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LotjaGi2g1v0450300.1

Overview

Field Value
Gene ID LotjaGi2g1v0450300
Transcript ID LotjaGi2g1v0450300.1
Lotus japonicus genome version Gifu v1.2
Description Ubiquinone biosynthesis O-methyltransferase; TAIR: AT2G30920.1 coenzyme Q 3; Swiss-Prot: sp|O49354|COQ3_ARATH Ubiquinone biosynthesis O-methyltransferase, mitochondrial; TrEMBL-Plants: tr|I3SGG9|I3SGG9_LOTJA Ubiquinone biosynthesis O-methyltransferase, mitochondrial; Found in the gene: LotjaGi2g1v0450300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:94368598..94372984) extracted from Lotus japonicus Gifu genome v1.2.

TCGGTCTCGAAGATTGCAGAGCAAGGGTTGGGAAATGGGTTTGGAGCGCTGAAATGGGTTTTGAAAAAACCCCTGTCAAT TACATAGTAATATAATACGGAACTTTATATTCCGTATTGAATACGAAATTTAATATTCCGTATTCTTTTAAAGGGGTTTT TTTTAGTAATTTCCCCACTTTAAGTGGGGCGCGGAGCCCCATAGGGGCCCCCAAAACCCAACTCCCTCTCTCACTCATTA TTCCGGGAACCGTCGGAGACCACAACGCGGTAGCTCCTGCGGCGGCGCCACCAGCTTCAAGTCGGAGCTCCATATCCGAA GGCTGATAGCAAAGCAAGAGAAGAAGATCCAAAGCTTACCGGGACCATGAATCATCTCCGGAACCTGAACGGAATCACCA ACCGCCGCATTCTCTCCAACGCTAGGTGCTTCTCCGGTGCAGCTAAAGAACACTCTTCCCTGAACCGCAATGAGCTCGCC AAGTTCGCTGCCATCGCTGAAACCTGGTGAGCTTTTAATCCTGATTTTGACTCTGTTTGCTGCCACAGACTCAACTACAG TTGGGAGGGGAAATTGAGAAATTGGGATTTGGGTTTTGGCTTTTGCAATTGGAGATTGCAAAATTTCCAATCTTTTATAA TATTGGCACTGGAACAGTGAGAGTTGAAAGCATGTGAACTTTGTTGTTATAGATTAGATACTATGTTGAATGTTATTGTT GTTCAAGGTGAGAAGATTTTGATTTATATTCTACTGAATTTTCTGCTGTTTGCTTGGTTCCATTTGTTAGATTCCCATAT CCTCGAGGATTTAAGTTTCTGTAAGAGGATGTTAGCAATGTATGTGTGCCTAGTTTGAGAATCTGGAATTATGGATAACA TCTATTTGCCATTTTTTTGATGTAATTAGGTGGGATTCTGAAGGCCCGTTTAAACCATTGCATGCTATGAATCCTACAAG ACTTGCTTTCGTCCGGTCTGTGCTATGTCGGCATTTTAAGTAAGCCATCTCTTTTGATGTTCTTCTATTTAGTTATTACT TTTTCCAGTCCATTTAGCCTTGTGATATCCATTTGAGTCTGTTGGATGTTTATGCGTAAAGTTACTTGGGCAGAATGTGC AATAATCAGGTCCATTTATGTATTTATTTATTCTCTGGGGCTACTATTGGGATAATAATCAGATGTCCCTTGTGTCAGGA AGGACCCTTATAGTGCTAAACCGCTTGAAGGACTTAAAATTGCTGATGTAGGTTGTGGAGGTGGAATTCTTTCTGAGGTA TGTCGTTTATCCTTTTTGTTTGGAAAAATAACCCTTTTCCTTATATCTTCTAGCTGATTATTAACTTTAGGTTCAGTGGT GACTATATTTGTTGGGTAGAAATGATGAAATCTAAATTTGTTGACGATATCACTTTTAATCATAATCCTCATTTGAATTT GTAGCATTAAAATTGGTTTGGAGGATATTTGTTAGCTAGAAATATGGAAACCTAAATTCTTTGGTGCATATTCCCCTGCA TCTCTAGAGCATTAAGAATGTTATTTGTTTTTAATTGCAAATGAATGCTCTTTTTATTGTTATTTATAGTTATACTTCTC TATTGTTCTTCAGCCCTTAGCTCGATTGGGAGCTACAGTGACGGGCGTTGATGCTGTAGAGAAGAATATCAAGATTGCTC GACTTCATGCTGTATGTTTATCTTATGTTTACTATTTTTATTTTGCAATAGTTGTTTCAAATTTGAAAGTTATCAGTATG GTCGTACCAAATTGATTAGTTTACTGTACTGTTTATTGGTGGAAGCAGTTGTTGAATTCTTACTAGTATTAAGTAAACTG AGTACATTACATCCTTCACTTTTTGCTGGACAACTTATTATTTCTCATCTACAGGATTTGGATCCAACAACTTCAACTAT TGAGTATTGTTGCACAACAGCTGGTATGCAAATCTTAATTCATTTCCTCTGCGGTGTACTGTTTCACGTCCTTGACATGC ATAGTCTGTTAACCTGTTTCAATTTGGAAACTATCCCACCTGTGACTATTGCAGAAGTGCCTTACTTTTCCTACTAAATG CTCTCACAGTTTGGGACACATGCTTGATTAGAAGTACAAGCCTCACCAGCATAATTTCCTTTTACATAATTTTCTAGGTA GTCTTTCCATGGATTGTAGACCTTCTTTTCTGGATAGTTATTCAAGAAGTTATGACATTATGATGCTTGGCATGAAAATG TTTCAATATTATATTAAAAATTATTTTCACTTTATGTTACCTTTTCTAGTTCTGGTAATTGTTATAGTTTATCTTTGGCT GAGGAGAGATCAAAACAGAATTATGATTTTTTGGCAAACCCTATTTTTAAGCTTTGATCTGAATTGTCGCTGTAGGTTCT TATGGTGGAAAAATATTTTCCTCTATCCCTCAAATGCTTATCATTAAACAATGTGTCATACTTCTACAAACTAAACCACT GACTGAAGTGGGAGAATAAGTTTTCAATCAGAACGATAGTTGTTTTTCTCGCATATTCCTATTACTTTGTTTCTTTCAAC ATTTTGGATCTATCCTTGATTTTTCTTGTAACGTTCATCCAATTTCTTTGCTTGTCAATAACGTAGCATGCTTGTAAAAA ATTGATTGCCTTGTACATCTATGATGACTTCAGTAATCATTGCTAAAGTAGCTTGCATTTATATGGTTTGTTTACAGTAG TCTTTTTGTTTTTGTTGCGTATTATGTGTAGTATTTATCACCTACAAAATTTAACAGCCTTTTAAATGACTGTTCAGAGA CACTAGTTGAAGAAGGAAGAAAGTTTGATGCAGTTATGGCCTTGGAGGTACTCTCGTTCTGCCCCCTCTCTCTGGTTGTG TGCTTATACATTGTATTGCATAAATATGAGATACACACACATGCATGTAAAGAGAGAGAGGAGAAGGGTTTTGGGGGGTG GGGGTGTAAGAAGTGAGAGGTGGGGGAAGTTAATATTGACCATTCAGTTTTAGATATTTAGTTAAGATTAAGTTCTCCTA TGCTCTCATTATAGACGAAATATGCTTAATATTCCTGGATCACTGAGATACTTGGTTGAGTTGGCGTCCTTTTTTACAGA ATAACTCAAATAGAGGCTCTTTTTAAAATTTAATTTAGACACTGATACATTGTAACAATTGATCAAGATCATTTAGAGGT TTATCCAGCATTTGCTCTTTGAATTCTGATATCCACATTGTTTATCATGAATTTTACCAGGTAATTGAGCATGTTGCAGA TCCTGCAGAGTTCTGCAAATCTTTGTCAGCATTAACAATTTCAGATGGAGCTACTGTCATATCGACAATCAATCGCTCTA TGAGAGCCTATGCAACTGCCATTGTTGCTGCAGAATACATCCTCCGCTGGGTATTATTCTTAACTTCATTTCATAGTTTT TTTTATCCTCACATCCTGTTTAAGATCATGCACTGAAGTTTACTCCTTTTCATTTGAGGGTGCTCCTTGTGTTGGATCAT CTATACCATATACCATAACATCCATGTTGGCATGCACACTATATTTATAAAACATTGCACTTGCAATTGACATGAGCAAA TTGTTAACTCATTGATAAGATATCGACAGAGAGAGTACTACACTTGCTATGATGCACATTTAAAATTGGAAGGAAATAAA GGAAGTGATCCTTGTACTCTAAAATCAATGTCCAATGAAAAAATTTGCAATTAACATTACATTTGAAACTTGGCAGCTTC CTAGAGGCACGCATGACTGGTCAAGTTTTCTCACTCCAGGGGAACTAGTCCTGATCCTGCAACGCGCTGGTATCAATGTA AGCAAGATATGCATGCATTCACAAATAAACACCTTGATTACTTTTAATTTTATTTTTGTAATTTTGTTCACTAATTATAC CTTTCTGGTTGCACACACACAGGTGGAAGAGATGGCCGGATTTGTGTATAACCCCTTGACAGGACAATGGTCTTTGTCAG ATGATATCGGTGTCAATTTCATTGCCTTTGGTACCAAAACCAAAAGCACTGAATGATTAGGAAAAATATAATACTTACCA CTATAAATTGTTCATAGTAAATTTGTTTTGGCTGCTGAATAAACATTTGAATTAAAATAGAACGTCTCTTTTCTTTGACT TTACTTTTCTTACTCTCTTCACCCTCCTCATAACACAAACAAAACTGAGGGGGGTGAGGTTTGTGAAGGTGGTTTCTGCG GTTATAGAAGAAAGAAAGGAAAAGAGTGTGGTTTAATTCTAGGAATGAGAATGACAACTCCTAGAGCACCTGAAATTTGA TTTGAGGGGGCTCAGATCATTAGGTAGGGCTTTTAGGTAGAGGAAAGTGAAATTAAATGAATTTCGT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0450300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATCATCTCCGGAACCTGAACGGAATCACCAACCGCCGCATTCTCTCCAACGCTAGGTGCTTCTCCGGTGCAGCTAA AGAACACTCTTCCCTGAACCGCAATGAGCTCGCCAAGTTCGCTGCCATCGCTGAAACCTGGTGGGATTCTGAAGGCCCGT TTAAACCATTGCATGCTATGAATCCTACAAGACTTGCTTTCGTCCGGTCTGTGCTATGTCGGCATTTTAAGAAGGACCCT TATAGTGCTAAACCGCTTGAAGGACTTAAAATTGCTGATGTAGGTTGTGGAGGTGGAATTCTTTCTGAGCCCTTAGCTCG ATTGGGAGCTACAGTGACGGGCGTTGATGCTGTAGAGAAGAATATCAAGATTGCTCGACTTCATGCTGATTTGGATCCAA CAACTTCAACTATTGAGTATTGTTGCACAACAGCTGAGACACTAGTTGAAGAAGGAAGAAAGTTTGATGCAGTTATGGCC TTGGAGGTAATTGAGCATGTTGCAGATCCTGCAGAGTTCTGCAAATCTTTGTCAGCATTAACAATTTCAGATGGAGCTAC TGTCATATCGACAATCAATCGCTCTATGAGAGCCTATGCAACTGCCATTGTTGCTGCAGAATACATCCTCCGCTGGCTTC CTAGAGGCACGCATGACTGGTCAAGTTTTCTCACTCCAGGGGAACTAGTCCTGATCCTGCAACGCGCTGGTATCAATGTG GAAGAGATGGCCGGATTTGTGTATAACCCCTTGACAGGACAATGGTCTTTGTCAGATGATATCGGTGTCAATTTCATTGC CTTTGGTACCAAAACCAAAAGCACTGAATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0450300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNHLRNLNGITNRRILSNARCFSGAAKEHSSLNRNELAKFAAIAETWWDSEGPFKPLHAMNPTRLAFVRSVLCRHFKKDP YSAKPLEGLKIADVGCGGGILSEPLARLGATVTGVDAVEKNIKIARLHADLDPTTSTIEYCCTTAETLVEEGRKFDAVMA LEVIEHVADPAEFCKSLSALTISDGATVISTINRSMRAYATAIVAAEYILRWLPRGTHDWSSFLTPGELVLILQRAGINV EEMAGFVYNPLTGQWSLSDDIGVNFIAFGTKTKSTE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43464
29 271 243 7.9E-73 –
PANTHER
PTHR43464:SF19
29 271 243 7.9E-73 –
Gene3D
G3DSA:3.40.50.150
36 271 236 8.0E-67 –
Hamap
MF_00472
36 272 237 38.239
IPR010233
TIGRFAM
TIGR01983
36 266 231 1.6E-86
IPR010233
SUPERFAMILY
SSF53335
40 265 226 1.74E-37
IPR029063
Pfam
PF13489
90 242 153 7.5E-18 –
CDD
cd02440
90 169 80 7.93811E-8 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006744
Biological process Ubiquinone biosynthetic process The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
Subterm of
GO:0008425
Molecular function 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity Catalysis of the reaction: 2-polyprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0450300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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