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LotjaGi2g1v0437900.3

Overview

Field Value
Gene ID LotjaGi2g1v0437900
Transcript ID LotjaGi2g1v0437900.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description V-type proton ATPase subunit E; TAIR: AT4G11150.1 vacuolar ATP synthase subunit E1; Swiss-Prot: sp|Q9SWE7|VATE_CITLI V-type proton ATPase subunit E; TrEMBL-Plants: tr|I3S5S1|I3S5S1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0437900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:93441069..93446442) extracted from Lotus japonicus Gifu genome v1.2.

CATTTTTGAATTTCTTTCTTTAAAAATCATTTTCAATTTTTTGAATAATTATCAAACATTTCCAACATATCTGGAATAAA TTTCTCACTTCTCCAACAAATTTCAAAAATCATATCTCGAACACAATTTCTCACTTCTCCAACCTCTCTACGCAAACTAG ATCTGGAGGTACCACAGACCAACAGATCTGAAAAAATACTCACTTTTTCAAGATGCAGTGGAAAAATGCAGATATAGAAA AATACTTAGTTTCAGGTGATTTGGCCATGCCTTCTTCTCTACTCTTATTTCTCTTTGTTTTCTCCTATCAACATAATGAA CAACCCAGATCGAACCCACCGCCACCGCCCTCATCCCCATCGCAGAAACCTCCCTCCGCCGCAGAAACCCACTTCCACCG CAACCCTAGCCACATCCAAAAACCCAGCTCCATCTCCACCCTAACCCCCGCAGAAACCATTGAGCCATCATCCTCTTCAC ACACTCTGATCTAGGTTCTGTAGTGGTGAGGAAAAAGGTTTGATTGGAACTTCAAACCAAAAGAGGAAAAGATTGAAGCT TTTCAATGGGTTTGGAAATCTCTACTCAGATCTGTGGGTTCGGAAATCTCATTAAGGTAGAGAGAAATGGGTTTCGGTGG GGGTGAGGGATGGACTTTGCAGTGGGGGATTGGGTTGTGATGGAAGGATTGGTGAAGATGATGAAGAAGATGAAGAACGA TGGTGATGGCTGGTAGTTAAGATTTTTTGTGTTTTATTTAATTTAGCTTTTAGTTAATTTGTTATTTCAATTTAATTTAA TAATTTTTCAGCTTAAAAAAAGGAAATTGGTAACGTCTGTTAAGTTTTTTTTAACGAAAGGACTAATATGAATGACGTTT GCCACATTTAAGGACTGCGAGATGAATAAAATTCATTCAGGGACGAATGTGAAGTCGGTGGACACTTTCGAGGACCAAAG TGACCATTTACCCCTTTCTTTTTTTACAGGAAATTACCCCTTTTTCTTTTGCTGTTTACATTGATTTAACAGTTTATACA ATCCCCGATTTTTTGAAAAGGTTAAAAAGATGAGGGTATATTCATTAGGCTATCGTGTGGAAGGTGCATAATAAAAAGGT GGTATCCTGTGATCTCATATTTCTCAATTCTCATCCACACAAACCGCCATCGACGAAGGCCTCGCTCTCATCTCATAATC ATATCACCTCCGCGGAAGCAGTTTCGCTTCCCTTCCTCCTTCCTCGATCTTCTCCGATTCCGAAGCCACCGTCAAAATGA ACGACACAGATGTCTCCCAGCAAATCCAGCAGATGGTCAGGTTCATCCGCCAGGAAGCCGAAGAGAAAGCCAACGAGATC TCTGTCTCCGCCGAAGAAGTACCGTACCACTTTTCACTCCTCTCAATTTTCTTCCACTTCCACTTCTCCATCCCGATCAA CCTCTCAATTTCCTCATTCAAACCGCTTTTTAGTTCAGATCATCATTGATTCTTACATAATCACGTTTGTTTTGGTTGAT TCTTCATCGATTTGATACTTTTTGTTCACTGTTTTCGTGTAGGAATTCAACATCGAGAAGTTGCAGTTGGTTGAAGTCGA CAAGAAGAAGATCCGCCAAGAGTACGAGCGCAAGGAGAAGCAAGTTGATGTTCGCAAAAAGATGTAACTACTCTTGCTCA CTCTTATGTCTTCTATATATTTAATTTTTCTTCCACCAGTAAATTCGAAATATTCACATGTCTATTTGATAGTTTTACCA TGCGCAAATAGTTGAGAGTGATGATTTCTCACTGTTATTCTCAATTTTATGCATTCATATAGGTATTGATTAGTGAAGAA AGATTAACAATGGTTGTTATTACTAGTAAAGCTTGATTTATTGTCCAAGGTTATTGGATCCCTTTGGTACTTTTCGTATA GCGCAAAACTTAATTAGCCGTATTATTTACAATTCATTTGAAAACTGTTGGGATATGTCATGTATGGTGATTGTTGAATT ACTTACAATCGACGTTATTGCCAAAGTATTATTATGAACTGTTTACAAAACATCATCATGGAGAGTGAATCTACTCTTGC GGTGGGTTGGGTAAATTCAAAACATGAGATCGTGAAAGTTGCTCAATGAGTTGAATCAAATTGATTCATTATTAGGAGAG GTGTGAATTGCTTGGGAGTTAAACATGCTTATAGGGAAACCAACACTATTGCGGACTATTTAGTTAAGCAAGGTTGCAAA GTTGTCGATCCTCTATTGTATTGCATATTCTATTGTATAACTAAGGGACCTACTTGAGAAGGATGTTGTCATGCCTTATC TTTAAGAACTATGATAATATTATGATTTATGATTTATCATTCAAAAAAGTAATATTATTATAAATGGTGAAAATCCTTTT TTTATTTATTAATAAGTGAATTTGATGGCTCAATGGAGGCTTGATTTGTTTCTTGCAGTCAAATGACTAGTATTTTCATT TTCCTTACTTGAAAAAATGGTGGTAGTTCTGATAGTTTGAATTTCACGTCACAATTGTATGTTTGCAGTGAGTACTCTAT GCAGTTGAATGCTTCTCGGATTAAAGTTCTGCAAGCTCAAGATGATGTGGTTAATAAAATGAAAGAATCTGCAACCAAGG AACTTTTGAATGCGGGCCGTGATCATCATGTGTACAAAAACCTTTTAAAAGATCTCATTGTTCAGGTCAGATAAAGTTTC ATGTTGTACTCTACTCGGAATTTTTCTACGTATCTTGGAAAGATTATTTCTCACATTTTTTATGTTTGAGTAGTAACATG CATGTAGGCAGTCAATATTAGTTGTTATTTTTTTGTTATCATGCCTAATTCTGTATAATTTGTGATTGTGATATTGTATG AAACTATGGATAACTATTAAGTTCCTGAGAAGTTTTTTGTAAGTATCTGGTAACACAGATGGTATTGTTTCAAATCATAA CTAGTTGCTCTCATGGCACTACCCGAAGTCCTGGCCATGGTGCAGTTGATGCCATGGGTCCAGTCCCTTCTCATCTCATC CCATTTTTCTGAAGTCTTGGAATAGAAAATAAGGATTGTATTTGACAATTCACAGCTCCACACAAACGTACAAAAAGAAA TAAATAAAGAAAAGACCAGACAAATCTGATCTTGTTTTATGAACTACTTACAATGTGTATGTGTCTTAGAAAATAATATA AGTATTGTATTTGGCAGGGTTTGCTGAGGCTCAAAGAGCCTGCTGTCTTGTTGCGATGCCGGAAAGATGACCTGCAGTTG GTAGAGGCTGTGTTGGATTCTGCTGCAGAGGAGTATGCTGGCAAGGCAAATGTTAATCAGCCAGAGATAATTGTTGACCA CAACATCTATCTTCCATCTGCCCCCAGTCATTATGAGTCTCATGAGCCATACTGGTATTGTTAATTTTATAATTTAGTCC TGACTAACTGACTGTTTTCAGCTACCTGCTAATGCTTAAAAGTTAAAACTATCTACTATGTGGGATTTTGGGGAAGGGGC TAGGAATTTCTGGCTCTGTTAGTCAGGGCCTCGCTTCTAATTCTTACCCATGCTCTCATGTCTAATAGTATTTACTTTCT AGCCACTCTGATATTGAGGATTCAGTTTCAACATACTTGATTATATATTGTTATTTTTTCAGCTCTGGAGGGGTGGTGTT GGCTTCTCGAGATGGAAAGATTGTGTGTGAAAATACACTTGATGCCCGTTTGGATGTTGTGTTTCGTAAAAAACTTCCAG AGGTAAATTTTTGCTCTGTAATAGACTTTTTAGTTCACTAGCACCTTGCATTGTCCTGCTCTTTGTTGTTTCATATTTAT GCTGCTTAATTTTTTTGTGTTGAGATTTAAACTAGAAAGTTAGTTTTGGTCAAAGTCATTATTCTTCTTTTATAATGGTC AATGTTATGAAATACAGGACTTTGATATTCAAATAAAATACTTTAGATGTACTATGGCCCCGTTTGGAAACACAACTTAA TTAAGCGATTATCACCATAAGCGCTTATGACATAAGCGCTTATTCATAAGCTATTTTAAATTTTTTATTGAAATGAATTG AAAATAAGTAAGCATAAGCCCTTTTTCATAAGCTATCCTGAATAGCTTATGGAAATAAGCTCAAAACAGCTTATGGTAGG CCATAAGCTGTTTGCATAAGCTCTCCCAAACACTGGCATTAGAGCTTATGCTATCACATAAGCTCAAATAAGCTCTTCCA AACGGGGCCTATTATACACACTGTGAGGGACAACTGGAAAATGCAAATGGAATAAGGGTCTATAAAAGGGACTGGGAGGT ATATTAGGATTAAGGTTTGCTGTTGAACAAGGAAAAGAGACGGAGTTCTTCAAACAAAACTCTGAAATGCCTGCGCTTTA TTCTTCTTGGGTAATGCCTGCGCTTTATTCCAAACAAGACTTTGTGTATATTTGACAATTCTTCTACAAATAATTCTAAA ATTAAAATCAATTATGGGGAAAAGCTTTTGTGAGTAGCTTTTGAATGCTAGAATTGATTCTAAGAGAAGAGAAGCTGATC CAAACATGTTAAAAGTATATCAAATATCCTTGTCGCTGATTATGACATACACTACGCATCTCCTTTCTAAATAGAGGCCT GACATTACCATTATTGGTCAACTTTCTTTATCTTACTGATTTTGTAAACTGCAAAATCTGGTGGACATTTTAGTGTCATT TTTCTCAACTTAGTTTTGGAACTATTCTGTAAGTATGTGTCAGTAGTGTATTTAGTTGATATTTTAATTTTCAGTAATTT CATCTCAGCAATTATTAATAGCTTAGATCCCACCCCAAAAGAAAAATTGGTTAAGCATGTAGAACGTGACTAAATTATAG GGTTGTTCGTTACTGCAGATCCGCAAGCAGCTCTTTGGACAAGTTGCTGTTTGAAGTCTTTGGTTGTATTGTTTCCTTGC CCCTAGAATATTTATATTTTTCTGCAGAGATTGTCTATGACCGGAAGATATGTCGTGCCATTGCTCCTGTAATCTCAGTA TTGTTATCCTTTTGTTACTTCAATTTTTTGTGGCATTCGCTTCACATCGTATTTGTTAGGGCATGCGATGTCGTAGAAGT TATAGTTATAATAAGTGCTCGCTACAATTTGTTGATGTCTTTAGCTTCTTTGGTATTTAAGTGGCAGATATATTGGACAT TGCTGTTGCGTTGTGGTAGAACAACAACTGTTATCTTCTGGTGTTCATCGTGCAAATAAATAAAGCTCATGAAGAATTAG TGAAATTTGCTATGGATTAAGCTTAATATATCTCTATTCATCATAAATTTCTTGTAGGTGGGTTAAACTACCGAGATTAC ATTCTGCACTTCTT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0437900.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACGACACAGATGTCTCCCAGCAAATCCAGCAGATGGTCAGGTTCATCCGCCAGGAAGCCGAAGAGAAAGCCAACGA GATCTCTGTCTCCGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGTTGGTTGAAGTCGACAAGAAGAAGATCCGCCAAG AGTACGAGCGCAAGGAGAAGCAAGTTGATGTTCGCAAAAAGATTGAGTACTCTATGCAGTTGAATGCTTCTCGGATTAAA GTTCTGCAAGCTCAAGATGATGTGGTTAATAAAATGAAAGAATCTGCAACCAAGGAACTTTTGAATGCGGGCCGTGATCA TCATGTGTACAAAAACCTTTTAAAAGATCTCATTGTTCAGGGTTTGCTGAGGCTCAAAGAGCCTGCTGTCTTGTTGCGAT GCCGGAAAGATGACCTGCAGTTGGTAGAGGCTGTGTTGGATTCTGCTGCAGAGGAGTATGCTGGCAAGGCAAATGTTAAT CAGCCAGAGATAATTGTTGACCACAACATCTATCTTCCATCTGCCCCCAGTCATTATGAGTCTCATGAGCCATACTGCTC TGGAGGGGTGGTGTTGGCTTCTCGAGATGGAAAGATTGTGTGTGAAAATACACTTGATGCCCGTTTGGATGTTGTGTTTC GTAAAAAACTTCCAGAGATCCGCAAGCAGCTCTTTGGACAAGTTGCTGTTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0437900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNDTDVSQQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEVDKKKIRQEYERKEKQVDVRKKIEYSMQLNASRIK VLQAQDDVVNKMKESATKELLNAGRDHHVYKNLLKDLIVQGLLRLKEPAVLLRCRKDDLQLVEAVLDSAAEEYAGKANVN QPEIIVDHNIYLPSAPSHYESHEPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVAV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45715
1 229 229 2.0E-127 –
PANTHER
PTHR45715:SF11
1 229 229 2.0E-127 –
Hamap
MF_00311
8 226 219 12.965
IPR002842
Pfam
PF01991
16 225 210 2.9E-72
IPR002842
Coils
Coil
41 61 21 - –
SUPERFAMILY
SSF160527
87 226 140 1.57E-30 –
Gene3D
G3DSA:3.30.2320.30
91 229 139 4.0E-44
IPR038495

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0033178
Cellular component Proton-transporting two-sector ATPase complex, catalytic domain A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.
Subterm of
Part of
GO:0046961
Molecular function Proton-transporting ATPase activity, rotational mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
Subterm of
GO:1902600
Biological process Proton transmembrane transport The directed movement of a proton across a membrane.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0437900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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