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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006461
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 50 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.233s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0054669.1
n.a. PLAC8 family protein [Theobroma cacao] gi|508725741|gb|EOY17638.1| chr0 17562090 17564220 +
3 domain predictions
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Lj0g3v0187029.1
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr0 91216023 91217153 +
3 domain predictions
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Lj0g3v0324739.1
n.a. Cornifelin [Medicago truncatula] gi|357517947|ref|XP_003629262.1| chr0 169758895 169764595 +
3 domain predictions
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Lj1g3v0627500.1
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr1 8160023 8161189 -
3 domain predictions
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Lj1g3v0627500.2
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr1 8160023 8161189 -
3 domain predictions
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Lj1g3v0627500.3
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr1 8160023 8161189 -
3 domain predictions
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Lj1g3v0627500.4
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr1 8160553 8161189 -
3 domain predictions
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Lj1g3v0627590.1
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr1 8206118 8207616 -
3 domain predictions
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Lj1g3v4579230.1
n.a. PREDICTED: cell number regulator 8-like [Glycine max] gi|356572417|ref|XP_003554365.1| chr1 54547361 54550761 +
3 domain predictions
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Lj2g3v1670960.1
n.a. PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Glycine max] gi|356538319|ref|XP_003537651.1| chr2 26011424 26017323 -
3 domain predictions
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Lj2g3v2124460.2
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like [Cicer arietinum] gi|502159324|ref|XP_004511469.1| chr2 31928084 31930490 -
3 domain predictions
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Lj3g3v0257300.1
n.a. Cornifelin-like protein [Medicago truncatula] gi|357454899|ref|XP_003597730.1| chr3 1517008 1519946 +
3 domain predictions
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Lj3g3v0537390.1
n.a. PREDICTED: cell number regulator 1-like [Glycine max] gi|356521498|ref|XP_003529392.1| chr3 6044515 6046329 -
3 domain predictions
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Lj3g3v3430200.1
n.a. PREDICTED: cell number regulator 6-like [Glycine max] gi|356517764|ref|XP_003527556.1| chr3 42101627 42105449 +
3 domain predictions
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Lj3g3v3640190.1
n.a. PREDICTED: cell number regulator 6-like [Cicer arietinum] gi|502146207|ref|XP_004506350.1| chr3 44398957 44401572 +
3 domain predictions
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Lj4g3v0435290.1
n.a. PREDICTED: cell number regulator 5-like [Glycine max] gi|356549427|ref|XP_003543095.1| chr4 5729505 5732187 +
3 domain predictions
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Lj4g3v3112830.1
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr4 41412154 41417023 +
3 domain predictions
 –
Lj4g3v3112830.2
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Cicer arietinum] gi|502138358|ref|XP_004503375.1| chr4 41412154 41414007 +
3 domain predictions
 –
Lj4g3v3112860.1
n.a. PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Glycine max] gi|356511317|ref|XP_003524373.1| chr4 41419633 41421224 +
3 domain predictions
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Lj5g3v1176710.1
n.a. PREDICTED: cell number regulator 10-like [Cicer arietinum] gi|502116495|ref|XP_004495459.1| chr5 18923334 18924736 -
3 domain predictions
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Lj6g3v2116870.1
n.a. PREDICTED: cell number regulator 5-like [Glycine max] gi|356549427|ref|XP_003543095.1| chr6 24693041 24696021 -
3 domain predictions
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LotjaGi1g1v0072500.1
n.a. Plant cadmium resistance protein; TAIR: AT3G10980.1 PLAC8 family protein; Swiss-Prot: sp|Q8S8T8|PCR10_ARATH Protein PLANT CADMIUM RESISTANCE 10; TrEMBL-Plants: tr|I1JIC0|I1JIC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0072500 LjG1.1_chr1 10183914 10187120 +
3 domain predictions
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LotjaGi1g1v0245000.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT5G35525.1 PLAC8 family protein; Swiss-Prot: sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3; TrEMBL-Plants: tr|I3RZW1|I3RZW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0245000 LjG1.1_chr1 58842842 58844836 -
4 domain predictions
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LotjaGi1g1v0245000.2
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT5G35525.1 PLAC8 family protein; Swiss-Prot: sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3; TrEMBL-Plants: tr|I3RZW1|I3RZW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0245000 LjG1.1_chr1 58843446 58844714 -
4 domain predictions
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LotjaGi1g1v0245000.3
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT5G35525.1 PLAC8 family protein; Swiss-Prot: sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3; TrEMBL-Plants: tr|I3RZW1|I3RZW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0245000 LjG1.1_chr1 58843559 58844702 -
4 domain predictions
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LotjaGi1g1v0245300.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT1G14870.1 PLANT CADMIUM RESISTANCE 2; Swiss-Prot: sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2; TrEMBL-Plants: tr|I3RZW1|I3RZW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0245300 LjG1.1_chr1 58888074 58891155 -
4 domain predictions
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LotjaGi1g1v0245400.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT5G35525.1 PLAC8 family protein; Swiss-Prot: sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3; TrEMBL-Plants: tr|I3RZW1|I3RZW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0245400 LjG1.1_chr1 58913857 58915724 -
4 domain predictions
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LotjaGi1g1v0600200.1
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|A0A1J7FNL2|A0A1J7FNL2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0600200 LjG1.1_chr1 114460302 114464319 +
4 domain predictions
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LotjaGi1g1v0692600.1
n.a. Cell number regulator 8; TAIR: AT2G37110.1 PLAC8 family protein; Swiss-Prot: sp|B4FUS3|CNR8_MAIZE Cell number regulator 8; TrEMBL-Plants: tr|I3SQW9|I3SQW9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0692600 LjG1.1_chr1 126051880 126055371 -
4 domain predictions
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LotjaGi2g1v0379100.2
n.a. SKP1-like protein; TAIR: AT4G35920.1 PLAC8 family protein; Swiss-Prot: sp|B6SJQ0|CNR13_MAIZE Cell number regulator 13; TrEMBL-Plants: tr|I1J8I6|I1J8I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0379100 LjG1.1_chr2 87584290 87595466 -
3 domain predictions
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LotjaGi2g1v0379100.4
n.a. Protein MID1-COMPLEMENTING ACTIVITY 1; TAIR: AT4G35920.1 PLAC8 family protein; Swiss-Prot: sp|Q8L7E9|MCAC1_ARATH Protein MID1-COMPLEMENTING ACTIVITY 1; TrEMBL-Plants: tr|I1LI39|I1LI39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0379100 LjG1.1_chr2 87589724 87596288 -
3 domain predictions
 –
LotjaGi2g1v0379100.5
n.a. Protein MID1-COMPLEMENTING ACTIVITY 1; TAIR: AT4G35920.1 PLAC8 family protein; Swiss-Prot: sp|Q8L7E9|MCAC1_ARATH Protein MID1-COMPLEMENTING ACTIVITY 1; TrEMBL-Plants: tr|A0A151THS6|A0A151THS6_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi2g1v0379100 LjG1.1_chr2 87590403 87595466 -
3 domain predictions
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LotjaGi2g1v0447400.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT2G40935.1 PLAC8 family protein; Swiss-Prot: sp|Q8S8T8|PCR10_ARATH Protein PLANT CADMIUM RESISTANCE 10; TrEMBL-Plants: tr|I3SQ97|I3SQ97_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0447400 LjG1.1_chr2 94153780 94156636 -
4 domain predictions
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LotjaGi3g1v0018600.1
n.a. Plant cadmium resistance 2; TAIR: AT1G52200.1 PLAC8 family protein; Swiss-Prot: sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8; TrEMBL-Plants: tr|I3T5L5|I3T5L5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0018600 LjG1.1_chr3 1951685 1956463 +
4 domain predictions
 –
LotjaGi3g1v0099100.1
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|A0A1J7IKI0|A0A1J7IKI0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099100 LjG1.1_chr3 12329107 12333119 -
4 domain predictions
 –
LotjaGi3g1v0099100.2
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|A0A1J7IKI0|A0A1J7IKI0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099100 LjG1.1_chr3 12329388 12331202 -
4 domain predictions
 –
LotjaGi3g1v0099100.3
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|A0A1J7IKI0|A0A1J7IKI0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099100 LjG1.1_chr3 12329388 12332866 -
4 domain predictions
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LotjaGi3g1v0209800.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT1G14870.2 PLANT CADMIUM RESISTANCE 2; Swiss-Prot: sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2; TrEMBL-Plants: tr|I3RZW1|I3RZW1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0209800 LjG1.1_chr3 31106102 31110842 +
4 domain predictions
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LotjaGi3g1v0209800.2
n.a. Plant cadmium resistance 2, putative; TAIR: AT1G14870.1 PLANT CADMIUM RESISTANCE 2; Swiss-Prot: sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2; TrEMBL-Plants: tr|A0A1J7IB57|A0A1J7IB57_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0209800 LjG1.1_chr3 31106102 31110842 +
4 domain predictions
 –
LotjaGi3g1v0545100.1
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|I3SSP8|I3SSP8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0545100 LjG1.1_chr3 96114944 96118255 +
4 domain predictions
 –
LotjaGi3g1v0545100.2
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|I3SSP8|I3SSP8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0545100 LjG1.1_chr3 96115110 96118058 +
4 domain predictions
 –
LotjaGi3g1v0545100.3
n.a. Cell number regulator 6; TAIR: AT2G45010.1 PLAC8 family protein; Swiss-Prot: sp|B6SGC5|CNR6_MAIZE Cell number regulator 6; TrEMBL-Plants: tr|I3SSP8|I3SSP8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0545100 LjG1.1_chr3 96115524 96117737 +
4 domain predictions
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LotjaGi4g1v0047600.1
n.a. Plant cadmium resistance protein; TAIR: AT1G11380.1 PLAC8 family protein; Swiss-Prot: sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8; TrEMBL-Plants: tr|Q2HTU7|Q2HTU7_MEDTR PLAC8 family protein; Found in the gene: LotjaGi4g1v0047600 LjG1.1_chr4 5729917 5732719 +
4 domain predictions
 –
LotjaGi4g1v0073400.1
n.a. Plant cadmium resistance 2, putative; TAIR: AT5G35525.1 PLAC8 family protein; Swiss-Prot: sp|B6TZ45|CNR1_MAIZE Cell number regulator 1; TrEMBL-Plants: tr|K7L2Z5|K7L2Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0073400 LjG1.1_chr4 9360968 9368819 +
4 domain predictions
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LotjaGi4g1v0130900.1
n.a. Protein MID1-COMPLEMENTING ACTIVITY 1; TAIR: AT4G35920.1 PLAC8 family protein; Swiss-Prot: sp|Q8L7E9|MCAC1_ARATH Protein MID1-COMPLEMENTING ACTIVITY 1; TrEMBL-Plants: tr|A0A1J7GGR6|A0A1J7GGR6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0130900 LjG1.1_chr4 19158024 19163716 +
3 domain predictions
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LotjaGi4g1v0455100.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT1G14870.1 PLANT CADMIUM RESISTANCE 2; Swiss-Prot: sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2; TrEMBL-Plants: tr|I3S7Y4|I3S7Y4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0455100 LjG1.1_chr4 82680323 82682486 +
4 domain predictions
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LotjaGi4g1v0455200.1
n.a. Protein PLANT CADMIUM RESISTANCE 2; TAIR: AT1G14870.1 PLANT CADMIUM RESISTANCE 2; Swiss-Prot: sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2; TrEMBL-Plants: tr|A0A0B2QJF6|A0A0B2QJF6_GLYSO Protein PLANT CADMIUM RESISTANCE 2; Found in the gene: LotjaGi4g1v0455200 LjG1.1_chr4 82687466 82689250 +
4 domain predictions
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LotjaGi5g1v0188400.1
n.a. Plant cadmium resistance 2; TAIR: AT3G18460.1 PLAC8 family protein; Swiss-Prot: sp|D9HP26|CNR10_MAIZE Cell number regulator 10; TrEMBL-Plants: tr|A0A0D2QGB0|A0A0D2QGB0_GOSRA Uncharacterized protein; Found in the gene: LotjaGi5g1v0188400 LjG1.1_chr5 47732143 47733618 -
4 domain predictions
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LotjaGi6g1v0082200.1
n.a. Plant cadmium resistance protein; TAIR: AT3G10980.1 PLAC8 family protein; Swiss-Prot: sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8; TrEMBL-Plants: tr|I1LMW6|I1LMW6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0082200 LjG1.1_chr6 15875534 15878438 -
3 domain predictions
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LotjaGi6g1v0341600.1
n.a. Plant cadmium resistance protein; TAIR: AT1G11380.1 PLAC8 family protein; Swiss-Prot: sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8; TrEMBL-Plants: tr|I1M2D9|I1M2D9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0341600 LjG1.1_chr6 65514913 65518610 -
4 domain predictions
 –