCTCCATCAAGTCACTGTTGTCTTTTTCGCTCATG AAACTCGGGAGGAGTAAAAGCAAGGAAATGGTTCTACAAGGAGCTCATGATCCGAAGCATGAAGAAATTGTTGAGTCTTT TCGCACAATGCTTTCGCTCGTGGATCTCTTACCACCTAAGCATGACAATTATCATACTCTTCTAAGGTTTCTGCGCATGA ATGATTTTGACATGGAAAAGTCCAAAGATATGTTTCGCAATTATCTGAAATGGCGCAAGGAATTTCGAGTAGACATGCTT CCTAAGGAATTCCATTTCACGGAGTACACAGAAGTGAAGAAATGCTATCCTCATGGATACCACGGAGTTGATAGACACGG CAGACCTGTGTATATTGAGAGAATTGGGTTGGTAGATCTTGACAAACTGGGGCAAGTAACCACACATGAAAGGTTTATCA GGTATCATGTGTCAGAACAAGAGAAAACACTAAGAGTAAGATTCCCTGCATGTTCACTGGAGGCTAAAAGGCACATAGCA TCCACTACAAGTATATTGGATGTCAACGGAATAGGAATGTCTAATTTCTCAAAGCCTGCAAGGTATCTCTTTATGGAAAT TCAGAAGATTGATAGCAGTTACTATCCTGAGACTCTAAATAAGCTCTTTATTATTAATGCTGGATCGGGGTTTAAGATGC TGTGGAAAGCAGTGAAGACATTTCTAGATGCACGCACAGCAGCAAAAATTCAAGTGTTGGGTTCTGATTATCTCGGTGTG CTGCTTCAGGCTGTCGATCCAAGCAATTTGCCTACTTTTCTTGGTGGTGACTGCACATGTTCTGAATATGGAGGTTGCCT TATGAGCGATCGAGGGCCCTGGAAAAATCAAGAATTTTTAGAAATGATTCAGGCAGTTTCATCGGGCAAAGAGACCAATG GTCAAAATGAACACGGTGATGAGGCTTCAGAAGATTCCTTGATGCCAAAAAATGTTGACATGCAAAATGAAAATGACTTT AGTAAGAGCCTGGCACTAGAGGAGAGAGCTCGTGCGATGACAGACTCATCATGTAGGTTAGCATTGCAAAAGATTGATCA GCTTGAAGCTGCTCTTAGAGACACAAAAAATAAAATCAAGACACTTGAAGATGCACTTCAGGAGACCAAGATGGCCTTGA AAGAACTTGCACAGCTTAAAGAACAGCCAAAAATGTGA
Protein sequence (LotjaGi2g1v0424100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSPKVRVEERDIVIARGDGGEEELFSGVERLKKVDSGSVKRRTKSFHPPIETHWHLPLAEGKREGSNFSIKSLLSFSLM KLGRSKSKEMVLQGAHDPKHEEIVESFRTMLSLVDLLPPKHDNYHTLLRFLRMNDFDMEKSKDMFRNYLKWRKEFRVDML PKEFHFTEYTEVKKCYPHGYHGVDRHGRPVYIERIGLVDLDKLGQVTTHERFIRYHVSEQEKTLRVRFPACSLEAKRHIA STTSILDVNGIGMSNFSKPARYLFMEIQKIDSSYYPETLNKLFIINAGSGFKMLWKAVKTFLDARTAAKIQVLGSDYLGV LLQAVDPSNLPTFLGGDCTCSEYGGCLMSDRGPWKNQEFLEMIQAVSSGKETNGQNEHGDEASEDSLMPKNVDMQNENDF SKSLALEERARAMTDSSCRLALQKIDQLEAALRDTKNKIKTLEDALQETKMALKELAQLKEQPKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 78 | 457 | 380 | 5.8E-136 | – | |
| Gene3D | 83 | 155 | 73 | 1.1E-14 | – | |
| SUPERFAMILY | 94 | 161 | 68 | 5.49E-17 | ||
| SMART | 123 | 148 | 26 | 3.6E-6 | ||
| PRINTS | 126 | 148 | 23 | 1.1E-5 | – | |
| Gene3D | 156 | 367 | 212 | 1.1E-71 | ||
| SUPERFAMILY | 168 | 362 | 195 | 1.02E-56 | ||
| SMART | 168 | 339 | 172 | 3.6E-48 | ||
| ProSiteProfiles | 168 | 342 | 175 | 24.682 | ||
| CDD | 169 | 336 | 168 | 1.07937E-38 | ||
| Pfam | 172 | 337 | 166 | 5.9E-33 | ||
| PRINTS | 295 | 314 | 20 | 1.1E-5 | – | |
| PRINTS | 328 | 337 | 10 | 1.1E-5 | – | |
| MobiDBLite | 368 | 387 | 20 | - | – | |
| Coils | 418 | 462 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0424100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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