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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0437700 |
| Transcript ID | LotjaGi2g1v0437700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Intracellular protein transporter USO1-like protein; TAIR: AT5G41620.1 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|A0A0L9T9T0|A0A0L9T9T0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0437700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93426783..93430685) extracted from Lotus japonicus Gifu genome v1.2.
TTGATGAGAGAGAAGAAAAGAAAAGAAAGCAAAAGCCATAAATAAAATAAAACGAGCTGAGAGATGAAAAGTGGAGAACG GGAAGCGGAAAAGGAGGAAAATTTGGGAGAAAAGTTGAAGAGGAGAGGAATATTGGTAGGGAAAAGCAAACCCCTTTCAA CACCAACGACTTCTTGGGTTTTGGATACCATCATTGCGGCTGAGGAGGACCACCACCACCCTAACGTCTCTGCTCGGAAG CTAGCTGCGGCTCTCTGGGAATTCCACCAATACTTTCCAATGCATCGTTCCGCCAGTAACGGTGGTGCTGCTGCTGCTGG TGGTGATCCTAGACTCCGCCGCCACCATTACATCCTTAACAAAGACAAGGCTCCTGACATCACTGATTTCTTAGCTGATG CTTCTCCCAGTTCCCCTGATCAGGTAACCCTTTCTTCCAAAGTAACTATGAGTTTGATTGATTAGCTTACTTTTTATTTA ATTTAATTTATTTATTGCTTATTCTTTGTAATTTTGGTTGATACTTGATGTTGATCTGGTGACTGGTGCCTTTATGTATG TATAATAGGTTGACAAGTTATAATTCTTTTCTTAGCAATATCTAAGATGATTTGTCTTCTTATTCCTGAAATTTTGCACC AACATCAGCCATTTCTATTTGTCTGTATCTCAAGGTCATATTGAAGCTAACTTGGGTAAAAATTGTTATGCGTCATTGTT TTGTATTTTTGTCCATCCAGAGTATGTCTTTGCCGTCATCTTTCAATTTGACCCGTAATTGCACTTTTTCCTAGTTTTAT GTTACTAATTTCTTATGCAAATTCCAAGCAAGATTTGGATAGGCTCTCAGAGTACAAATTTCCATATCTTCCATTGTAAT GCCCTAGTGTACTATTTTTTGCCATATTACTTTTGAGTTTTGAAGATATAGTATTGCTTATATGAGCAGTGAGACATGTT TAGATAAGTAAGTGAACGAACTCGTGCACTAACTTATGCATGAAATGGAGGCAGTAGTTCTCATTGACATTTTCAACCAT TCTGATAGAGACTGATCGGATATTCATTTAAACTGATATTTCTCAGCTCTTTAATCAGCCTGCTAGTGCCACCAATTTGA AGAGGCATATTGCAGCCTCACTCATGCAGCATCGTCGGGCAATGGAGAGAAATAACCATGCACTGCAACCTGTATCGCCG GCAAGTTATGGTAGTTCCATGGAGGTAAGCATCAATCCTGCCCCCCAACCCCAATTCCAACATTCCAACACTTCTCGAAC AAAAATATTGAAAGGTGTTTGGAATTTTTCTTCTTCCTTGCCTGATGTATGATTCTGGCGTCTTATTCTGACAAACATGG TTCTCAGGTTGTCACAATTTCAAAGTAAAGACTAGTAGTTTCACAGTAGTGATTTAATTGTATCATGGAAGAAATAAAAA TGATTATCGGTATGCAATACCCTTATACTAAGGAATTTGGTCAACAAAACATAATGATACAACATACCAATAACATAGTT TACTAAATCATGAACTTTGTTTAGAGTAGTCGATGTGTTTGTGGATTTGTTTTCAGAATGAGTTTCCTCATAAGTTCAAG TCTTGTTGTAGATTAGTACAAGAACTACCTTCTTGTGCATGATAGTGAGTACTGATATATTTAGTGCTTGTACTTTTTCA CAGTTCATTGTTTGATATCTACACAGGATCAGATCATATATTTTACTTATTTTACGTTAGAAGCATGGTTAATATTGGAT CAATATGCAATACTTGATTGCATTTTGTGCATGCCCTTCTTGGGTTGCAGATGACACCTTACAACCCTGCATCCACTCCT ACTAGTTCTGTGGACTTCAAGGGAAGGATTGGGGAGCCACATTATAGTCTCAAGACATCTACAGAACTCTTAAAAGTGTT AAACAGAATATGGAGCTTGGAAGAACAGCATGCTTCTAACATTTCGTTGATAAAAGCGTTAAAAGCAGAGCTAGATCATA CACGTATCAGGGTCAAAGAGTTGCTTCGAGATCGACAGGCAGATAGACAAGAGCTTGATGACCTGGTGAAGCAAATTGCT GAGGATAAGTTGGTTAGGAAGAGTAAGGAACAGGATCGACTTCATTCTGCTGTTCAATCAGTGAGGGCTGAACTTGAGGA TGAGAGGAAATTAAGAAAACGGTCAGAGAGCATACACAGGAAACTAGCTCGGGAGCTTTCTGAGGTCAAGTCTTCTCTCA CCAGTGCTTTGAAGGACTTGGAGCAAGAGAGAACAAGAAGAACAACATTGGAGGACCTCTGCGACGAATTTGCTAGGGGA ATAAATGAATGCGAACAGGAAATGCATGCTTTGAAACAAAAATCTGATAAAGATTGGGTTCAAAGGGGTGATAACGATCG CTTGATCCTCCACATATCTGAATCATGGCTGGATGAACGTACGCAGATGCAACTGGAAGCAGCCCAGAATGGTTTTATGG ATAACAAGTCCATAGTCGATAAACTAAGCCTTGAAATAGAGACTTTCCTTAAAGCTAAACAACAAAGTAGGAATAGAGAA AATCTGGTGGTGAGGGATCGCCGGCATTCCTTGGAATCTGTCCCGTTGAATGATGCTGTCAGTGCACCACAGGATGTGGG TGATGATGATTCTGTGGATAGCGATTCACATTGTTTCGAGTTGAACAAGTCAAGCAACAAGGCATCTAAAGTACATGAAG AAGAGTCTGTGGACAAAAAATTTGATGACCGATTGAAAACCAATCACACCAAGAAAAAACCCATGCCACGAGATGGGTTA AAAAATCAGATTCCATCTAGCTTGCAAGTGAAGTTTGAAGAACAGATGGCTTGGGCCTTGTCATCTAGTTCAAATAAGAA GTCCCAGTCAATTGATGCAGCACAAGGAAAGACCACAGATACAAGGCCAGTTGAAGGAACTATAACGGAAAACCATGAAA TCATAGAGGTTAGCGAACATGGAAGTTTTGAAAGAAAAAATAACAGTGACTTGCACAGCTCCAGTAAAAACCACATCATT GATAATCTTATCAGAGGTCAACTTTTGGCATCAGATGGTGGTAACATGCATGGTGAAATTAGTAATTATAGTGAGGCTTC ATGCAGCAATGCTGGATGGAGGAATCAGGCTAGCCCAGTGAGGCAGTGGATGGCAAGTCATGACATATCAGAGGCTTCCA AAGTTCCTTCAGGATCAGGATCAAAGGAGAATAATAATACTTTGAAAGCAAAGCTGCTGGAAGCAAGGTCCAAGGGGCAG AGATCGCGTTTGAAAGCCTTGAAGGGGTCCTTTTAGAGGCTATTTGCTGTAAATGAAATCGGGTAATATTATGATTGGAT ATCCGTTGCTACCAGCGTAAATGAATATTTGCACTCACTTCGAACTGAAGAGAACTATTCTTATGAATTAAGATGACAAA TTGTTTTGCACTTAATTTATCTAGACACAGCTGCAAATGCTGAGTCACTAAGGTCCCAGCTGCAAATTTGCATCTCTTTG ATGGCTGTCACTACGGTCCCACGTTCTCCACTCTGGTCTCTTCCTTTGTCGTGGAATTTTTGCTTTGTTCATAAATTTCT GTGTATCTGAATCATATTTCTTGTTCGGGTTTTATTCTGTATACTTCTTTAGATTTTGTTATGTCACGGAGGTAAAGGAA TCGAATCGACTTTTAATACATTAGTATGAGCAAACAATACATGGCATCAATTTGTTTGCCGATGCAAACTACGAATCATG ATTCAGGAAGATGCAGAATCCATATTTCAGGAATCACCATAATTGACCCGATGAAATTATGAATATGAATACCATACGAA AAGAGAGGGCTATGACTAGAGTGAATTAGCAATTGGGTTATGCAAGGTGCATGAGCCATTAGC
CDS sequence (LotjaGi2g1v0437700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAGTGGAGAACGGGAAGCGGAAAAGGAGGAAAATTTGGGAGAAAAGTTGAAGAGGAGAGGAATATTGGTAGGGAA AAGCAAACCCCTTTCAACACCAACGACTTCTTGGGTTTTGGATACCATCATTGCGGCTGAGGAGGACCACCACCACCCTA ACGTCTCTGCTCGGAAGCTAGCTGCGGCTCTCTGGGAATTCCACCAATACTTTCCAATGCATCGTTCCGCCAGTAACGGT GGTGCTGCTGCTGCTGGTGGTGATCCTAGACTCCGCCGCCACCATTACATCCTTAACAAAGACAAGGCTCCTGACATCAC TGATTTCTTAGCTGATGCTTCTCCCAGTTCCCCTGATCAGCTCTTTAATCAGCCTGCTAGTGCCACCAATTTGAAGAGGC ATATTGCAGCCTCACTCATGCAGCATCGTCGGGCAATGGAGAGAAATAACCATGCACTGCAACCTGTATCGCCGGCAAGT TATGGTAGTTCCATGGAGATGACACCTTACAACCCTGCATCCACTCCTACTAGTTCTGTGGACTTCAAGGGAAGGATTGG GGAGCCACATTATAGTCTCAAGACATCTACAGAACTCTTAAAAGTGTTAAACAGAATATGGAGCTTGGAAGAACAGCATG CTTCTAACATTTCGTTGATAAAAGCGTTAAAAGCAGAGCTAGATCATACACGTATCAGGGTCAAAGAGTTGCTTCGAGAT CGACAGGCAGATAGACAAGAGCTTGATGACCTGGTGAAGCAAATTGCTGAGGATAAGTTGGTTAGGAAGAGTAAGGAACA GGATCGACTTCATTCTGCTGTTCAATCAGTGAGGGCTGAACTTGAGGATGAGAGGAAATTAAGAAAACGGTCAGAGAGCA TACACAGGAAACTAGCTCGGGAGCTTTCTGAGGTCAAGTCTTCTCTCACCAGTGCTTTGAAGGACTTGGAGCAAGAGAGA ACAAGAAGAACAACATTGGAGGACCTCTGCGACGAATTTGCTAGGGGAATAAATGAATGCGAACAGGAAATGCATGCTTT GAAACAAAAATCTGATAAAGATTGGGTTCAAAGGGGTGATAACGATCGCTTGATCCTCCACATATCTGAATCATGGCTGG ATGAACGTACGCAGATGCAACTGGAAGCAGCCCAGAATGGTTTTATGGATAACAAGTCCATAGTCGATAAACTAAGCCTT GAAATAGAGACTTTCCTTAAAGCTAAACAACAAAGTAGGAATAGAGAAAATCTGGTGGTGAGGGATCGCCGGCATTCCTT GGAATCTGTCCCGTTGAATGATGCTGTCAGTGCACCACAGGATGTGGGTGATGATGATTCTGTGGATAGCGATTCACATT GTTTCGAGTTGAACAAGTCAAGCAACAAGGCATCTAAAGTACATGAAGAAGAGTCTGTGGACAAAAAATTTGATGACCGA TTGAAAACCAATCACACCAAGAAAAAACCCATGCCACGAGATGGGTTAAAAAATCAGATTCCATCTAGCTTGCAAGTGAA GTTTGAAGAACAGATGGCTTGGGCCTTGTCATCTAGTTCAAATAAGAAGTCCCAGTCAATTGATGCAGCACAAGGAAAGA CCACAGATACAAGGCCAGTTGAAGGAACTATAACGGAAAACCATGAAATCATAGAGGTTAGCGAACATGGAAGTTTTGAA AGAAAAAATAACAGTGACTTGCACAGCTCCAGTAAAAACCACATCATTGATAATCTTATCAGAGGTCAACTTTTGGCATC AGATGGTGGTAACATGCATGGTGAAATTAGTAATTATAGTGAGGCTTCATGCAGCAATGCTGGATGGAGGAATCAGGCTA GCCCAGTGAGGCAGTGGATGGCAAGTCATGACATATCAGAGGCTTCCAAAGTTCCTTCAGGATCAGGATCAAAGGAGAAT AATAATACTTTGAAAGCAAAGCTGCTGGAAGCAAGGTCCAAGGGGCAGAGATCGCGTTTGAAAGCCTTGAAGGGGTCCTT TTAG
Protein sequence (LotjaGi2g1v0437700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSGEREAEKEENLGEKLKRRGILVGKSKPLSTPTTSWVLDTIIAAEEDHHHPNVSARKLAAALWEFHQYFPMHRSASNG GAAAAGGDPRLRRHHYILNKDKAPDITDFLADASPSSPDQLFNQPASATNLKRHIAASLMQHRRAMERNNHALQPVSPAS YGSSMEMTPYNPASTPTSSVDFKGRIGEPHYSLKTSTELLKVLNRIWSLEEQHASNISLIKALKAELDHTRIRVKELLRD RQADRQELDDLVKQIAEDKLVRKSKEQDRLHSAVQSVRAELEDERKLRKRSESIHRKLARELSEVKSSLTSALKDLEQER TRRTTLEDLCDEFARGINECEQEMHALKQKSDKDWVQRGDNDRLILHISESWLDERTQMQLEAAQNGFMDNKSIVDKLSL EIETFLKAKQQSRNRENLVVRDRRHSLESVPLNDAVSAPQDVGDDDSVDSDSHCFELNKSSNKASKVHEEESVDKKFDDR LKTNHTKKKPMPRDGLKNQIPSSLQVKFEEQMAWALSSSSNKKSQSIDAAQGKTTDTRPVEGTITENHEIIEVSEHGSFE RKNNSDLHSSSKNHIIDNLIRGQLLASDGGNMHGEISNYSEASCSNAGWRNQASPVRQWMASHDISEASKVPSGSGSKEN NNTLKAKLLEARSKGQRSRLKALKGSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 666 | 666 | 1.4E-272 | ||
| Coils | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 666 | 666 | 1.4E-272 | – | |
| Coils | 220 | 254 | 35 | - | – | |
| Coils | 299 | 319 | 21 | - | – | |
| Coils | 330 | 350 | 21 | - | – | |
| MobiDBLite | 430 | 498 | 69 | - | – | |
| MobiDBLite | 462 | 494 | 33 | - | – | |
| MobiDBLite | 517 | 539 | 23 | - | – | |
| MobiDBLite | 623 | 667 | 45 | - | – | |
| MobiDBLite | 628 | 647 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0437700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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