Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0437500 |
| Transcript ID | LotjaGi2g1v0437500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gdt1-like protein chloroplastic-like; TAIR: AT1G64150.1 Uncharacterized protein family (UPF0016); Swiss-Prot: sp|Q94AX5|PAM71_ARATH Protein PAM71, chloroplastic; TrEMBL-Plants: tr|A0A151R551|A0A151R551_CAJCA UPF0016 membrane protein sll0615 family; Found in the gene: LotjaGi2g1v0437500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93414016..93419252
CDS sequence (LotjaGi2g1v0437500.1
Protein sequence (LotjaGi2g1v0437500.1
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 151 | 151 | - | – | |
| PANTHER | 57 | 363 | 307 | 5.7E-149 | ||
| PANTHER | 57 | 363 | 307 | 5.7E-149 | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 152 | 176 | 25 | - | – | |
| Pfam | 154 | 237 | 84 | 4.2E-19 | ||
| ProSitePatterns | 163 | 172 | 10 | - | ||
| Phobius | 177 | 182 | 6 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 183 | 207 | 25 | - | – | |
| Phobius | 208 | 226 | 19 | - | – | |
| Phobius | 227 | 245 | 19 | - | – | |
| Phobius | 246 | 265 | 20 | - | – | |
| Phobius | 266 | 290 | 25 | - | – | |
| TMHMM | 270 | 292 | 23 | - | – | |
| Pfam | 282 | 355 | 74 | 1.5E-21 | ||
| Phobius | 291 | 309 | 19 | - | – | |
| Phobius | 310 | 330 | 21 | - | – | |
| TMHMM | 312 | 334 | 23 | - | – | |
| Phobius | 331 | 341 | 11 | - | – | |
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 342 | 363 | 22 | - | – | |
| Phobius | 364 | 364 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .