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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0427800 |
| Transcript ID | LotjaGi2g1v0427800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G12420.1 ACT domain repeat 8; Swiss-Prot: sp|Q9LNA5|ACR8_ARATH ACT domain-containing protein ACR8; TrEMBL-Plants: tr|G7KG51|G7KG51_MEDTR Translation factor EF-1 alpha-like protein; Found in the gene: LotjaGi2g1v0427800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92499379..92504838) extracted from Lotus japonicus Gifu genome v1.2.
AGGGGTTATTCATTATGGTGATAACTGATAAGCAAGAAAAAAAAAACAAAGATGAGTATCAATGAAAGAAACAAGGAGAA GTACAAGAAAAACGGCTAAAACGGTGAGTGAGTGAGTGAGAGACATAGGAAAAGCCGATACGAGCGGCGTTGTCCATAAT TTGGGTCGGCAACAAATCTCACCTTAATTACGAAGTTTACTCAATGAGAACCACTACCAGGGGTGAGATGGCCCCACCAA CCTGCCACCTGGGTGGACACGTCTGTTCACTCATCTCATATGCTCCCAGCTGTTAAGTACATAGCAAGCAAAGCAACAGC TGCAGATCTCACGTGTCGTCTGAGGTGGATTGTTTACCACGCCAAATCGGTGCACCAATGGACACGTGTTGATTGATCTG TCTGCCAAGTGCCAAGATTGAGGGGCAAAAAAGATATCATAATGAGAAGACTAGCTACAATACTAATATTAATCGGGGTG TGGTGTGAAAGAGGATAGGATGTTGGGTAGGTCAGCGCGGCAGGCTTTAGTCATGCCATGTGACAATGCTCCATGAAAAC ATTAATCCTGCTTTTCCCTCTTTTTCTCTTTGCGTAGAGGCATGGTCTCACATTATTTAAATTTCAAAAATAAAATACTA TAAAAAACCACAAGGACAAAATATCTTTTTTTAATTTGGCAAATTGCTAAATATATATATTTGACGCGCTTCATTCAACT TGGAAACCACAAAGAGGCAAGAGTTCAGAACAAGGCGTGCTCTGTGAGAGAGAGTCTATGACTGTTACACGCTCAGAAAC GCATAGCGAAGGTGAAAGAGTTTGAAGTTCGTTATGGCGATTTGATCAAGAGTTTGCGCAATTCAAAAGCCACGCCCCGT TTTGGATCATAACACACTCTGATTTGTTTTTCTGGTTATCATCACAACTCACAAGGACGTGCTAGCTGTGTTTTTTGGTA GCTGAGACGCGGTTTTGGCTTCGGAAAACTCGCCGACGTCGTTTTTGGACACTCTTATTAAAACCCTCTTCCCTGTAGAG AGAAGCTATCTCTACTTTCACACGATCTCTCATTTTCCTGCAAAAGCAAAGCGATGGAGATCATGGACTGGCCTGCTTGT ACGGATGAATACGAAAAGCTTTTGATACGGATGAGCACCCCAAGGTTTGTCTTCCTCACTTGTTTCTTCATTTCTTGCCA TTATTTCCTTTTCCTTTTCCCTGCTCTGTTCCCCTTTAGTTGGCTGATTTGGTTCAAGTCTAACCCAATTTAGTGGATCA TTGTTGTTTTTACATGATCTTCCTCTGCCCTAATTTGAAACCATTTGCTAAAATGTTATAGTTAATTTTCTTCCAGAGAA AGTCCTTTTTGTTAGACAAAAATATTTCTGCTGATAGCAACTACCACCGACTAAAACTCGTTCATGCATTTGGTTGTAAT AATTCAGTTTTCTAATCTCTTTAAACAGCATTAGATTAGAACGTGACGAGTTTTAGAAAACACTAATTTTTCTTTATAAA ATTTGAATGTGATTTGTCCACTGCCATTATTTTAACAATTTTTTGACTTTTCTTTTTCTTATCACGACTAGCTCCTGTGC TTCCAGAACCTACTCCATGTTCCCATTTTGCGTGTTTCAATCCGACATTTCAAACGTGAATTGGGGAAAAGTAATCTCAC TGACTTTGACTTTTACAGGGTTGTCATTGACAATGCTGTTTGCTCCACAGCGACAGTGGTCAAGGTTGATAGTGCTAGAA GACATGGTATTCTATTAGATGCTGTACAAATTCTCACTGATCTCAATCTTTCAATTAAGAAGGCCTATATTTCCTCTGAT GGCAAATGGTTCATGGATGGTAAGCTAATCTTCATTTTCCCTTTTCACCAATCAACTTCATTCCCAGTGAAATGAGTAAC AATTCCTTAAACACTAACCTTTGCCTATTCAATGGACAGTTTTTCATGTCACTGATCAAAACGGAAACATGCTAACTGAT GAGAGCGTTTTAAAATACATTGAACAGGTATTCCATTGCTTCTTCACAGTTATAAATTATTTATTTTCCCTGTGGTTACA ATTAATTACGAGTTCTGATTCTTAGTTTTCGGTTTTATGTTATAACAGTCACTTGGGACCATTCATTATGCGAGAACCAA TTGCTCAAATGGTCTCACTGCCCTGGAATTAACTGGAACGGATAGAGTTGGTCTTCTATCTGAGGTTTTTGCTGTGCTGG CTGATCTTCAATGTGATGTTGTTGAGGCTAAGGTTTGGACGCACAATGGCCGCATTGCCTCTTTAATCTATGTAAAGGAC TGTGATTCTGGTTCCACTATTGAGGATTCCCAGAGAATTAACAACATTGAAGTGCGTTTAAGAAGTGTTTTGAAGGGAGA CAATGACATTAGAAGTGCAAAAACTTCTGTCTCTTTGTCTGTCATGCACACGGAAAGAAGGCTTCACCAGATGATGTTCG CAGACCGTGATTACGAGAGGACCCCCATTCTCAAGTTTACCTCTGATAATGCTGTAGTGAATGTCCAAAATTGGGCTGAG AGGGGTTACTCAGTTGTCAATGTTCAATGCAAGGATCGATCCAAGCTATTGTTTGATGTGTTATGCAATTTGACAGACAT GGAGTATATTGTATTTCATGCTACTATAAACACCAATGATGGACGAGCATACTTGGTAATTATTCAACCTCCTTAGTCCT TCCATGAAATGTAGTAGTATTTTTCTTTTACTTGCTTGGTTTATGCTGTAAACTAACTTTCTTTTTTCAATTTCTGATCT CAGGAGTTTTATATAAGACACAAGGATGGCACACCAATAAGCTCAGAACCCGAGCGTCATCGTGTGATTCAATGCTTAAA AGCTTCTGTGGAGAGAAGGGCATCTCAGGTATAAGCTTCCTTCATAGCATGTTTGGATCAATTTGTTTTTTCTATGAATC AAGTTTGACACTGAGAAGCTACTTATGAAGTGACCGAGACTAATCAATTGTTAATTGTTTGGTTATAGGGTGTTCGATTA GAGTTATGCACAGAAGACAAGCAAGGGCTTCTAGCAGAAGTGATGAGAACTTTCCGAGAGAATGGGCTGAATGTGACTCG GGCTGAGATATCCACTGAAGGGAAAGTGGCTACTAATGAGTTCTATGTAACGGATGCGATTGGAAACATTGTTGACCAAA AAGTAATCGAATCTGTTAGGCAGAGAATTGGGTCAAGCAATTTGGAAGTGAAAGAGGTACCGTTGATGTATCATCACAAG GCGGAGAGAGAGGATGATACAGTTGGAGTTGGTGGGGCAGTGTTGTGGTCTATTGGGAGCCTTGTGAGAAGGAATCTGAT CAATTTGGGGCTGATCAAATCATGTTCTTAAAGATGATAGAGGGTGTGGAATGTTCTACTTCTATGCAACTTTAGTAGCT CATAATATTCTTTGCTTGAGGATTGGGTTTGTGTACATAAAGTTAAGGGTGGAATTTGGTGATAGTAGTTGTTCTAGTTG GTTTGGTAGGTGAAAGCGGATAGGTATATTATGTACAGCTGGTTGGCATTGGTTGTGAGATGAAATACAGAATTGGATTC TTGGTAGCAGAGAGACAGGGTTAGGTAGAGACACAACAAATTGGGTTCATTGTTCAGTTAGCAATTATTAGGTCATGTGT ACATACCGTCTTTTTTTCAATGTCTGTCTATTATCAATACTAATATTAGCGTTGACTCTATTATCTTTTTTTTAAGTAAG CGTTGACTCAATTATCAATCTCGCGTTTCAACTCTTTTTTGGGCTCCATGTTCTGTCACTGCTAGATGTTATTGGATCTA TTTTATAAGCATGTTCTAGAAGCCTGCTCGAAGACTAACAAAATTAATGCTTTGTTTGGTTGGGTGGAAAGAAAATGGAA GGAAGGAAAACACGGAAATCAATGAATGAATTTGGACTAGCTAAGTAACGGGATTTTTAACTGTATATTATTAATTATTT AGAAAATATTTAAATAACTAATTAATTGAGAAGTATTTGTTCCCAAACTAGGTTCTAAGTATTAAAAGTTGATGGATATA TGGGTTAGGAAAGGAAAAGTTAAGGCATCACTACTGAAGGGTTGTAGTTTATTTTTTCGATGTGAAAAAAAACTAGTAAC TATTTTTTCATCTCATCAAATTAGCAGTTTCAATGTACAACTTTTATTACATAAGAATGATTAATAGCGATAATGTGATA GCATATCAACGGCACGGCTTAGTGTGTGTTTGGTTTCAAATCTGGAGAGGCCAAACGTGGATCCAGAAATTCAAAAGCAA CTATTTCTTGCTTTTATAAACGTGGATCGGGGCCAAACGTGGATCCTGAATGGGTTTTCCAAACACACACTCAATCATCT TGGCATCCTGCGGGAAGAAGATCGAGATCATGTTTGGAGCACATATTCTACCCAACTACACAAACATAACAAACACATCA AATCTTCACATTATTCAATGAGTGACATGAATATTGTTCATATGTGGTTATAAATATATGTTTATAATTTTTTTTTTCAT TTTCTATTATCAACCTCAAGTGGTAAAAGCTAGGGGACATAAGGGTGGTGGTAAGAGCTAGGAGACATAAGAGTGGGGAG GGGAAGGTCCAGGGTTCAAATCTTGGAAGGGAACTTTAAAGGGATTTTCTAACTTACTAACAACTAACCACTAACATTTG CCTATAAAAAAAATCAACCTCATGTCTTCCCTTCACTTTTTATCATTCAGAACAATCCGACTCTATTTCCAACATCTCAG TCTCTACTCGTCTCTTTCTCTTTATCTCTAACTCAAACACCATTTTATTTTCCTTTCTGGGTTATGAAGAGCTGGGACTG GGACATATATGATAGATTTCTTTTTTGAAAAGACATATATGATAGATAGATATGGATATGATGGAGGGTTAAAAGATTCA ATTATGCTTTACTTCAGAATTACGGATTTATTATACTAATTAATAAAATAGCCAGCCGGCAGGAATAACATTGCTTACAA ATAAATATTTGGCACCTTCGAATATATTTATTCAACTTTCTTCTATGCACCAAAAAGTAAAAGAAAAATGATGTATTGAA CCTGCCAGACCATTTGATTTATTTGAATTAGTGGAAAATACATTAGGTAGAATTATTTGTCTTTTTTATCACATTGAAAA GTGAAATACTGATTAATAAATATATAGGTGATGAAAATGAAAAAAAAAAACAAATATATTCCATCGATGGGTAATGTGAG TTGTGAATACCCACTCTACCTAATAATCTGTCATATAATCAGATTCGGATATTGCTTAGATAGAGTCGTAGAGATAAGTT TTAAAGGAGTTGAAAGGATATAGTATTTAATAACGTCATTCCGACCATTATCTTCAAAAGTTTTAGAGTATGATTTTAAA TGTTTATAAAAACTTTGGTC
CDS sequence (LotjaGi2g1v0427800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATCATGGACTGGCCTGCTTGTACGGATGAATACGAAAAGCTTTTGATACGGATGAGCACCCCAAGGGTTGTCAT TGACAATGCTGTTTGCTCCACAGCGACAGTGGTCAAGGTTGATAGTGCTAGAAGACATGGTATTCTATTAGATGCTGTAC AAATTCTCACTGATCTCAATCTTTCAATTAAGAAGGCCTATATTTCCTCTGATGGCAAATGGTTCATGGATGTTTTTCAT GTCACTGATCAAAACGGAAACATGCTAACTGATGAGAGCGTTTTAAAATACATTGAACAGTCACTTGGGACCATTCATTA TGCGAGAACCAATTGCTCAAATGGTCTCACTGCCCTGGAATTAACTGGAACGGATAGAGTTGGTCTTCTATCTGAGGTTT TTGCTGTGCTGGCTGATCTTCAATGTGATGTTGTTGAGGCTAAGGTTTGGACGCACAATGGCCGCATTGCCTCTTTAATC TATGTAAAGGACTGTGATTCTGGTTCCACTATTGAGGATTCCCAGAGAATTAACAACATTGAAGTGCGTTTAAGAAGTGT TTTGAAGGGAGACAATGACATTAGAAGTGCAAAAACTTCTGTCTCTTTGTCTGTCATGCACACGGAAAGAAGGCTTCACC AGATGATGTTCGCAGACCGTGATTACGAGAGGACCCCCATTCTCAAGTTTACCTCTGATAATGCTGTAGTGAATGTCCAA AATTGGGCTGAGAGGGGTTACTCAGTTGTCAATGTTCAATGCAAGGATCGATCCAAGCTATTGTTTGATGTGTTATGCAA TTTGACAGACATGGAGTATATTGTATTTCATGCTACTATAAACACCAATGATGGACGAGCATACTTGGAGTTTTATATAA GACACAAGGATGGCACACCAATAAGCTCAGAACCCGAGCGTCATCGTGTGATTCAATGCTTAAAAGCTTCTGTGGAGAGA AGGGCATCTCAGGGTGTTCGATTAGAGTTATGCACAGAAGACAAGCAAGGGCTTCTAGCAGAAGTGATGAGAACTTTCCG AGAGAATGGGCTGAATGTGACTCGGGCTGAGATATCCACTGAAGGGAAAGTGGCTACTAATGAGTTCTATGTAACGGATG CGATTGGAAACATTGTTGACCAAAAAGTAATCGAATCTGTTAGGCAGAGAATTGGGTCAAGCAATTTGGAAGTGAAAGAG GTACCGTTGATGTATCATCACAAGGCGGAGAGAGAGGATGATACAGTTGGAGTTGGTGGGGCAGTGTTGTGGTCTATTGG GAGCCTTGTGAGAAGGAATCTGATCAATTTGGGGCTGATCAAATCATGTTCTTAA
Protein sequence (LotjaGi2g1v0427800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIMDWPACTDEYEKLLIRMSTPRVVIDNAVCSTATVVKVDSARRHGILLDAVQILTDLNLSIKKAYISSDGKWFMDVFH VTDQNGNMLTDESVLKYIEQSLGTIHYARTNCSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLI YVKDCDSGSTIEDSQRINNIEVRLRSVLKGDNDIRSAKTSVSLSVMHTERRLHQMMFADRDYERTPILKFTSDNAVVNVQ NWAERGYSVVNVQCKDRSKLLFDVLCNLTDMEYIVFHATINTNDGRAYLEFYIRHKDGTPISSEPERHRVIQCLKASVER RASQGVRLELCTEDKQGLLAEVMRTFRENGLNVTRAEISTEGKVATNEFYVTDAIGNIVDQKVIESVRQRIGSSNLEVKE VPLMYHHKAEREDDTVGVGGAVLWSIGSLVRRNLINLGLIKSCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 442 | 439 | 2.6E-273 | ||
| PANTHER | 4 | 442 | 439 | 2.6E-273 | – | |
| SUPERFAMILY | 32 | 101 | 70 | 5.95E-10 | – | |
| CDD | 35 | 106 | 72 | 5.23814E-39 | – | |
| ProSiteProfiles | 37 | 113 | 77 | 8.719 | ||
| SUPERFAMILY | 114 | 184 | 71 | 1.37E-11 | – | |
| Gene3D | 116 | 199 | 84 | 8.0E-8 | – | |
| ProSiteProfiles | 118 | 202 | 85 | 11.35 | ||
| Pfam | 119 | 171 | 53 | 7.2E-7 | ||
| CDD | 247 | 321 | 75 | 1.85393E-36 | – | |
| ProSiteProfiles | 249 | 323 | 75 | 7.541 | ||
| SUPERFAMILY | 323 | 393 | 71 | 9.93E-11 | – | |
| Gene3D | 326 | 411 | 86 | 1.2E-8 | – | |
| ProSiteProfiles | 327 | 406 | 80 | 13.813 | ||
| Pfam | 328 | 390 | 63 | 2.1E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0427800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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