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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0429200 |
| Transcript ID | LotjaGi2g1v0429200.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triose-phosphate transporter family protein; TAIR: AT1G12500.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500; TrEMBL-Plants: tr|B9GW30|B9GW30_POPTR Phosphate translocator-related family protein; Found in the gene: LotjaGi2g1v0429200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92633883..92635180) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGGAGGCGCAGACATGGACTACCCGCCGAATGAGCAACCCAAGGTTAACCGCCGACGAAGTCGCGCTCGAGATTCC GGCCACCCCACCCGGTGACGTCCGCCACTGGCAACCCTTCACCTCCCATTTCTCTCCCGCCATGGTAACCGCCGCGATCA TCGCCTCATGGTACCTCTCCAACATCGGCGTCCTCCTCCTCAACAAGTACCTCCTCAGCTTCTACGGTTACCGCTACCCT ATCTTCCTCACCATGCTCCACATGATTTCCTGCTCCGCCTACAGCTACGGCGCAATCAACTTCCTCGACCTCGTTCCCTT ACAGCACATTCACTCCAAGAAACAGTTCCTCAAGATCTTCGCTCTCAGCATCATCTTCTGCTTCTCCGTCGTCTGCGGCA ACACCTCCTTACGCTACCTCCCTGTTTCCTTCAACCAAGCAATCGGCGCCACCACCCCCTTCTTCACCGCCGTCTTCGCC TTCATCATCACCTGCAAGAAAGAATCCGCCGAGGTTTACCTCGCTCTGTTGCCGGTAGTCTTCGGGATTGTTCTTTCCAG CAACAGTGAGCCTCTGTTCCATCTCTTCGGATTCTTGGTCTGCGTCGGTTCCACGGCGGGGCGTGCTCTGAAATCGGTGG TTCAGGGGATTATCTTGACCTCTGAATCGGAGAAGCTGAACTCCATGAACTTGCTTCTCTACATGGCTCCCATGGCGGCG ATGATTTTGCTTCCTTTCACTCTCTACATCGAAGGGAATGTGGCGGCGGTTACGCTTGAGAAAGCTAAAGGGGATCGGTT TATCGTTTTCTTGTTGGTTGGGAACGCGACGGTGGCGTATTTGGTGAACCTCACGAATTTCTTGGTTACCAAACATACCA GTGCGTTGACATTGCAAGTGTTGGGGAATGCTAAAGCGGCGGTGGCGGCGGTGGTTTCTGTTCTGATTTTCAGGAACCCG GTGACGGTGATGGGTATCACTGGATTCGCTGTGACAATCATGGGTGTGCTTCTCTACAGTGAGGCAAAGAAGAGATCAAA AGTTACATCTCATTGACAGATAATTCTCAACATTCTTTTTTCTTAATAAGAAAAGTAATTCCACAAACACCTTGCTTTAT TTTTTTATATTGCTAAATTTACATTTACATTTGATTTGATTAGATTAAATTTCTGGATCAAATCATAGTAATTGGATTGT ATAGGAAGAAGGAGGGGGTTAGGGAAAGGGTTATGTTCTTTTTTCATTTTTTTGCTGCTCTTTAATATCCTTGCCTTGTA ATCTTATAAGGTGGTTGA
CDS sequence (LotjaGi2g1v0429200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGAGGCGCAGACATGGACTACCCGCCGAATGAGCAACCCAAGGTTAACCGCCGACGAAGTCGCGCTCGAGATTCC GGCCACCCCACCCGGTGACGTCCGCCACTGGCAACCCTTCACCTCCCATTTCTCTCCCGCCATGGTAACCGCCGCGATCA TCGCCTCATGGTACCTCTCCAACATCGGCGTCCTCCTCCTCAACAAGTACCTCCTCAGCTTCTACGGTTACCGCTACCCT ATCTTCCTCACCATGCTCCACATGATTTCCTGCTCCGCCTACAGCTACGGCGCAATCAACTTCCTCGACCTCGTTCCCTT ACAGCACATTCACTCCAAGAAACAGTTCCTCAAGATCTTCGCTCTCAGCATCATCTTCTGCTTCTCCGTCGTCTGCGGCA ACACCTCCTTACGCTACCTCCCTGTTTCCTTCAACCAAGCAATCGGCGCCACCACCCCCTTCTTCACCGCCGTCTTCGCC TTCATCATCACCTGCAAGAAAGAATCCGCCGAGGTTTACCTCGCTCTGTTGCCGGTAGTCTTCGGGATTGTTCTTTCCAG CAACAGTGAGCCTCTGTTCCATCTCTTCGGATTCTTGGTCTGCGTCGGTTCCACGGCGGGGCGTGCTCTGAAATCGGTGG TTCAGGGGATTATCTTGACCTCTGAATCGGAGAAGCTGAACTCCATGAACTTGCTTCTCTACATGGCTCCCATGGCGGCG ATGATTTTGCTTCCTTTCACTCTCTACATCGAAGGGAATGTGGCGGCGGTTACGCTTGAGAAAGCTAAAGGGGATCGGTT TATCGTTTTCTTGTTGGTTGGGAACGCGACGGTGGCGTATTTGGTGAACCTCACGAATTTCTTGGTTACCAAACATACCA GTGCGTTGACATTGCAAGTGTTGGGGAATGCTAAAGCGGCGGTGGCGGCGGTGGTTTCTGTTCTGATTTTCAGGAACCCG GTGACGGTGATGGGTATCACTGGATTCGCTGTGACAATCATGGGTGGTTGA
Protein sequence (LotjaGi2g1v0429200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEAQTWTTRRMSNPRLTADEVALEIPATPPGDVRHWQPFTSHFSPAMVTAAIIASWYLSNIGVLLLNKYLLSFYGYRYP IFLTMLHMISCSAYSYGAINFLDLVPLQHIHSKKQFLKIFALSIIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAVFA FIITCKKESAEVYLALLPVVFGIVLSSNSEPLFHLFGFLVCVGSTAGRALKSVVQGIILTSESEKLNSMNLLLYMAPMAA MILLPFTLYIEGNVAAVTLEKAKGDRFIVFLLVGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNP VTVMGITGFAVTIMGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 4 | 335 | 332 | 9.1E-187 | – | |
| PANTHER | 4 | 335 | 332 | 9.1E-187 | – | |
| Phobius | 44 | 67 | 24 | - | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Pfam | 50 | 335 | 286 | 4.4E-44 | ||
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 104 | 26 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| SUPERFAMILY | 110 | 187 | 78 | 7.72E-6 | – | |
| TMHMM | 116 | 138 | 23 | - | – | |
| Phobius | 116 | 137 | 22 | - | – | |
| Phobius | 138 | 142 | 5 | - | – | |
| Phobius | 143 | 163 | 21 | - | – | |
| TMHMM | 148 | 165 | 18 | - | – | |
| Phobius | 164 | 169 | 6 | - | – | |
| Phobius | 170 | 186 | 17 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 187 | 191 | 5 | - | – | |
| Phobius | 192 | 210 | 19 | - | – | |
| Phobius | 211 | 230 | 20 | - | – | |
| Phobius | 231 | 248 | 18 | - | – | |
| TMHMM | 233 | 255 | 23 | - | – | |
| Phobius | 249 | 267 | 19 | - | – | |
| TMHMM | 268 | 290 | 23 | - | – | |
| Phobius | 268 | 289 | 22 | - | – | |
| Phobius | 290 | 295 | 6 | - | – | |
| TMHMM | 295 | 317 | 23 | - | – | |
| Phobius | 296 | 317 | 22 | - | – | |
| Phobius | 318 | 336 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0429200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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