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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0432100 |
| Transcript ID | LotjaGi2g1v0432100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT4G23060.1 IQ-domain 22; Swiss-Prot: sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14; TrEMBL-Plants: tr|I1JA45|I1JA45_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0432100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92904418..92908768) extracted from Lotus japonicus Gifu genome v1.2.
GTCTCATCTGGTTGAAATCAAATGGTTTTAGAAAATGAACATCAAAATGCAACACCACCTATTAAACTAAACTAGTTGCT TTCACGATTTACAATGAGTTCCTGGTCCGTGTCATTTCAGCACTTTGCTATGCTTGCTTACACAAAAAGCCACCCTTTCA TACTTCTCTCTCTTTCACAAAACTTAGAAGTTTCTCACTCTCTTCTCCTCCTTCCAAGGTCTCATCACCTTCACCGTACA ATATCTACCACCACCACTATTCCACTATCACCACCGCACATCTTCAAAATCCCATGGTTTTTAGCACTACAAGTTAATCA ATGGGGAAGGCTTCAAAGTGGTTTCGCGGTCTTCTCGGTATGAGAACACCAGACTCATCATCACCATCTCCAAATAAACC ACCCAAAGAGAAACGCCGATGGAGCCTCGTCAAGTCCTACAGAGAAAAAGACAACCACCCCGTAACAGCACCCGTCCAAG GCGGCAACAAACACGTCTTAGCTGAGCTGGCTCTCGCAACCGCCACCGCTTCCATGGCAGAAGCCACCAGACTCACCGGA ACCGCCGCTTCCGGAGTCACTCCTCGCGAAGAGTGGGCAGCCGTTAAGATTCAAGCCGCGTTTCGAGGCTGTTTGGTTCG TATCTCTAATTTCATTCATTTTCATCATTCTCTTATACTTTCCAAAATATAACTAACATAGAGTTGATGATATATAACAT GTTATTTAATCATATCTCTAATTAATATGAGACTTCGCGACTAATATAGCTATCTATTTTAGTTTTTTATTTATTTACTT TTTATTGAATTGTGTGTGGTGAAACAAGGTTTGAGTCTAATAAGGCAAAAGAAAAACCGTGGAAGATGTTGAAAGCGAAA ACAGGGACAATGCTCTGTTTGTGATGTGAGACGGTGTGTGTTTTTTGGGAAAGTGGTTCCATTTTCTCGTATGTCGTTTT GCAAAGTTGGAACTCATCAAGTACCGCTGCAAATTATGGCAATTGCCATTTCCCTTTATTTCACCGATCAATCAAACATT TAATTACAAGAACTGTTTTTCTGTGGTGACAGCCGTGAACGTGGAACGAGGTGCTTGCCCTTAATGCGTTGTCATCGCTT TCTTCCCTCCTTTACTCTCTCTGTGTTGGCGTTTTCACAATTAAATGTGTCACACTTCTTTTTTCACCCCTTTTCACTAT TCACAAGTAGTACCACACTACCACTAGTTTTTTTAAGAACCTCATTCATTTATCTTATTGCATCACATTAAGTTAAGTGA GTAGACCTTGGTGAGTGGTGACCAAACACTTCTCTATACACACCGTCTAGATATCGAACCCTGGACTAATACTTAAGGAT ACCAACTATTTAACCATTATGCTATGCTGGGCCTTTGTTGGTATGATAATTAATTGTGAAGCTAGAAGAAACAAAATATG TGAGCTTTCTGAAATTAATTTAGGCATTGCAAGATGGATTCTATCCCTTATTAGGTCCCTGTGTTCTGCAGTACTTGTGC TGTATGAGCAATTGATTACACTTTACCGTATCCTCTGACCAAATCTACTGTGAAGCCGGTTGATTTGAAAATTCATCTGC TTTTTCTCTGCTATGACCTCTGGTCTCTTGGGGTTTTGTGGGGACACATACAATCTAAACTTTGCTCTGCCCCCTTGTCT GTAAGATCAACGTGTGTTTCTTTTAAAGTCGACTTGTATGACTTTTTCAACTCACCATCTTTTTCTTTGGTCCATGCTTT TTTATTTTATAACACATTAGTTAGGTTAGTTGAAAAATTAATTAATTCCTACTAATATTAGTATAATGTCTCAACGTGTG CAACCATACTTCAATAATGCTGATTAATCTATGGAGTCTTGTCCAAACATTGCATAAATGTCGGCACAAGTTGGTAGTGT ATCTTTTTTTTTTAATTCTGGTGTTAACCAAGCTACCCTATCCGATATGAGACTAATTATTCGCTAGCTCCACTGTTAGG AATAGAGAGACATGAAGAAATGAGAGAGAAAGTAAAGATGCGATAGGTGATTTGATTGATAGAGAACAGAGAAATAGATA GAAATGAAGGCGGAAAAGAAATGGAGAGGTGTGTATATATCATAACTCATATAAGCATATCATAAGCATGAGTTAAGGTT TATTAATCTTATCCTTATATCTACTAAATAATTATCAAAGAAGCATTAAACGTTATGGGCATTTAGCTAGCTAGTATTAG TTTATTTACTTAAGATCTTATAGGGTGTCCTATTACAACTCTGAATTCTATCTTGTTGAAATCAAGTGACTAATTCTGCT CATCTGCTTTATGATGTTCAAATTTAGGCAAGGAAGGCACTGCGAGCGTTGAAAGGATTGGTGAAGCTACAGGCATTGGT GAGAGGTCACATTGAGAGGAAGCGCACGAAAGAGTGGGTGCAAAGAGTGCAAGCACTCTTACGTGCACAGACCCGAGCCC GCACTGCTCGGGGCCAAATTCTAGATCAGGCCTCGTTTCATATAGCAAAGTCATTCACAGGCCCCCTCCATGTAAGTATT GCAATTGCCCCTTCCATTGCTGTGAAGGATGGCAACTTTTTGTTCTAGCTAGTGAGGTTTCATGCTTTTAAAGTGGATGT GCCCTATTTCATCAATCAAAATGCAAATGCTTTTGGGCATACATGTAGTAACAGTTGAAGTAGTGTCATATATTAATATA ACTACAAAGATTGTTGCTATTCATCCTCTTTTAAGTTAATGATATCACGTGGCTGAACATATTTAATTTGTCACATGTTT AGATTCACTTTTAATCTTTCCAATAACACTTTTTCCACTTAAAAGCAACTCCTAATAATTTAAATGTGGAGAGTGTCATG TGTCCCTTTACCTAGCAACTTAAACTTTTGGGATAATTGGTTCATGACATGGTCCTGTATGACTTAATGATCCACGCTTC AAGCCTAAGTGGACTTTTGCGTAAAGGGGCGTATTAGAGATATAATATTAAACATTCATATGCTCATTATCTAACACTTT AAGTTTGTGGGATAATTGGTTCTTGACAAAAACCTACCAATTTTATAAAACGAGCACGGAATCATATTGCTTATGCTGAA AATACATTGCTCTTTACGATAATTAAATCCCAAATAACTTCCATTCACAGGGTCCAGTAACACCTGAGAAATTTGAAAGC CCGATCAGTTCCGAGAGTGTGAAATACAGTCAGTCACCTGCACTCAAGGTATTTTACTATTTTCTAACCACTCCTTCCAA CAAGGTTAAACTCACTCATTGCATAGCAAATCCAATTTGTCAATTTATGGAAAAATTAATTTCATCAATTGCAGAGAAAC ATCTCCAAATCATGTGGCCGAATCAATGGCAATCAAGAGAAATGCGGCGGGACTAGATCAGATAATCGGGTAGATGAACA ATCATGGACTCACCGTAAGTCATGGATGAGAACTTGTAGCATGGATGATGAAACAAGTTTCAGGATTCTTGACATAGATT CCGGAAAACCGCACATCAGATCTAAACGGAGAAACCTCTTCTATTCCGCCAGCCAAGCTTTGCTTCCCGATCATTACAGT CAGAACTTGACCACCACAACAAAGGACTCAACATCTTCTTGTGAAGTTGGTTCTCGCAGCAGCCCCCTGAAAATGAATGA GGTTGAAGAGAACTCATTATCCGTGGCCTCTTCGTACCAAGACGGTAGCTTGAAAAAAAGTCCTTTAATTACTCCTACCA AGAGTGATGGCTCAAGAAGTAATCTAAGTGGCTATACTGCTGATTCCTATCCAAGTTACATGGCTTACACTGAGTCTTCA AAGGCTAAGTTAAGATCTCTTAGTGCTCCAAAACAAAGAGCACCGCGATATGAGAGGTCTAGTTCATCTAAATTGGCCAC ACAAAGGATAGCTGCATTGCGCGCAAGCTTCACTAGCAAAGACTATCCTGGTTCTGGTCGTTTAGACAAGCTTGGTTTGC CTGTTGGTTATAGTTTCTGACAAATTAAGCTTCACTAGCAAAGCATGTCTCTGATCTTGCTAACCTGTTGTTGTATTTAT CTTCATACCTTAATTTCCAAGTTGAATTTTCCTTAGTGGTAGCTTTAGAATTTTATGAGCAGTGCATAGTGAATACCACT TCCAAATGTTAAAAATTATGATTTGACCTGAGATTTGTATGTGAAGTATCTTTTGCCTGAAGCCTATTTGGAAATACTTT TTCTTTGAAGATGTAGTTAAGTAGCAAAATATGTAAGCATTTATCCAAGATTGAGATCAACATTTCTCACTTTTTATGTT CTCTTCATTAATAACTAATACATTAGTAAAA
CDS sequence (LotjaGi2g1v0432100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGGCTTCAAAGTGGTTTCGCGGTCTTCTCGGTATGAGAACACCAGACTCATCATCACCATCTCCAAATAAACC ACCCAAAGAGAAACGCCGATGGAGCCTCGTCAAGTCCTACAGAGAAAAAGACAACCACCCCGTAACAGCACCCGTCCAAG GCGGCAACAAACACGTCTTAGCTGAGCTGGCTCTCGCAACCGCCACCGCTTCCATGGCAGAAGCCACCAGACTCACCGGA ACCGCCGCTTCCGGAGTCACTCCTCGCGAAGAGTGGGCAGCCGTTAAGATTCAAGCCGCGTTTCGAGGCTGTTTGGCAAG GAAGGCACTGCGAGCGTTGAAAGGATTGGTGAAGCTACAGGCATTGGTGAGAGGTCACATTGAGAGGAAGCGCACGAAAG AGTGGGTGCAAAGAGTGCAAGCACTCTTACGTGCACAGACCCGAGCCCGCACTGCTCGGGGCCAAATTCTAGATCAGGCC TCGTTTCATATAGCAAAGTCATTCACAGGCCCCCTCCATGGTCCAGTAACACCTGAGAAATTTGAAAGCCCGATCAGTTC CGAGAGTGTGAAATACAGTCAGTCACCTGCACTCAAGAGAAACATCTCCAAATCATGTGGCCGAATCAATGGCAATCAAG AGAAATGCGGCGGGACTAGATCAGATAATCGGGTAGATGAACAATCATGGACTCACCGTAAGTCATGGATGAGAACTTGT AGCATGGATGATGAAACAAGTTTCAGGATTCTTGACATAGATTCCGGAAAACCGCACATCAGATCTAAACGGAGAAACCT CTTCTATTCCGCCAGCCAAGCTTTGCTTCCCGATCATTACAGTCAGAACTTGACCACCACAACAAAGGACTCAACATCTT CTTGTGAAGTTGGTTCTCGCAGCAGCCCCCTGAAAATGAATGAGGTTGAAGAGAACTCATTATCCGTGGCCTCTTCGTAC CAAGACGGTAGCTTGAAAAAAAGTCCTTTAATTACTCCTACCAAGAGTGATGGCTCAAGAAGTAATCTAAGTGGCTATAC TGCTGATTCCTATCCAAGTTACATGGCTTACACTGAGTCTTCAAAGGCTAAGTTAAGATCTCTTAGTGCTCCAAAACAAA GAGCACCGCGATATGAGAGGTCTAGTTCATCTAAATTGGCCACACAAAGGATAGCTGCATTGCGCGCAAGCTTCACTAGC AAAGACTATCCTGGTTCTGGTCGTTTAGACAAGCTTGGTTTGCCTGTTGGTTATAGTTTCTGA
Protein sequence (LotjaGi2g1v0432100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKASKWFRGLLGMRTPDSSSPSPNKPPKEKRRWSLVKSYREKDNHPVTAPVQGGNKHVLAELALATATASMAEATRLTG TAASGVTPREEWAAVKIQAAFRGCLARKALRALKGLVKLQALVRGHIERKRTKEWVQRVQALLRAQTRARTARGQILDQA SFHIAKSFTGPLHGPVTPEKFESPISSESVKYSQSPALKRNISKSCGRINGNQEKCGGTRSDNRVDEQSWTHRKSWMRTC SMDDETSFRILDIDSGKPHIRSKRRNLFYSASQALLPDHYSQNLTTTTKDSTSSCEVGSRSSPLKMNEVEENSLSVASSY QDGSLKKSPLITPTKSDGSRSNLSGYTADSYPSYMAYTESSKAKLRSLSAPKQRAPRYERSSSSKLATQRIAALRASFTS KDYPGSGRLDKLGLPVGYSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 416 | 416 | 1.9E-100 | – | |
| MobiDBLite | 1 | 33 | 33 | - | – | |
| PANTHER | 1 | 416 | 416 | 1.9E-100 | – | |
| SMART | 89 | 111 | 23 | 0.0065 | ||
| ProSiteProfiles | 90 | 118 | 29 | 9.853 | ||
| Gene3D | 91 | 131 | 41 | 4.4E-8 | – | |
| Pfam | 92 | 111 | 20 | 8.1E-6 | ||
| SMART | 112 | 133 | 22 | 58.0 | ||
| ProSiteProfiles | 114 | 141 | 28 | 8.938 | ||
| Pfam | 117 | 132 | 16 | 0.13 | ||
| MobiDBLite | 283 | 345 | 63 | - | – | |
| Pfam | 319 | 402 | 84 | 1.3E-11 | ||
| MobiDBLite | 365 | 386 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0432100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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