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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0435300 |
| Transcript ID | LotjaGi2g1v0435300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GH3 family protein; TAIR: AT2G47750.1 putative indole-3-acetic acid-amido synthetase GH3.9; Swiss-Prot: sp|O82243|GH39_ARATH Putative indole-3-acetic acid-amido synthetase GH3.9; TrEMBL-Plants: tr|A0A0R4J433|A0A0R4J433_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0435300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93182942..93186480) extracted from Lotus japonicus Gifu genome v1.2.
CCCAACCCATACTATTTAATTTGCTAAAAATTTCTGTGTCCATCTGGAGTTTTTCTGGGCAAATAAGCAAAGCAAATTAA GAACAAAGAATCCATCACAATTATGAAGAGACACAATGCCTAGCAGCAACATTAATCGGAAATAATGTCTCAAATATGGA AGAGTCTACCACCTTATTTCTACAGGACTAAAGCCAATATCTACAAGGAAACACGAGTTAGAATCGTACGTGCGGGGTCA TTGATGCATCTCTCTCTGCTTTTTTCTTGCACGGTAAGATGTTCTGCTTATTTTTGGATACTAGTGGAGTATGAATTGAC AAAGTATCTTTTTCTTTGTGAACAAATTGAACAAGTAATTGTAAATTTTACATATTTAGTATTTTTTTTAATCATTAATT CATGACTCTGTGTGATTGTTTTAGTGGTTTTCTATTGGTGCTCGATCAATAAAGTTTGACACACAAAAAAGATGAAATTC ATTTCATGCTTTTTAATCATTTCTGTTTTTAAACATAACGTATTGTAATTGTTTACATAATTACATTCATAGATAATAGG CTTGTTTTTCCGATGGAGAAAAAAAATAGATAATGGGCTTAAATATGTTATATATCTATATATATGTGGGTACGAGGCTT TTCAAACCATGGAAAAGTAATTAGTTTGTGAGTTCTGTTACACTTTTGTCTCTTGTAGTTCTCTTTTTCAGTCTTTCTTT TCGTGAGCATCATGGACGGAAAGAAATTGGAGTACAAAGGTGAGGAAGCACTGAATGAGATTGAGAGGTTGACAAAGAAT AGTGCTGAAATTCAGGAAAGCCTTTTAAAACAGATATTAAGTCAGAACAAGGAAACTGAGTATTTGAGTAAGTATATGAA GAAGGGAGATCATGTAACTGATGACGTCATAGCAGAGTTTAAGCTTCATGTTCCAGTTATAAGTTATGAAGAGATCTTGC CATATATCCAGAGAATTACAAATGGGGAAGATTTTTCTCTCATTACTGCTCAACCAATAACAGAGATGTTATGCAGGTAC AGCTAGCTAGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATTCATTGCTCACTCGCTTGTGT TTGTATTAATTGAGTGTATTTGTTGAGAAGTTTCACATTAAATAGAAATTTATAAACTAAATAAGTGTTTGTAAAAGTTA GAACAACCTTAACTCTAACTAGTTTTTGGGTAGAGTTATACGTAGCTCAAATTCTAACACTCTCAAATCATTTGGTATAT ATGTACAGTTCAGGAACATCAGGTGGAGAGCCTAAAATGGTGCCATCAACTGCTGAATATCTTGATCGTCGTACCTTCAT GTACAATCTTATCACGGCAATCATGAATAAGTTAATATTAATCATGCTCTTAGTTAATTTCATTGATTTAAATAAACATT TCAATCTTACCATGATCATGAATTAACTTGATCATCTTCAACTTCAGATATGTTCCTGGTCTTGACAAGGGCAAGGCAAT GTATCTCAACTTTGTAAGGACAGAAATGCCCCCAACTCCTTGTGGCTTACCGGTTAGGACTGCATTGACAAGCTACTACA AGAGCAAGCACTTCCTGTGCCGCGCATGTGAGCCTTGGAATGATTTCACAAGCCCTGACCAAACCATTCTATGTGATGAC ATAAACCAAAGCATGTATTGCCAGCTTCTAGCTGGTTTGGTTAACCGCCACAATGTCCTAAGGCTTAGTACTGCATATGC CTCTGCATTTCTCAGAGCGATCTCCTTCCTTGAAAATAACTGGATGAGCCTCTGTGAGGACATGCGCAGTGGAAAGCTCA GTTCCTTTGTCACAGACCCTGGTTGTCGCGCCGGCATGTCCACGGTGCTTTCGTCCCCTGTCCCACATCTTGCAGATGAG ATCGCTGAAATTTGTAGCCAAAAGTGTTGGAAGGGGATTCTCTGTCAGCTTTGGCCTAAGGCCAAGTACATAGAAACAGT GATCACTGGCTCCATGGCTCAATATGTTCCTACACTGCAGTATTACAGTGATGAGAAATTGCCTTTGGTTTGCACTAGGT ATTCTTCTTCTGAGTGTCACTTTGGGATCAACATAAAACCTTTGAGTGACCCTGCTGATGTTGCTTTTACATTGTTGCCT AACATGGGTTACTTTGAGTTCCTTCCTATTGGACATAATGAGACACTAATGATGGACTTTGAGGAGGAGCATGTTCCTAA TGACAAGCTCGTAGATTTGGGGAATGTCAAGCTTGGTTGCTTTTATGAGATTGTGGTCACAACCTTTGCTGGTAAATTTT TAATCAGGAAAATGTTAGTTAAACATATGTATAGTGTAACTGCATCTTATACATAGATTTTGCGACCGTTTTATGTTTTA AAATAATCACATCACATCTACATATGTTAATAACAAAACGCTGAAAATATTCATAGGGGTTTGAAATCACCACAAGTTGC ACATATGAAAAGTACGATTAGAGGTGATTTCAAACTCAAAATAACACTTAAAAAAGTTGCATTTTGGCCGTTCAATTGGG TATTGTTTATATTGTTGTCCAATCAAAAACTCAACTAGCCACTATTTCAATATTTTATTAATGTGATTACCTTTTTAACT TCTCATTTTTAACTTCTCATTTTCAGTCCACGTGCCATGTTGTAATTTTGAGTAAGGTTTATTCCAGTAACATAACCCAT TTATTATTATAGTGATATTCATTTACCAATTTATTTTCTTCCTCTAACTTTACAATATTGTGTTCCCAATGATCAGGGCT ATACCGATACCGTGTTGGTGATGTACTTCAAGTGGTTGGGTTTTACAATAAAGCTCCACAATTTAGATTCATTTGTAGGA AAAATGTTGTGATCAGCATTGACCATGACAAAACTAGTGAAGAGGATTTGCATAAGAGTGTCACTGCTGCCAATAAATTG TTAGAGTCTCATGATGCTCTACTAGTGGAATACACTAGTTACTCTGATACTTCTTCATTGCCAGGACACTACGTATTGTA CTGGGAAATTCTGTATTACGGTTCAAAAATAGAGTCACTTGATACAAATATTATTAAAGAATGTTGCATTGCGGTTGAAG AGCAACTAAACTATGTATATTGGCATTTGCGCAATGACGGGTCAATAGGACCACTTGAGATACGTGTGGTGGAGGCAGGA ACATTTGATGCATTGATGGATTTCTTCATTAGCCAAGGGGCTTCAATTGGTCAATACAAAACACCAAGGTGCATTAAATC TAATAAAGCACTCAACTTGCTCGACTCCAAAGTTACTGCTTCCTTTTTCAGTCCTAGAGATCCCCAAAGAAGGATATAAG AAGGTGTGTTAAGTTAAAAAGGTTGATTAAGGTGTTGTTTGGAAGAATTTACTTGAGTTTATTTTATAACATATACACTT ATGCAAGTGTTGTTCCTATTTGTAAGTTGTTTAATTTTGAGCTTATTTTCATAAGTTGATCAAATTGATCTATGAATAAA AGTTTATGATTACCTATAA
CDS sequence (LotjaGi2g1v0435300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGAAAGAAATTGGAGTACAAAGGTGAGGAAGCACTGAATGAGATTGAGAGGTTGACAAAGAATAGTGCTGAAAT TCAGGAAAGCCTTTTAAAACAGATATTAAGTCAGAACAAGGAAACTGAGTATTTGAGTAAGTATATGAAGAAGGGAGATC ATGTAACTGATGACGTCATAGCAGAGTTTAAGCTTCATGTTCCAGTTATAAGTTATGAAGAGATCTTGCCATATATCCAG AGAATTACAAATGGGGAAGATTTTTCTCTCATTACTGCTCAACCAATAACAGAGATGTTATGCAGTTCAGGAACATCAGG TGGAGAGCCTAAAATGGTGCCATCAACTGCTGAATATCTTGATCGTCGTACCTTCATGTACAATCTTATCACGGCAATCA TGAATAAATATGTTCCTGGTCTTGACAAGGGCAAGGCAATGTATCTCAACTTTGTAAGGACAGAAATGCCCCCAACTCCT TGTGGCTTACCGGTTAGGACTGCATTGACAAGCTACTACAAGAGCAAGCACTTCCTGTGCCGCGCATGTGAGCCTTGGAA TGATTTCACAAGCCCTGACCAAACCATTCTATGTGATGACATAAACCAAAGCATGTATTGCCAGCTTCTAGCTGGTTTGG TTAACCGCCACAATGTCCTAAGGCTTAGTACTGCATATGCCTCTGCATTTCTCAGAGCGATCTCCTTCCTTGAAAATAAC TGGATGAGCCTCTGTGAGGACATGCGCAGTGGAAAGCTCAGTTCCTTTGTCACAGACCCTGGTTGTCGCGCCGGCATGTC CACGGTGCTTTCGTCCCCTGTCCCACATCTTGCAGATGAGATCGCTGAAATTTGTAGCCAAAAGTGTTGGAAGGGGATTC TCTGTCAGCTTTGGCCTAAGGCCAAGTACATAGAAACAGTGATCACTGGCTCCATGGCTCAATATGTTCCTACACTGCAG TATTACAGTGATGAGAAATTGCCTTTGGTTTGCACTAGGTATTCTTCTTCTGAGTGTCACTTTGGGATCAACATAAAACC TTTGAGTGACCCTGCTGATGTTGCTTTTACATTGTTGCCTAACATGGGTTACTTTGAGTTCCTTCCTATTGGACATAATG AGACACTAATGATGGACTTTGAGGAGGAGCATGTTCCTAATGACAAGCTCGTAGATTTGGGGAATGTCAAGCTTGGTTGC TTTTATGAGATTGTGGTCACAACCTTTGCTGGTAAATTTTTAATCAGGAAAATGTTAGTTAAACATATGTATAGTGTAAC TGCATCTTATACATAG
Protein sequence (LotjaGi2g1v0435300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGKKLEYKGEEALNEIERLTKNSAEIQESLLKQILSQNKETEYLSKYMKKGDHVTDDVIAEFKLHVPVISYEEILPYIQ RITNGEDFSLITAQPITEMLCSSGTSGGEPKMVPSTAEYLDRRTFMYNLITAIMNKYVPGLDKGKAMYLNFVRTEMPPTP CGLPVRTALTSYYKSKHFLCRACEPWNDFTSPDQTILCDDINQSMYCQLLAGLVNRHNVLRLSTAYASAFLRAISFLENN WMSLCEDMRSGKLSSFVTDPGCRAGMSTVLSSPVPHLADEIAEICSQKCWKGILCQLWPKAKYIETVITGSMAQYVPTLQ YYSDEKLPLVCTRYSSSECHFGINIKPLSDPADVAFTLLPNMGYFEFLPIGHNETLMMDFEEEHVPNDKLVDLGNVKLGC FYEIVVTTFAGKFLIRKMLVKHMYSVTASYT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 415 | 413 | 4.4E-205 | – | |
| PANTHER | 3 | 415 | 413 | 4.4E-205 | ||
| Coils | 10 | 30 | 21 | - | – | |
| Pfam | 16 | 411 | 396 | 5.5E-124 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0435300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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