Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0448300 |
| Transcript ID | LotjaGi2g1v0448300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tudor/PWWP/MBT superfamily protein; TAIR: AT3G03140.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp|P59278|Y1745_ARATH Uncharacterized protein At1g51745; TrEMBL-Plants: tr|K7LMH1|K7LMH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94217824..94222861) extracted from Lotus japonicus Gifu genome v1.2.
AGAAGATTCAAACTTTGATGTGTTGGAACTTCAATTGCAAAGTCAAAATTGAAAACCCTAAAAACCAAATTTCCCCAAAT CGGAATGGAATTCAGTGCCCTAACCTACATCTAACTTTTCAGACTATCCACTCCACTCACGACGGTTCCTCCGTCCATCG TCCTCATTCGCCGGCGGCCAAGCCACCGTGTCCTTTCACCTTCGACAGGGAGAAAAAACGAGAGAGAAAAACTGGGGAAG CGAAAGAAAGCGAGAGGGAGAGTGGGAGGAGGAGGGATGGAGAGTCCCGGGTCAGCTGCGGTGGACTGCGTCGTCGGATC CATTGTGTGGGTCCGACGACGGAACGGGTCGTGGTGGCCGGGGCAAATACTTGACTCCGATGACCATTCTACTTCTCATC TCACCTCACCTCGATCAGGAACTCCCGTTAAGCTTCTCGGCAGGGAAGATGCAAGCGTGTAATGTTCCTTTGCCTTCAAT TGTTCATGTTTGGTTTCATTTCTGTAATTCATTACTGATTAACATTCTTGGTCTTTGTTTGGAAAAATAAGCTCAATTCA CACACATACACACTTCTCATTGCAATATTTTCTGTAATTTTTTCACTGTTATAGTAGCACAGATGAGAATACTGTGATAA TTAGCCAAATGATATTGTTTTTGTATTGATTTTACGCGTTTGTTATAGCTGTTTCTGTGTCGAATATTTTTCAAAAATTG ATGTATATCCATGTGTTTGTTATATTGGATCTGTGTTCCCTGTTGAGTTTGTGCTTTTTAGGTTATTAATGTTTTTTTTT CTATTGATTTGCTTCTGTGTTGGTTTTTTTTTTAACAGAGATTGGTACAATTTGGAGAAATCCAAGCGTGTGAAGCCATT CCGATGTGGTGAATTTGATGCATGTATTGAAAGGGCGGAGTCAGCACATGGTATGCCATTAAAAAAGAGAGAGAAATATG CACGTAGAGAAGATGCTATCCTCCATGCTCTTGAACTTGAGAAGCAAATGTTGAAGAAGCAAGAAAAATCAGGTATTGCT TCTGATTCAACCAATTTCATGCCATATTGTATTATAATGTTGAGAAGGGTATAGTCATATCTCCAGGAACATTATGAAAT GATATTAAAAAACAAAATTACAAACAACATCTTGGGGAAGAGGCATGCAGGATTTTGGGATCAAAATTGCCTTTTGAGAG GGAAGCTCTCATCTTCTGATGATCCAGATGTTTCTCAGAAACTTACAGATTACAGTAGACGATAGTGCTCACTGCTCAGA CTCTAACAATTTATGGTCTTTGCATAGGAAGTACAATTCCAGCTAATGGTAAAATTATTTTAATGAAAGAAAAATAGATG AGCAGTTGAGAGAGAAATATTTAATGAAGTAGCTTAATTTTTTTTATAAAATAATTAAACTAATTAAAATTAGGGTATCA TAAAACCTGACTGTGATTCTTATTTCAGGAGTGGTGCAAATGGGTCCAGTGTTCCGAGCAAAGAGGAGCAGATGCATGTA TTTGCCAGCTGAGTCTAGTGATTCTCTTGATTACAAGGAGACTCTAACCAATTTTCCAGGATCATCTTCCCAACCTGCAG GAGAGAATCCTTATTCCAGTTCTTTGGCTGAAGAGAGTGAATCTGCTTTTATGGATGATGTTGAATCTGATTCTTCGGAA ACTGAGTCTACAAATTTGGATTCGGATTCTTCTGAGACAGAGCTGGACAGGGATGAAGAAACGATTATACTTTCAGGTTT AGTTTCTTTCGTATTTATTCTATGTTATCCATTTCTTAGCGATATCATCTAATGGTCACAACTTGAAAAGGAAAAATAAA ACTCCTAATATCTGTTTATTTGTGCCAATTTACTTCCCTTGCACTTTATTATATTTCTTGTGCTGAAAGTAGTATTAGGG TCTGTTTGGTTTCCATTTTCGTTTTCTGTGTGGAATGAATTCTGATTACAATTATGAATACAGGCCATTATACAAAGAGA TGCTTAGATGTCAATAACAGAAAGTCTAAGAGACTAAACAACTAACTGACTGATTGGTAAAAAGAGTAAATAATACTCTG CAAGTGCAAACAAAACTATACGAAAACAAGAATACAACCGTTAATCAAGAAGTACACCATACATAGTGCAAACTTGTCTA TAACCCTCAGGTCCCTCACTTTTTTACAAAGAAATTGAAATCTAGTAGGTGCAAGTGCATGTGTCAGAATATCAGCAATT TGATCTTCAGTTGGAACATGATAACCGTAAAGTTGTTTCTTTAGAACCTTTTTTCTAAAGAAGAAAATATCAAGTTCCAT ATGCTTTGTATGGCAATGAAGCGCTGGCTTATGTGCTTGTGTTACAGTTTTCATATCATCACAGAATATTTGAGGAGCTG TAAAAGGAATCTGGAGCTCAGTAAGTAGAGACTGTAACCAAAGTGATTCTGCAACAGTAGAGGCAATACTCCTATATTCT TCCTTAGTACTAGATATGGAATGTAGAGTTTGCTTTTTTGACCACCATGATACAAGACTTGAACCCAAAAAAATATGCAA GACACTGAAGTTGACCTGCGGTCACCCAATTTTTTTTTTCTTTCTAGATTTGCCATGGTACCCTTGATGGTGTCAGTGCC TACCTTAGATCCGTTTATTGTGCCACCCACAAATGGGCCACCCGCAGATATTCAATCTTGCAAACTTCACACTCCTGAGA TATCCAGCCCTAGTCGCGAGGAGCGTGTATTAAGGTCCTACACTACACTAACTAGAAGATATGGAAAAATTAGTTCTTAA CTTCCTATATAGGATTAAACAATCATTATGCCTGAGCTAGCTGGAGTAGAATTTGGTCTAACCTGAATTTTAAGAACATC TTGTAGTTGCTTGATGCTGGAATCCAGAGGAGTATCACTTGGGTAACAATTTGCCATGCCCATTTCCTCAAATATGTCCA AAGCATATTTGAACCAAGTAACAGCAACACCTATTATATTAGAGTGAGCAACCACAATCCCAAAAAAATATTTTAGAGGG CTCAAGTCTTTGGTCTGAAAGTTGTGTGATAGATGTTGTTTAACATTTTGGATGTCGCCCCCGATCATTAGTAGTGATGA TGATGTCATTGACATAAACAACCAGGTAAATGTGTTTTCCTGAGGAAGCAAGAAGGAAGAAGACAGAATGGCAAGCCTCA CATCTAGTCATGCCAAATTTCTGTCTTGCCTTGTAAGACTGTTATAAAATTTATCTGAGTTTAAAGTGAATCTCTCTGTT TTGAACTTGTTGTTGGAGTTGTGTATGACTGTTAGTTTTATTTTAGTTCTAAACTTCTAATTCAAATCATTCTTTTTCAC TCTTCTGATGTAACTGTAAATGCAGAAACTGTTGGCGATCCTGAAGAACAAGAAAGTACTAGCAGTGAGGAGCCTGATGA GTTGGCAATTTCTGGTGACATGCCTCACCTCTATCGTCGTGAACCTATAACATGCAATGAAGCTGTATCCAAATGGCAAT TAAAAGGAAAAAGGAACAATCGCAATCTTGTAAAAAGATCTGGTGTTGTTTCTAATAGGAAAGATGGTGTTTTACATGGA GCAGATGTAGAAGGGCAAAGAAACCATTTAAACATGAGATCAGGGTCTAGTTTGCATTACTACAGAAATGATTACAGTGA TGTCCTTGATGAACATGATCAGATGTTCGGATTGGAAGATGAATACTCTCCGACTCCTAGAGCAGTAGCGAAAAAAACTC ATCATGATGTTGATTGGGATGAATGTGCTTGGGAGGATGAGCCTGCTTCGAGAGGATATTGGGATATTAAAGGGTTTGCT CCATTATATAGTGATAGTTATAATTCTCATGGGCGGAATGGGCCAATGCTCGTAGATGTAGATTTGAAGGTTCAAGCAAA TGCAAGTTACCGAAAAAATTCTGTCTCCTTTATTTCTATCACTAGTGAATTGGATGGGAAGTCAATAATAGGGCACCCAA TCCAAATTGAAACCCTCAAGGATGGTTCATCTGATAACCTGTTTTCTGCTATTGATGACTACAGTAATGATGGATTTGGC TTTGAGGGAAGTGCGGTGCTTCCACCAGCTTGGAGGACTGCGAGGAGAACAGCAAATGTTCGCGTTCCTCGTCCGCATAT ACTTGGTGCTGAAACTGTGGCAGATTTCTCCTTAGATCAAGAAAGAAATACTGAATACAAGAAATTGAATGGTGGAAGTT TCAGTCATAATAAGGCAAGCCTTCCGAGGAAAAGTGGCCATAACAGTGTTGGACCTTCAATCAACAACAAGTCCTTCAAA AAGACGCCGAAGAAAGTGAGCTTGTCATCTAGTCAGAAAACTAGAACTCTCTCCTCATTATCTGCTGAACATCATAGTAA AAAGCCATCACTTGGTAGAAGTTTTCATCAAACAGAAAGGTTGACTAAACCAGAGGTCTCTGGGCTCACCACTGTAGCTT GCATACCAGTTAAATTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCACCTCTAAGAGCAGCTAATAACGCAGCT TTGTTGAATACTGCTATGGAGAGAAACTCATAGGTTACCTGTACATTGTTAAATGAGAACAATAATCTTACAGTGGCACA ACAATTTTTTGGATATTTATTGTTTCCAAAGAAAGAGAAGTCTTAATTCTTTGTTTGTATTCTAAGGATGAATGTCAAAT ATTAACCCAAATTCATTGTGTAACTAGATAAATGGATGGTACATGAAGCCATTTTGCCCCCTTTTAAAGTGCAAACTTCT TCGATTTTGATTTCTTGAGGAAATGGGGAACCCAACTTTAGTAAAAAGCATTATTTGACACGAAGGCTTAATTTCAATTC TGAGTGAAGGGAGATACAGTGAATCATAAGTTGAAAATTTAATGTTATTGAGAGACAAACGGAATATGAACTAGTAGATA TAATCATGATGAGCATGACCAATACGATCCTCTCTAATACTCTATGTTCAATGGACTCTTTAATCTTTATTATTAGGT
CDS sequence (LotjaGi2g1v0448300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTCCCGGGTCAGCTGCGGTGGACTGCGTCGTCGGATCCATTGTGTGGGTCCGACGACGGAACGGGTCGTGGTG GCCGGGGCAAATACTTGACTCCGATGACCATTCTACTTCTCATCTCACCTCACCTCGATCAGGAACTCCCGTTAAGCTTC TCGGCAGGGAAGATGCAAGCGTAGATTGGTACAATTTGGAGAAATCCAAGCGTGTGAAGCCATTCCGATGTGGTGAATTT GATGCATGTATTGAAAGGGCGGAGTCAGCACATGGTATGCCATTAAAAAAGAGAGAGAAATATGCACGTAGAGAAGATGC TATCCTCCATGCTCTTGAACTTGAGAAGCAAATGTTGAAGAAGCAAGAAAAATCAGGAGTGGTGCAAATGGGTCCAGTGT TCCGAGCAAAGAGGAGCAGATGCATGTATTTGCCAGCTGAGTCTAGTGATTCTCTTGATTACAAGGAGACTCTAACCAAT TTTCCAGGATCATCTTCCCAACCTGCAGGAGAGAATCCTTATTCCAGTTCTTTGGCTGAAGAGAGTGAATCTGCTTTTAT GGATGATGTTGAATCTGATTCTTCGGAAACTGAGTCTACAAATTTGGATTCGGATTCTTCTGAGACAGAGCTGGACAGGG ATGAAGAAACGATTATACTTTCAGAAACTGTTGGCGATCCTGAAGAACAAGAAAGTACTAGCAGTGAGGAGCCTGATGAG TTGGCAATTTCTGGTGACATGCCTCACCTCTATCGTCGTGAACCTATAACATGCAATGAAGCTGTATCCAAATGGCAATT AAAAGGAAAAAGGAACAATCGCAATCTTGTAAAAAGATCTGGTGTTGTTTCTAATAGGAAAGATGGTGTTTTACATGGAG CAGATGTAGAAGGGCAAAGAAACCATTTAAACATGAGATCAGGGTCTAGTTTGCATTACTACAGAAATGATTACAGTGAT GTCCTTGATGAACATGATCAGATGTTCGGATTGGAAGATGAATACTCTCCGACTCCTAGAGCAGTAGCGAAAAAAACTCA TCATGATGTTGATTGGGATGAATGTGCTTGGGAGGATGAGCCTGCTTCGAGAGGATATTGGGATATTAAAGGGTTTGCTC CATTATATAGTGATAGTTATAATTCTCATGGGCGGAATGGGCCAATGCTCGTAGATGTAGATTTGAAGGTTCAAGCAAAT GCAAGTTACCGAAAAAATTCTGTCTCCTTTATTTCTATCACTAGTGAATTGGATGGGAAGTCAATAATAGGGCACCCAAT CCAAATTGAAACCCTCAAGGATGGTTCATCTGATAACCTGTTTTCTGCTATTGATGACTACAGTAATGATGGATTTGGCT TTGAGGGAAGTGCGGTGCTTCCACCAGCTTGGAGGACTGCGAGGAGAACAGCAAATGTTCGCGTTCCTCGTCCGCATATA CTTGGTGCTGAAACTGTGGCAGATTTCTCCTTAGATCAAGAAAGAAATACTGAATACAAGAAATTGAATGGTGGAAGTTT CAGTCATAATAAGGCAAGCCTTCCGAGGAAAAGTGGCCATAACAGTGTTGGACCTTCAATCAACAACAAGTCCTTCAAAA AGACGCCGAAGAAAGTGAGCTTGTCATCTAGTCAGAAAACTAGAACTCTCTCCTCATTATCTGCTGAACATCATAGTAAA AAGCCATCACTTGGTAGAAGTTTTCATCAAACAGAAAGGTTGACTAAACCAGAGGTCTCTGGGCTCACCACTGTAGCTTG CATACCAGTTAAATTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCACCTCTAAGAGCAGCTAATAACGCAGCTT TGTTGAATACTGCTATGGAGAGAAACTCATAG
Protein sequence (LotjaGi2g1v0448300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESPGSAAVDCVVGSIVWVRRRNGSWWPGQILDSDDHSTSHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKPFRCGEF DACIERAESAHGMPLKKREKYARREDAILHALELEKQMLKKQEKSGVVQMGPVFRAKRSRCMYLPAESSDSLDYKETLTN FPGSSSQPAGENPYSSSLAEESESAFMDDVESDSSETESTNLDSDSSETELDRDEETIILSETVGDPEEQESTSSEEPDE LAISGDMPHLYRREPITCNEAVSKWQLKGKRNNRNLVKRSGVVSNRKDGVLHGADVEGQRNHLNMRSGSSLHYYRNDYSD VLDEHDQMFGLEDEYSPTPRAVAKKTHHDVDWDECAWEDEPASRGYWDIKGFAPLYSDSYNSHGRNGPMLVDVDLKVQAN ASYRKNSVSFISITSELDGKSIIGHPIQIETLKDGSSDNLFSAIDDYSNDGFGFEGSAVLPPAWRTARRTANVRVPRPHI LGAETVADFSLDQERNTEYKKLNGGSFSHNKASLPRKSGHNSVGPSINNKSFKKTPKKVSLSSSQKTRTLSSLSAEHHSK KPSLGRSFHQTERLTKPEVSGLTTVACIPVKLVFSRLLEKINRPPLRAANNAALLNTAMERNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 621 | 621 | 0.0 | – | |
| PANTHER | 1 | 621 | 621 | 0.0 | – | |
| Gene3D | 5 | 125 | 121 | 1.7E-9 | – | |
| SUPERFAMILY | 12 | 117 | 106 | 7.22E-10 | – | |
| ProSiteProfiles | 13 | 68 | 56 | 10.211 | ||
| Pfam | 13 | 93 | 81 | 2.9E-9 | ||
| MobiDBLite | 154 | 241 | 88 | - | – | |
| MobiDBLite | 154 | 182 | 29 | - | – | |
| MobiDBLite | 184 | 212 | 29 | - | – | |
| MobiDBLite | 500 | 572 | 73 | - | – | |
| MobiDBLite | 500 | 552 | 53 | - | – | |
| MobiDBLite | 553 | 572 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0448300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…