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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0437700 |
| Transcript ID | LotjaGi2g1v0437700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Intracellular protein transporter USO1-like protein; TAIR: AT5G41620.1 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|A0A0L9T9T0|A0A0L9T9T0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0437700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93426768..93430548) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAGGTGTTTGATTTGATGAGAGAGAAGAAAAGAAAAGAAAGCAAAAGCCATAAATAAAATAAAACGAGCTGAGAGAT GAAAAGTGGAGAACGGGAAGCGGAAAAGGAGGAAAATTTGGGAGAAAAGTTGAAGAGGAGAGGAATATTGGTAGGGAAAA GCAAACCCCTTTCAACACCAACGACTTCTTGGGTTTTGGATACCATCATTGCGGCTGAGGAGGACCACCACCACCCTAAC GTCTCTGCTCGGAAGCTAGCTGCGGCTCTCTGGGAATTCCACCAATACTTTCCAATGCATCGTTCCGCCAGTAACGGTGG TGCTGCTGCTGCTGGTGGTGATCCTAGACTCCGCCGCCACCATTACATCCTTAACAAAGACAAGGCTCCTGACATCACTG ATTTCTTAGCTGATGCTTCTCCCAGTTCCCCTGATCAGGTAACCCTTTCTTCCAAAGTAACTATGAGTTTGATTGATTAG CTTACTTTTTATTTAATTTAATTTATTTATTGCTTATTCTTTGTAATTTTGGTTGATACTTGATGTTGATCTGGTGACTG GTGCCTTTATGTATGTATAATAGGTTGACAAGTTATAATTCTTTTCTTAGCAATATCTAAGATGATTTGTCTTCTTATTC CTGAAATTTTGCACCAACATCAGCCATTTCTATTTGTCTGTATCTCAAGGTCATATTGAAGCTAACTTGGGTAAAAATTG TTATGCGTCATTGTTTTGTATTTTTGTCCATCCAGAGTATGTCTTTGCCGTCATCTTTCAATTTGACCCGTAATTGCACT TTTTCCTAGTTTTATGTTACTAATTTCTTATGCAAATTCCAAGCAAGATTTGGATAGGCTCTCAGAGTACAAATTTCCAT ATCTTCCATTGTAATGCCCTAGTGTACTATTTTTTGCCATATTACTTTTGAGTTTTGAAGATATAGTATTGCTTATATGA GCAGTGAGACATGTTTAGATAAGTAAGTGAACGAACTCGTGCACTAACTTATGCATGAAATGGAGGCAGTAGTTCTCATT GACATTTTCAACCATTCTGATAGAGACTGATCGGATATTCATTTAAACTGATATTTCTCAGCTCTTTAATCAGCCTGCTA GTGCCACCAATTTGAAGAGGCATATTGCAGCCTCACTCATGCAGCATCGTCGGGCAATGGAGAGAAATAACCATGCACTG CAACCTGTATCGCCGGCAAGTTATGGTAGTTCCATGGAGGTAAGCATCAATCCTGCCCCCCAACCCCAATTCCAACATTC CAACACTTCTCGAACAAAAATATTGAAAGGTGTTTGGAATTTTTCTTCTTCCTTGCCTGATGTATGATTCTGGCGTCTTA TTCTGACAAACATGGTTCTCAGGTTGTCACAATTTCAAAGTAAAGACTAGTAGTTTCACAGTAGTGATTTAATTGTATCA TGGAAGAAATAAAAATGATTATCGGTATGCAATACCCTTATACTAAGGAATTTGGTCAACAAAACATAATGATACAACAT ACCAATAACATAGTTTACTAAATCATGAACTTTGTTTAGAGTAGTCGATGTGTTTGTGGATTTGTTTTCAGAATGAGTTT CCTCATAAGTTCAAGTCTTGTTGTAGATTAGTACAAGAACTACCTTCTTGTGCATGATAGTGAGTACTGATATATTTAGT GCTTGTACTTTTTCACAGTTCATTGTTTGATATCTACACAGGATCAGATCATATATTTTACTTATTTTACGTTAGAAGCA TGGTTAATATTGGATCAATATGCAATACTTGATTGCATTTTGTGCATGCCCTTCTTGGGTTGCAGATGACACCTTACAAC CCTGCATCCACTCCTACTAGTTCTGTGGACTTCAAGGGAAGGATTGGGGAGCCACATTATAGTCTCAAGACATCTACAGA ACTCTTAAAAGTGTTAAACAGAATATGGAGCTTGGAAGAACAGCATGCTTCTAACATTTCGTTGATAAAAGCGTTAAAAG CAGAGCTAGATCATACACGTATCAGGGTCAAAGAGTTGCTTCGAGATCGACAGGCAGATAGACAAGAGCTTGATGACCTG GTGAAGCAAATTGCTGAGGATAAGTTGGTTAGGAAGAGTAAGGAACAGGATCGACTTCATTCTGCTGTTCAATCAGTGAG GGCTGAACTTGAGGATGAGAGGAAATTAAGAAAACGGTCAGAGAGCATACACAGGAAACTAGCTCGGGAGCTTTCTGAGG TCAAGTCTTCTCTCACCAGTGCTTTGAAGGACTTGGAGCAAGAGAGAACAAGAAGAACAACATTGGAGGACCTCTGCGAC GAATTTGCTAGGGGAATAAATGAATGCGAACAGGAAATGCATGCTTTGAAACAAAAATCTGATAAAGATTGGGTTCAAAG GGGTGATAACGATCGCTTGATCCTCCACATATCTGAATCATGGCTGGATGAACGTACGCAGATGCAACTGGAAGCAGCCC AGAATGGTTTTATGGATAACAAGTCCATAGTCGATAAACTAAGCCTTGAAATAGAGACTTTCCTTAAAGCTAAACAACAA AGTAGGAATAGAGAAAATCTGGTGGTGAGGGATCGCCGGCATTCCTTGGAATCTGTCCCGTTGAATGATGCTGTCAGTGC ACCACAGGATGTGGGTGATGATGATTCTGTGGATAGCGATTCACATTGTTTCGAGTTGAACAAGTCAAGCAACAAGGCAT CTAAAGTACATGAAGAAGAGTCTGTGGACAAAAAATTTGATGACCGATTGAAAACCAATCACACCAAGAAAAAACCCATG CCACGAGATGGGTTAAAAAATCAGATTCCATCTAGCTTGCAAGTGAAGTTTGAAGAACAGATGGCTTGGGCCTTGTCATC TAGTTCAAATAAGAAGTCCCAGTCAATTGATGCAGCACAAGGAAAGACCACAGATACAAGGCCAGTTGAAGGAACTATAA CGGAAAACCATGAAATCATAGAGGTTAGCGAACATGGAAGTTTTGAAAGAAAAAATAACAGTGACTTGCACAGCTCCAGT AAAAACCACATCATTGATAATCTTATCAGAGGTCAACTTTTGGCATCAGATGGTGGTAACATGCATGGTGAAATTAGTAA TTATAGTGAGGCTTCATGCAGCAATGCTGGATGGAGGAATCAGGCTAGCCCAGTGAGGCAGTGGATGGCAAGTCATGACA TATCAGAGGCTTCCAAAGTTCCTTCAGGATCAGGATCAAAGGAGAATAATAATACTTTGAAAGCAAAGCTGCTGGAAGCA AGGTCCAAGGGGCAGAGATCGCGTTTGAAAGCCTTGAAGGGGTCCTTTTAGAGGCTATTTGCTGTAAATGAAATCGGGTA ATATTATGATTGGATATCCGTTGCTACCAGCGTAAATGAATATTTGCACTCACTTCGAACTGAAGAGAACTATTCTTATG AATTAAGATGACAAATTGTTTTGCACTTAATTTATCTAGACACAGCTGCAAATGCTGAGTCACTAAGGTCCCAGCTGCAA ATTTGCATCTCTTTGATGGCTGTCACTACGGTCCCACGTTCTCCACTCTGGTCTCTTCCTTTGTCGTGGAATTTTTGCTT TGTTCATAAATTTCTGTGTATCTGAATCATATTTCTTGTTCGGGTTTTATTCTGTATACTTCTTTAGATTTTGTTATGTC ACGGAGGTAAAGGAATCGAATCGACTTTTAATACATTAGTATGAGCAAACAATACATGGCATCAATTTGTTTGCCGATGC AAACTACGAATCATGATTCAG
CDS sequence (LotjaGi2g1v0437700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAGTGGAGAACGGGAAGCGGAAAAGGAGGAAAATTTGGGAGAAAAGTTGAAGAGGAGAGGAATATTGGTAGGGAA AAGCAAACCCCTTTCAACACCAACGACTTCTTGGGTTTTGGATACCATCATTGCGGCTGAGGAGGACCACCACCACCCTA ACGTCTCTGCTCGGAAGCTAGCTGCGGCTCTCTGGGAATTCCACCAATACTTTCCAATGCATCGTTCCGCCAGTAACGGT GGTGCTGCTGCTGCTGGTGGTGATCCTAGACTCCGCCGCCACCATTACATCCTTAACAAAGACAAGGCTCCTGACATCAC TGATTTCTTAGCTGATGCTTCTCCCAGTTCCCCTGATCAGCCTGCTAGTGCCACCAATTTGAAGAGGCATATTGCAGCCT CACTCATGCAGCATCGTCGGGCAATGGAGAGAAATAACCATGCACTGCAACCTGTATCGCCGGCAAGTTATGGTAGTTCC ATGGAGATGACACCTTACAACCCTGCATCCACTCCTACTAGTTCTGTGGACTTCAAGGGAAGGATTGGGGAGCCACATTA TAGTCTCAAGACATCTACAGAACTCTTAAAAGTGTTAAACAGAATATGGAGCTTGGAAGAACAGCATGCTTCTAACATTT CGTTGATAAAAGCGTTAAAAGCAGAGCTAGATCATACACGTATCAGGGTCAAAGAGTTGCTTCGAGATCGACAGGCAGAT AGACAAGAGCTTGATGACCTGGTGAAGCAAATTGCTGAGGATAAGTTGGTTAGGAAGAGTAAGGAACAGGATCGACTTCA TTCTGCTGTTCAATCAGTGAGGGCTGAACTTGAGGATGAGAGGAAATTAAGAAAACGGTCAGAGAGCATACACAGGAAAC TAGCTCGGGAGCTTTCTGAGGTCAAGTCTTCTCTCACCAGTGCTTTGAAGGACTTGGAGCAAGAGAGAACAAGAAGAACA ACATTGGAGGACCTCTGCGACGAATTTGCTAGGGGAATAAATGAATGCGAACAGGAAATGCATGCTTTGAAACAAAAATC TGATAAAGATTGGGTTCAAAGGGGTGATAACGATCGCTTGATCCTCCACATATCTGAATCATGGCTGGATGAACGTACGC AGATGCAACTGGAAGCAGCCCAGAATGGTTTTATGGATAACAAGTCCATAGTCGATAAACTAAGCCTTGAAATAGAGACT TTCCTTAAAGCTAAACAACAAAGTAGGAATAGAGAAAATCTGGTGGTGAGGGATCGCCGGCATTCCTTGGAATCTGTCCC GTTGAATGATGCTGTCAGTGCACCACAGGATGTGGGTGATGATGATTCTGTGGATAGCGATTCACATTGTTTCGAGTTGA ACAAGTCAAGCAACAAGGCATCTAAAGTACATGAAGAAGAGTCTGTGGACAAAAAATTTGATGACCGATTGAAAACCAAT CACACCAAGAAAAAACCCATGCCACGAGATGGGTTAAAAAATCAGATTCCATCTAGCTTGCAAGTGAAGTTTGAAGAACA GATGGCTTGGGCCTTGTCATCTAGTTCAAATAAGAAGTCCCAGTCAATTGATGCAGCACAAGGAAAGACCACAGATACAA GGCCAGTTGAAGGAACTATAACGGAAAACCATGAAATCATAGAGGTTAGCGAACATGGAAGTTTTGAAAGAAAAAATAAC AGTGACTTGCACAGCTCCAGTAAAAACCACATCATTGATAATCTTATCAGAGGTCAACTTTTGGCATCAGATGGTGGTAA CATGCATGGTGAAATTAGTAATTATAGTGAGGCTTCATGCAGCAATGCTGGATGGAGGAATCAGGCTAGCCCAGTGAGGC AGTGGATGGCAAGTCATGACATATCAGAGGCTTCCAAAGTTCCTTCAGGATCAGGATCAAAGGAGAATAATAATACTTTG AAAGCAAAGCTGCTGGAAGCAAGGTCCAAGGGGCAGAGATCGCGTTTGAAAGCCTTGAAGGGGTCCTTTTAG
Protein sequence (LotjaGi2g1v0437700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSGEREAEKEENLGEKLKRRGILVGKSKPLSTPTTSWVLDTIIAAEEDHHHPNVSARKLAAALWEFHQYFPMHRSASNG GAAAAGGDPRLRRHHYILNKDKAPDITDFLADASPSSPDQPASATNLKRHIAASLMQHRRAMERNNHALQPVSPASYGSS MEMTPYNPASTPTSSVDFKGRIGEPHYSLKTSTELLKVLNRIWSLEEQHASNISLIKALKAELDHTRIRVKELLRDRQAD RQELDDLVKQIAEDKLVRKSKEQDRLHSAVQSVRAELEDERKLRKRSESIHRKLARELSEVKSSLTSALKDLEQERTRRT TLEDLCDEFARGINECEQEMHALKQKSDKDWVQRGDNDRLILHISESWLDERTQMQLEAAQNGFMDNKSIVDKLSLEIET FLKAKQQSRNRENLVVRDRRHSLESVPLNDAVSAPQDVGDDDSVDSDSHCFELNKSSNKASKVHEEESVDKKFDDRLKTN HTKKKPMPRDGLKNQIPSSLQVKFEEQMAWALSSSSNKKSQSIDAAQGKTTDTRPVEGTITENHEIIEVSEHGSFERKNN SDLHSSSKNHIIDNLIRGQLLASDGGNMHGEISNYSEASCSNAGWRNQASPVRQWMASHDISEASKVPSGSGSKENNNTL KAKLLEARSKGQRSRLKALKGSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 662 | 662 | 1.5E-274 | ||
| Coils | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 662 | 662 | 1.5E-274 | – | |
| Coils | 216 | 250 | 35 | - | – | |
| Coils | 295 | 315 | 21 | - | – | |
| Coils | 326 | 346 | 21 | - | – | |
| MobiDBLite | 426 | 494 | 69 | - | – | |
| MobiDBLite | 458 | 490 | 33 | - | – | |
| MobiDBLite | 513 | 535 | 23 | - | – | |
| MobiDBLite | 619 | 663 | 45 | - | – | |
| MobiDBLite | 624 | 643 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0437700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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