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LotjaGi2g1v0426000.1

Overview

Field Value
Gene ID LotjaGi2g1v0426000
Transcript ID LotjaGi2g1v0426000.1
Lotus japonicus genome version Gifu v1.2
Description NAC domain protein,; TAIR: AT1G12260.1 NAC 007; Swiss-Prot: sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7; TrEMBL-Plants: tr|A0A061GBJ7|A0A061GBJ7_THECC NAC domain protein,; Found in the gene: LotjaGi2g1v0426000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:92363385..92369048) extracted from Lotus japonicus Gifu genome v1.2.

CTCCAACTCAATAGTAGATAATTACCTAGGAGAGAGAGAGAGAAACTTACTTTTGCAAGGGAGAGAGAGAGAGGGAGAGT GATGATTTTTGTCATTGTTCTTCTTTCTTGTTACGCTTTAGCTTCCTATTTAACCCTACCTCATCTCCATTTTCCCTTTC CTCTGAACCTTGCTTTAATTTTTTTCCTCTTCCTTCACTTTCTCCACTCCTCTTTTTCACCAATCCTCGGGATTTCATCT GAACTCTCTCTTTTTGTAGACAGCAACTATTTCTGAGTGATTCAGTTCAATTCCCGAGGATCCCTAGCTAGCTATTATTT GCTCTTCCTTTCCACTTTCTAATTTTCTTGTCCCCATTAGTCTGGTGCTCGTGTTTCTTTGCTTGTCTTTTAGCTGTTCT TTTTTCCTTTCCTCTTTTTGGTTGGATTGGACTATATTCTTGTAAAGGTTGTTGATCAAAGGATTCTTTTGATCTAGCAT ATATACACACATATATATCTCGTGATTTGTGCAGCAAAAGAGGTTGGTTTCATCAGATCTAACATATACTTGAATTGTTC TTTCTTTCACTGTCAGCTCATTCATTGTTATTAGTTTTCAATTTCTCTTTATTGATTTATCGTGTCACATATATATGGGA TTTGATTTGGCTTCATAGTTCATCTATTTTAGTATGATATTAATTATTAGTGTCTATAAATTATATTATGGCATGAAATT TTGCTTGATTAATTTCATATAATTCAAGTCAACTAGCATAAGTCCAAAAAAAAGGACAGCTAAAAGACAGAAACCATATA TAGTCAAATGCTAAATCTCAGCTAATATGAGATCTTTGACCTGACTAGTTTCCCTTGTGTGCTTCAATTCATATCCCATC AACATACACCTACCGCTAATTCAGGCTTCACTTTTCTCCGTGTTCTTACTTTTGGTTTCACACCAGACAATATTAACTAT TTGCATACCTGACATGAAAAGATTATTGTTTTTTCTGCATGCTAGTGATGATATCTAGCTTCCCCCAAATTGCTTGATTG TTGGAATAATCAGCTTCTAGTTTCTAAGTTATTTTCCCTATACTCAGTATTAATGCTCTATCAACTTTTTGTGTAAATTG GAAAGACTGAGTGTTAATTTTATGCTCTTACAAATTCATCCAACTTCTTCATGCCTATGCATGCATCATTACATATTACA GAGGTGTGACTTGACTGCCTTATGATCTATATATGTGTGTGTTACCACTAACCCCTGAGGTGAGTTTATGTTTAATTATT CCATGAAAAGAAAGTTAATGTTTCCCATATTAAGTTGTAAATTGTGATATTCCATCTCCATATTAAGTTGTGAGTTATAC GGTGAATCACGTTAAAAATTGGTTAACGTATGAATCATAATTTTACAATTAACATTTAACATGTGCTATTAATTAATAGA TATATAGACTATTTTAACTTGTGAACCTTATTTTTCTTAGTTCAGAGACAGAGTCTTAAGTTCTAATTTTTTTTTTTATA ATACTTAATTATTTATTAATAGGTGGATTTTTTTCACCAGTTTAAAATTTCTTCCTGATATTCCATTCTTTTTCTTATCA AGATGGATGTATTAGTTCATCTTTCAATAAATGAACTCAAAAATTATAGGATATATATATATATATATATATAGAACTTA TTAAATATTTTAATGGTAAACTATAATAAATTTAATTAAAGTTTGTTATAGTTAAAAGTTTATAATTATATTTCCATTTT TTAGTTGTTTATGAAGTGCCCTTTACATTGCCTTTTTCTGTTAATTCTCTGAATAAATGCAAAATTAAGAATCAATTGCT ATTGATCAATGATTTCTGCACTTTCAAAAAAAAAAAAGATTTCTGACTGTGTTTAGGGTCTATTTGGTTTCTAAAATATT GTAACTTTTACTTTCTAATTTTCAATTTATTAAAAAAAAACTCATATTTTTTTTTGGTATAAGAAACCATGTATAGTAAA TAGTTAATAACTTTTCAGAGATGTTTTTCTAGTCAATTTTTTTCCTAGTGATTGGTGGGTGTTTTGTGTTCTGATTTTGT ATTTTAATTTGTACTGTTATATATGTTTATTGGGTGAAGTGTTTTTTGGAGGTGTTTTATATTAGCTTAATTAGGTTCAT ATATAATTTACCATCCTTGAGAATGTATGATTTTTCAAGGATTTTGTTATTATGAATAATTTTAGTTTTTGAAAAAGAAA AATACATTTCTCTTTTTTCGACCCTTATACAATAACTTAAGCTTTTTGGATAATTGATTGTTTGGCAACCAAACATTACT CATGTTATGTCATAGTGATATTGATTTTGGATGATTTTGTGTTCCTATTGTTGGTCTTGTACTCCACGAAATATTATTTA TTCTGGAGTGGCAGTGAATCACTGAATCTTATAATTCAATTAAGGTGTAGCCAGCACTCATCATACATATTTTTCAAGTG CAGGTTTGAATCCAAGATCGGATATGAACACCTTTTCACATGTTCCTCCGGGCTTTCGCTTCCATCCCACTGATGAAGAA CTAGTTGATCACTACCTCAGGAAAAAAGTAGCTTCTAAGAGGATCGAACTAGATGTTATAAAAGATGTTGATCTTTATAA AATTGAGCCATGGGATCTTCAAGGTATCCAATTAACTCTCCAATTAGATTAATAAATTAATACACATTAAAACATCATAC TGCTACTCACATTTGTTTGTGTGTTGACAGAATTATGCAAGCTAGGAACTGATGAACAAAATGAATGGTATTTCTTCAGT CATAAAGATAAGAAGTATCCAACTGGCACTCGCACCAACAGAGCTACAAAGGCAGGATTCTGGAAAGCTACTGGAAGGGA CAAATCAATTTACACAAAACATTGTCTGGTTGGCATGAGAAAAACTCTGGTGTTTTACAAAGGAAGAGCCCCCAATGGAC AGAAATCTGACTGGATCATGCATGAATACCGCCTAGAAACCAACGAAAATGGGAGTACTCCTCAGGTAATTGCAGAGAAA TATTAATTTGTGAACTAAATTTTTCTTGATCCACAGTACACAAAATCATATGCAGCCTGGCAATTATAATTTCTTTCATT GTTTGCCAGGAAGAAGGCTGGGCTGTATGCAAAGTTTTCAAGAAAAGAATGCCAACAACAATACGGAAAATGGGTGACTA CGGGTCACCCTGTTGGTATGATGACCAAGTCTCATTCATGCAAGAGCTTGAATCTCCAAACCAAGTTTCTTCTCACCATT ATGCTTCATACCAGCAGCAGCAGCACTACCCCTGCAAGCAGGAGTTGGAGATGCAATACAATGTAACCAGGACCCATGAC GCTTTCCTCCAACTCCCGCAGCTCGAAAGCCCCAAACTTCTTCAATCTTATGGCTATGATCATGGCAATAATAACAATGG AAGTATTTTGCAGTCCTCATCATCATCACTCCCTCAACAAGAAGAACACATACAGCATGGCCAGCATCAAAGTCTCCAAC ACTTGCTTTATGGTAGCAATAATGATCAAGTGACAGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCAC GAACAACATGCTTCCAAGGATGAAACCAGTTATTCCAATGTGGCTGAAGATCAAGAGCAATTTACTTTGCTACCAAATGG ATCTGAGAAACCTGAAATTAACCAGAAATATGCTTCAACGACAACCTCTAGTTGCCAAATTGACCCGTGGAAGTGATCGA AGCTTTATAACTAGAAGATGCATCCTAACTATAAGGAGTAGTAGAAAGACAAAAAAAAAACCGTATTGGTCTAAGTTTCT GTACATAATAAACCCTAAAGCATTAAATATCTTTAATGTTTGAACCTCTGGTGCGAGAGTATTCACCTAACATATACTTC GCAAGGCATAAGATGCAACATATATATGAATCACTATATTGTAGCAAAATAGTTATTACTTTAAGGTGAATTGTCTGCCT GATTTGCAAGAATAATAAGCTGTGTGAATATTAGTTATTTCATGTATTGCTACTTATTTAAGTTCATTACAAGTTACATA TACACACATGCACTTAGTGATTTCATGTATTGCAACTTATTGCACACTTCCTCTCTCTTTTTTCGAAAAGTGTATTAGTA AGGCTTGAGAATCTAAGGTAAAATACTAAATGTTACGATAAGAAACTGAAGAAATTGAAGCTATCAGCCACTAATTAACC CCATTAATTTCTTTCAAACAACTGCAGCTACCTTCATCACATCAACATTATTTCCAACTTCCCTTCATAACATATAACAT TGATGATCCATCTCTAGAGAAGAATTGATTCTAGAATAAATCGCTGGCAATATGAATAAATAAATTATTTCAAGATTAAA AGTAAATCCAAATATAGCCAACCTAAGAATCTCTCTTCTATATATGGAGTTATTTGCATAATGTTCAACCTTATCGAATC GCAACATACAATCTAGATTCTAGATAATGGTTGTTTTTTATTGCTGCTAAATGCAAAGTAGAAAACTGACACATTTTTAA CGGTGTTAGACCACCACAAAATTTGTGTCAAAAAACACATGAATTCCGTGGCAATTTAACATTGCTAGAAATGTGTGTTT TTTCAAACTTCGTTTTAGCAGCTGTTTTCCAACTATCCAAAACCGCCACTAAACACATATAGATTGTATGTCACAATGAG GTCTACTTATATATTCTACCGTTTTCAAAAATGTGTTGTCCTAGATGAATTTGTCTTGGCATTGGGTTTAATATTGTGTT TTCAATACAATGAATATATTTGTGGTAAAAATTAAGCAGAAGTTAAAAATAAAGGTGTTGAAACTAAAAAATAAATCTTT GGGATGAAGAGAAAACAATAATTAATAAATGGAAATATGTTAAAAGTTCCAATTGTTTTAAAAAAATTGGACTACATTAC ACTAGCTCACAACAAAAGGCCAAACACTCTCTTTCAGCACTATTTTAGGACGTCTTGCTTCCCATCCAACCAAGGGATTA GTGAAGAAGTTCTAACTCTAAATATGAAGCCACCCACAAATCAAAGGACATTCAAATAGTGCATCAGTTGTGCATGTAAC TACTAATAGCATATTTTTATGAGTTTTTCTTTATTCAGAATCAATTTTCACATTAAAAAGCTAGTATCAACTCACAAAAA GCTTCTTCCCGAAATGGAGATTTTCACTTTAGAATCACTTACAAAATCTTCATGTGCAGCTGGAAACTTTAAATATAAGG CATAGTTTTCAAAATCTGTCACACAAGGATACTAAAATCTTTTGAATGTTGTAACCTGTAAAGAGTATCAAGCATCACAA ACGTTGTTTCATAACCCAAAATAAATCGACAATTAAGAGACTTTTCCACTCCATTCTTAGAACGCATACCTTGTGCATGT GAGGATGCACGACTTCTCCTCCTGCAGAAATATTCCTCTATTCAGCACAGGCATCTTCTTGTGGTTAATTCAGAAGTTGC CGACCATAGCTAACTCAGTCACACTGTCACAGGCGAAGAGTGTTTCCCAAAATTGATGATTTATATACAAAGCAAATCTG AATTCTGAAGTGCCTAGCTAATCAAGCATGCTGCTATTCAAGGCAACAAGTTATTTCATTGTGC
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0426000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACACCTTTTCACATGTTCCTCCGGGCTTTCGCTTCCATCCCACTGATGAAGAACTAGTTGATCACTACCTCAGGAA AAAAGTAGCTTCTAAGAGGATCGAACTAGATGTTATAAAAGATGTTGATCTTTATAAAATTGAGCCATGGGATCTTCAAG AATTATGCAAGCTAGGAACTGATGAACAAAATGAATGGTATTTCTTCAGTCATAAAGATAAGAAGTATCCAACTGGCACT CGCACCAACAGAGCTACAAAGGCAGGATTCTGGAAAGCTACTGGAAGGGACAAATCAATTTACACAAAACATTGTCTGGT TGGCATGAGAAAAACTCTGGTGTTTTACAAAGGAAGAGCCCCCAATGGACAGAAATCTGACTGGATCATGCATGAATACC GCCTAGAAACCAACGAAAATGGGAGTACTCCTCAGGAAGAAGGCTGGGCTGTATGCAAAGTTTTCAAGAAAAGAATGCCA ACAACAATACGGAAAATGGGTGACTACGGGTCACCCTGTTGGTATGATGACCAAGTCTCATTCATGCAAGAGCTTGAATC TCCAAACCAAGTTTCTTCTCACCATTATGCTTCATACCAGCAGCAGCAGCACTACCCCTGCAAGCAGGAGTTGGAGATGC AATACAATGTAACCAGGACCCATGACGCTTTCCTCCAACTCCCGCAGCTCGAAAGCCCCAAACTTCTTCAATCTTATGGC TATGATCATGGCAATAATAACAATGGAAGTATTTTGCAGTCCTCATCATCATCACTCCCTCAACAAGAAGAACACATACA GCATGGCCAGCATCAAAGTCTCCAACACTTGCTTTATGGTAGCAATAATGATCAAGTGACAGATTGGCGAGTACTTGACA AATTTGTTGCTTCTCAGCTCAGTCACGAACAACATGCTTCCAAGGATGAAACCAGTTATTCCAATGTGGCTGAAGATCAA GAGCAATTTACTTTGCTACCAAATGGATCTGAGAAACCTGAAATTAACCAGAAATATGCTTCAACGACAACCTCTAGTTG CCAAATTGACCCGTGGAAGTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0426000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNTFSHVPPGFRFHPTDEELVDHYLRKKVASKRIELDVIKDVDLYKIEPWDLQELCKLGTDEQNEWYFFSHKDKKYPTGT RTNRATKAGFWKATGRDKSIYTKHCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGSTPQEEGWAVCKVFKKRMP TTIRKMGDYGSPCWYDDQVSFMQELESPNQVSSHHYASYQQQQHYPCKQELEMQYNVTRTHDAFLQLPQLESPKLLQSYG YDHGNNNNGSILQSSSSSLPQQEEHIQHGQHQSLQHLLYGSNNDQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAEDQ EQFTLLPNGSEKPEINQKYASTTTSSCQIDPWK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31989
4 322 319 1.7E-153 –
PANTHER
PTHR31989:SF200
4 322 319 1.7E-153 –
SUPERFAMILY
SSF101941
5 157 153 6.41E-61
IPR036093
ProSiteProfiles
PS51005
7 157 151 59.567
IPR003441
Pfam
PF02365
8 135 128 6.9E-38
IPR003441
Gene3D
G3DSA:3.30.310.150
16 161 146 6.7E-59
IPR036093
MobiDBLite
mobidb-lite
238 272 35 - –
MobiDBLite
mobidb-lite
239 272 34 - –
MobiDBLite
mobidb-lite
303 353 51 - –
MobiDBLite
mobidb-lite
316 353 38 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0426000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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