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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0447400 |
| Transcript ID | LotjaGi2g1v0447400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT2G40935.1 PLAC8 family protein; Swiss-Prot: sp|Q8S8T8|PCR10_ARATH Protein PLANT CADMIUM RESISTANCE 10; TrEMBL-Plants: tr|I3SQ97|I3SQ97_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0447400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94153780..94156636) extracted from Lotus japonicus Gifu genome v1.2.
TTTATCAAAAAATAAAACCCTAAATTATCTATTTACGATAGAAGCCTAAAATAGGAAAATGAACAACAGCAAGCAACAAC CTTGGAAGTTGGAAGCTGATCTCAGTCTCAGTCCTTCGTTCCCGTGATCGTCGCTGTTCCTCAGTATCTCAATCTATCCT TCCAAGGTAATTAACATCATTTCCTTTCTCCTTTATTCTTTCTCTGATTACCTCTGTATGCAACTAAGAATGAAGCTTGG GTAAGATCTCATTTCACAGAATTCAATGGTTTCTGTTAATCATAATCAAAATTCGACTTGGAATTTGAGTTCATCGTTTA TCTTTTAAAAAATTATAATTAAATTTGAATGTTAGCTGAACCAGGTAAATTTTGATTTTAATCGAAATTGGAGATTCATG GGTCTCATGCTATTCTGTCCAGTTTATGTTTGATGAAATGCTTTTAGAGGAAGTAGTTTTTAATCAATTGCTCCTTGCAG AAGCAATATGAAGAACCAACATGGTTATGTGCCACCTGCTTACATTCCTTTGGGGCAATCAGATTCAGTGGCATTGGATG TTTCTCCACCTCAGGGCAATGAGCAACATAGGACCAGCAATGTATCAAACCAAATCCAGCCTCAGTGGTCTTCTGGAATC TGTGCTTGTTTCGATGATATGCAGAGCTGTATGCTACTTCCTTACCCTGTCACCCTCATTTAATACAAAGGTGCCCCTTG ACTATGTTTCAGGAAATTTGCTTGTATCCCTGTTCTTTGAGTTTTAAAATCTGAAAGCAGTATTTTGCACAACACTCAGA TGCTTTCTTTTTCTATCAGTATTGGATGGTTTTTAAGTTATGTTTGTACGTATGTTTTTAGGTTATGCTTGTAGGCATGT TAGTTGAACTACAACCCTATCAATGTTTAAAATTTTGACGAAATGCTGAAAACGTAGGCAAAAGGACGTATCAGGGAGTT TGAATAATACATTAATAAGGATATTATCATAATACTTTAATTCATGCATATCTTCTTCTTTTTATGTTTGGTTAATTCTC AAAGATAGAAGGTTAAGACTATTGTTGGTTCAAACATTTAAATTTTGTTTGGTTCAATCTTTGCAGGTTGCATAGGTTGT CTTTGTCCTTGCTTTCTCTTTGGGAAGAATGCAGAATTTCTCGGTTCTGGAACTTTCTTGGGATCATGTGTTACCCATTT TGCATTGTGGGGTCTGGTTAATGTAGGCTGCTGCTTTTTAACTGATGGCTTGCTTTTGGGATTACCTGGATGCCTTGTTT CAACTTATGCTTGTGGCTACCGCAGGACCTTAAGGTCAAAGTATAATTTGCCGGTAATAATATTACAACTATGTTTTACA TGAACTCTTATAGCTCATTTTTTCATTCTATTTCCTATTGCGGTTGTTATGTTTCAAACTTTTAATAATTCTGTACAACC CTAAGCCTCCAACATAAACTTTCTATTTAGCTATTGCACTGTTGCTCTTTGAGAGTCTGGTCGATGAAATTTAAGTAGAC TATTAAATGGTTCTTAACTGCATAGATTTTAAGAAATTTGCTGATGTATAATAGAGCTGCTTAGATATGCTAATAGGGTT AGTTCAAAAATTCCCAGCTTGTCAATATTACCTATTTTCACATAAAGAAAGAACATCTTGGTAATGCTATCAAGATTAAG AAATGGGCTTATTTTAGAGAAGATGCAATATACTTGCACGACTTGCTAAATTCTCATTTCAAAATACATCCAGTCTAGGC AGTGAGTGCAATAGCAGTATTTTGACTTTGAGGGAAGGCATATTTCTCGTGAAGATGTTTCTTTTGCCGTGGACCTCTGC TAAACTGGCCTTCACCTAAAGAATTTTCCTAGTCCTTCTGTTGTACAACTGGTCCTTGTGTCATGACAATCTATACGTTT TCCCTTTTATATTTACCTAATATTGTGAAATTTGTCGCTTCATATGAATTTCCAAAGTTCGAATCTAATTTTTTTGACTT CTGTAATCATATTAATAAGAAAAGAAAGTTTGTCACGTTGCAAATGCCATAATGATATTCTTTTGTCTTATGAAGGAAGC ACCTTGTGGGGACTTTGTTACCCACTGTTGCTGTCATCTGTGTGCCATTTGTCAAGAGTATCGTGAGATACGTGAAAGAT CTGGGGATAGTGAAGCCACCGATATGAAGCTGGCTGTAGTTACAGCTCCACCAATCCAGGCAATGCAGTCAGATTCCAAG TAGTAATGCTACTAGCCTGCCCTCCTCATCTATCTATGAATTGAAGGGTTGCAAACTTGGCTGTGGCTTGTGGTTCATTA CGCGCTTCAAGTTCAAGCAGTTATACCATAATGCTGATTATCAATTTTTTTCAGTTTTCCTTATCCAGTTCTCTTTTGAG AAAACTAGAAGATTATAAAAAACTCAGTTGTAAATGAAATTTTAGTATGTACAGTGGCTAGTTATGTTACTTTTTCATTG TCATGTTTACTCTTTTTTCATTCATGATAAAGGAAACAACTTATCCCGTGGTATTACCTAAAGTGTCCTTATCAGGATCA TTCCAACTTGTTCTTCCAGAGATTTGCCTCTCCTGGAGTAGGTTTATGCTTTATCTTTATGTGATTTGCTGACCAACATA GAAACTAAGCCTTTCCGGGTCAATTATTGAGTAGGGTTTATGTTTGAGATTTATGTCATCGGCCTTCCAAGTAGAAACTA TGCTTTTTGGGTTATGTGCACGTGTGGATTATAGTTGGCAGCATCCAAACCCCAGCTCGCAGTATGCATGCTGAGATTCG TCCATGATTCACAAAATCACGTTAGCTCAGTAAACATGATTTTGAGCATCAAATAAT
CDS sequence (LotjaGi2g1v0447400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAACCAACATGGTTATGTGCCACCTGCTTACATTCCTTTGGGGCAATCAGATTCAGTGGCATTGGATGTTTCTCC ACCTCAGGGCAATGAGCAACATAGGACCAGCAATGTATCAAACCAAATCCAGCCTCAGTGGTCTTCTGGAATCTGTGCTT GTTTCGATGATATGCAGAGCTGTTGCATAGGTTGTCTTTGTCCTTGCTTTCTCTTTGGGAAGAATGCAGAATTTCTCGGT TCTGGAACTTTCTTGGGATCATGTGTTACCCATTTTGCATTGTGGGGTCTGGTTAATGTAGGCTGCTGCTTTTTAACTGA TGGCTTGCTTTTGGGATTACCTGGATGCCTTGTTTCAACTTATGCTTGTGGCTACCGCAGGACCTTAAGGTCAAAGTATA ATTTGCCGGAAGCACCTTGTGGGGACTTTGTTACCCACTGTTGCTGTCATCTGTGTGCCATTTGTCAAGAGTATCGTGAG ATACGTGAAAGATCTGGGGATAGTGAAGCCACCGATATGAAGCTGGCTGTAGTTACAGCTCCACCAATCCAGGCAATGCA GTCAGATTCCAAGTAG
Protein sequence (LotjaGi2g1v0447400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNQHGYVPPAYIPLGQSDSVALDVSPPQGNEQHRTSNVSNQIQPQWSSGICACFDDMQSCCIGCLCPCFLFGKNAEFLG SGTFLGSCVTHFALWGLVNVGCCFLTDGLLLGLPGCLVSTYACGYRRTLRSKYNLPEAPCGDFVTHCCCHLCAICQEYRE IRERSGDSEATDMKLAVVTAPPIQAMQSDSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 184 | 184 | 2.8E-48 | – | |
| PANTHER | 1 | 184 | 184 | 2.8E-48 | ||
| TIGRFAM | 46 | 162 | 117 | 1.6E-34 | ||
| Pfam | 47 | 160 | 114 | 5.9E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0447400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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