Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0451800 |
| Transcript ID | LotjaGi2g1v0451800.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc knuckle (CCHC-type) family protein, putative; TAIR: AT5G43630.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q92541|RTF1_HUMAN RNA polymerase-associated protein RTF1 homolog; TrEMBL-Plants: tr|K7K5H3|K7K5H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0451800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94498338..94506937) extracted from Lotus japonicus Gifu genome v1.2.
TGCAGGAAAAAAACTCCAACTAAAATAGTTATCCCAATTCCCAACCAACGTGTGAATCTTCCCGGCTATATACGATAGGT TCAGTGAATAAAGAAGCAAGATATACTACTGCTACACTCTGCTAGTTAATTAATTCATGTCTCATAACGTGTAATGAATT ATCACTGTACGATATTCAAGAGTTACCAATTATACGTGGGTAGTCGATCATTGGCAAAGAATGTCTCCACGTGGCAGATC ATGAACCTCATGTAGCTGAATAACAGGTAAGCACCTTCATGTATCTGTTATGGCATGACGGCTGGCAGACATAACATGTC TTGCTACTGCTTGGTGCTTGCTATACTCCACTTTCTCTCTCTCACCACAATCTAAAAACGTTCTTTCTGCTCCACTTCCT CATATAGATAGTACTTGCCTCATCGTTTAGTGTGGATCAAACAAAACAGGTATGCATCATTTCTCACTCTCTTTTGTATT GCTACTGACCCTTTTGGAATGAATGACCTTTTCTATGTATGCCCAATGGAAGAAAGATTTTGACTTCATGTTATAGTCAA TTTATCCTTAGAAGATAGATACCTTGTACAAGGTTTATCTGTAACACATGCTTGAGTTGGGTGTGGATGTGAGGGCTATA ATAAGAAAACAGGCAGGGTAGAAACACTTTATGGTTGTTATTGGGGTCATGGGGTGTGGTTGATCCTAGGAAGAATCTAT TGGCTTGTGTTATCTTTGAAGTTTGTAGGATGGCATACAAGTTTTACTCATATTATCGTTATCCAAGATATGCCAACGAT GAATTCAGTCATGTTCATGTTTGGATACAGACTAAAGAGAATTACTTACTGAAGCTTATCTACTTGAAAAAGGTTCCTAT TAGTGCTCTTTGGTGGGCTTCCGAACGGACTCGAAACCTTTAATACCAAGAATATGTTCCATAGTTTGTTATTTTTCTTT CTCTTGTGTTTTTGCTGTTATGGCAGTAGTCAAATGTGTACAGACAGGAACTGCTGCACCTTCCAACTTAACCTTTTGTA CTGGTGGTCATTGTATTAGACTATCCTTGGTGAAATTATGTAGAATTGGATCCTCACTACTCCCATTCTTCTAATTGAAT TAATTTCAATTTCAGCACTAGGTGATGGTGATCCTATTCTTTGTCCATGCCTAATATTGCTAGTAACTTGGTAATTTCAG CAGAAGGAAACATGTTAGAGATGCAAACCATTCATATGCCAGTGCCTAATAACTTGGTCTTTTGGTATGAATTGTCCTTG ACACTGTTTTCAACTTCATCACATCCTGCATTTTTTATAATGCTTAAATTAACGCTAGTTGTTTTTCCCCATATAGGAGG AATAGGTAGAACAAATGTGTGTGTTCATGGTGTCTTCTAATAAGATGTATATCAGAAAACCAATTAATAAGTAACCCATA ATTCGGTCAAATAATTTGATGCTGGGCTTAGTGTTATGGAATTAGTTTACTTAACTTTACATTTTTATATATGCCCTGCA TTCCTAATTTTCATTTTAAGTGCTACATAGGAGGTTAATTCTGATTGTAATAACATTTCAGGAGTTTGTGAAGATTTTAT CCCTCTGAAGATGAGTGAAGAAAACGAGTTTAAATCAAATACTGATAATGAACATTTTCAAAATAATGCTAACCACTGCA TTTGGAAAATTTTGAAAAATGACCCGCGTGCAGGTGCAAATGCAGCTTCCAGGGTTGATCTGACATTTGCTGCCACTGAT CCCCTATCTGAGATAGTTTGGTCTCCTAGTAAAGGTTTGAGAATTCAATGTGCTGATTCAAGCTTTGCTGATCAGAGTAG TTATCTTTTTCGGGATGTTGGACCAAGCTGTATGGTTCTTTCTCCACCACAAAGTGTAACTGGCGGCAGGCTTACCGCTG ATGAACCTGTGGGTGATGTTCTTGTAAAACCTATAGCTGTCATATGTACCAACAGTGATATTGCTGCAACATATGCTTCT ACTATGAATCCAACTACTGATTCAGGTGTCAACCCTGAGTGTAAAGTATATGAAGAAAATGATATAGGTAATGACAGAAT CTTCTTGCTCATCCCCTATAGATGCATGGAAAGGGGGTTTACTGTAAACTTTTAGGCTTTAATAAACCTTATTGAAGGAC AAAGAAATGCACCAGTTATCTTAATTAGTTGAATGGCTTATTGGGAATTATGATCTTGCTTAGTTTCTTACCAGTCACTT TTTCCTGGAATCATTTTTCTCAATCATACAGAACTCTTATCTGGCAGGAGCTGGATCTAGTGGTAATAAGGAGGAAATGA ACACTTCAGAAAGAGCACCTAATTTGTCTAATGATCAAAATGAGAATCTAGCAAATGATTGGGAGAAGAGTACTGGTGGT GATCAAGCCAAGATTGGAACTGATCAAATATCTGGGACAACGGGAAACAAATTTTCTGCTATTTCAGGTATGTGTTGTCA TCAAGGTAGTTAAGAGGCAAAATCCTCCCTTGTGGTACTGAGTTTTAATGCCTTAGGCAAGAGCTTCCAAAAAGCGAATG CATTAGTAAAGGTGTTAACGCTAAAAAATTAAAATAGTAAAATAATTGACTATTATGCATTGACTTTGCTTATAAGTTAA CTATTCAAGCATAAAGTTTGTAGTAAAAATAGAAAAGGTTATGATGTTCAATTTACAAAGTCCTAAGCTGTTGGTAAGAG TTGACAACTAGTTATTCTTTTGACATGTAGATTACTTTTACACCCTTTAGTATCACAGGTGTCATGTTAGATTGCTGGTC TTAGACTTATTCAGTAGTTATTTAGCAAGGTGAGCTCCTGTAATATCACAGTTGGCTTAGTCTAACTTCTTGTCTCAGCA CCTTTGGTGCATCCTTTGGCGCCTTTTAGTCCTGCAATGATATGAATTCAAGCATTTTAGGATGAGGAATGCTAGCAACA CACTCTTTTGAACATGCTCTCCAACAAACTCCATGTGATTGGTTTATTTGTTCAAAAGTCTAACACATTTTCCGAACTTT TTAAAAAATGTGTTGACTTTTTTAAAAATAAGTCAATCACGTAGTGTGTTGAAAAGGCTGTGTTGCTAGGGCTCTTATCT CAGGATACCTTTTAGGCTCTTACTCATTGTTGGAAGTTGGAACACATTATAATTTGTTTGATATTTGTTACTTCTTTTTT ATCTGTATAAAAGGAAAGAATAGCTGATAGTTTACAGGTTGTTAATCTAAATACATAGATTCCATAATTTAAAACATATC CTTTATGTTTAGAGCATAATTTATTGCACATTTTTTGTTTAAGAAAATTCTTCTTTTTGTGCATGCCTGAAATGTGTTAT GCATCCTGATTTTCCTGCAGGTCATGTTGACCAAAGGCCATTTGATGCTTTATTACTTCAATCAGATGAAGCTAAACCTA CCATGGAGCGAAATCCTTCACCAGGGAGACCCTCCATTGGAGGTGTAGATATTGGTACTGGAAAAAAGGCAGTTGTAGAA GATGATTTACATGCTACTGTTGAGCCTATAATTCCAGGAGCTAATGTAACATCCTCCGGCAAGAGTCCTTTAGAAAAATC GGAATCTAGTGCTGAGAATGATATACAACCTGTCAACTGCAATGCTGCATGTCCTGCGACAAGCGGAGTTATTGCTAATG AGATTAAAAACAAATCTCATGACAAAAAAATGATTCTATTATGTGATAAAATTCTTCCAGTTATGCATTCTCCATGTAAT AGCAGAATTAATATGTCAAGAAACAAAGGCAAGGAAAAGTCCTTATCAGACGGTGATGCAAATGTAAGATTATCAAAGGA GGAGAATGACAGTCAATCAAGTGTTGAAAGCTGTAACAGTACTGAGTTTTTTCCCAAGGGTAAGAAGAGACCTAACTTTC AACAGCAGTTGATTCTTGGGAGTAAAAGAGTGAAGAAAAAGCACGTTGAAGAAACTTCTGGTTCCAAATCCTATGTTAAA AAGGATATTTCATTCATTAACTGGATATCAAACATGGTAAAAGGACTCTCACATTCAATTCAAAATGGTTCAAACACTTT GGCTGTTACTCTCGCAAATCGAGATTATCATGATCTACGGCGGCCTGATGAGAAACTTGTCACATGCAAAATGAGTCAAG ATCCTGGGCCAAAAAATACAGGATTCAAGTCCATTTTTCAGTCCATGTATTGTTCAAGTTTGAAGAATGTAGGAACAAGA ACTTTTCGTCAAGAAGGAGAGGGTAGTGAGGATTTAGAGCCAAGTAACATGGTACAGGGAATTGATGCTACTCCAATAAC CTGTTGTGCAGAGAAAAACAGCTCTTCTGAAGCATGTACTCGGAGATATGATGCTGGTCCGTCCTCGCAGCCTATGATTA TTCATGCAAATATTTTTAACAGTCAGGAAAGCAGCAAAAACAACCCAGTTGAGGATGAAAATTGTTCCATCTTAGGCCTT ATAAAGGAGAAGGAAACAATGGCATCAAATTCATCTTCATCCAGACAAAATACAAATAATACTGAGAATATTGATTCCAC TGCACCATCTGAGAGAAAGGAAGCAGACAATATCTGTCTTGGAAGAGATGCTCCAGGAAATATGTGGATAACTCGATTTT CTCCAAAATCGACTGCACCCTTGGTTATTTCTGATCACCTAGATGAGAGATATGAATCTCAAGTCCACATCAATGATTGC CATAAACACATTTCGTATATGAAGAAAAACTGTAGAATTGAAGAAACTAGAGAACAACCCGCTAATGCCACAGAGGCTTT CACTGGTCTTCATGAAGATAAGGACAATAATGTCCATAATAATTTCAACAGCCTTTCATCTTCCCCAGGATTCAGAAACT CTGTACTGATGACTTCAATGTTTGCAAGGAGATTTGGTGCCATCAAACATACCACACCGACAAACAAAGCAGATTGTACC TCTCAGGTAGTTCTGTTTTGTTTGTTTTGTGGGACAAGAGGTCACCAACTCTGTGATTGCTCAGAAATTGCGGAAGGCGA GCTAGAAGATCTCCAAAAGAATATGAATTCATATGGAGAATTGGAAGGAAGTCCCTGTATATGCATTAAATGTTTTCAGA CTAACCACTGGGCAATTTCATGTCCTACTTCAATCTCAAAAAGGAAACATGAATGGGAAGTTAAACCCTTGGTCAATGAT TGCATTCTTAGCGGAGAACATTTAATCCCAAGCATTGAAGGGAGTTCAAGGTTTCTGAGTGGTAAGGCTGGCCTAATTTT ATCCGGTGGTACTATCAACGATGGAAGTGATCACCAAGCAAATCAGAATATTAATTTGAAGCGGAAATTAAATGAAAAGA CAACCTTCAAGATAGGTTGCAGTGCATCATTCAAGAAACAATGCAGTTCAAGTTCAGAGGAAAACAAATTCAAAGGAAAT CCAATAACATCTCCATCCAGATTGACTGGAAGGCAGATTTCACACATACCAAAAGGAATCTTTGATGCAGTGAAAAAGCT TCGATTGTCCCGCACTGACATCTTGAGGTAATAATGCAAGACGACTAACTAATACTATGTCATTCATGTAAAAAAGCTAG TTGTTGTGTGGTTTATGGCCCGTTTATAAACTGTAAGTAACCTATGATAATTGCTAAATTACATAAGGTTGAAAATAATT CTTCTCAACCCAAGAATTTATGCTTAAATCATAGTGAATTGGTATATGGTAGAGGTCAGATTTTGAAACCATAGTTTTCA GTTGTTCACAATTTTATTTTCCCGGGTTTGGTAGCTTTTCATGAAAGGAACCACTAGGCCTGCAAGGCTTGCACAATCTG GTTAAACAAACATTCAAAAAAACAATATTCATTAGAGGGGAAATCTTTCTAAACTAGATTTGTAAGTATATTGATCTAGA GTGCTGCTTTATGGCTTGAATTTGTTTTATCATTAGGCCGCCCTTGACTCCTCCTTTCTCATATATATGATCATATGGAC CCCTTCAGGGGCGGAGCCAGTATTTTAGTTAGGGGGAGCAAGATTAAAGAGCTGACAAAATATTTTGGATTAAATATACT TTTCATCCATGTAAAATTGAGACATTAGGGTTTTAGTCACAATTAAAATTTCATCTGTTAAGACAATTGAATAAACACAG AAAAGTAGGTTAGTTTTTTATAGACACAGTAAAGTATTTATTTACAAATACTGCTTATGCCTCTTTATTTGATAGGGCAA GAGCCTCTATTTTGCTAATTTTCCTGGCTGGTAAAGTATTAACTGAAAACAAAAGGAACAATGAACATAACTTGTGTCTA AAAATAGGCAGAGACCTTATCTAAAAATACTGTACTTTTCTCACTTATAAAACACTTGGATCTGTGACTTTTACTGAACA GAATGTCCTTTACATTAGATGGATAAATGCTGATCGGTCAAAACTTGATGGTTTTTTCTTGCGCCTGCGGCTTGGGAAGT GGGAAGAAGGGCTAGGTGGAACTGGATACCATGTGGCATATATAAATGGTATAACTAAAATCACAACTTATTCTTTGAAT GTGAAATATGCATGAATTAAGTTACTTTACCTCATTATGGATATCCCTGGAGTTTTTCATTGGTTTGATGAGACTATTGG CGGCTAGTGTTTTATTTTTATTATTTTGTTGGCTTTTTCTTATTTTCTTGTTCTCCTGTATGAACAGAGACCGAAACACA TAGTTCAGAGCAGAATATAAGAAAATCTCTCTCAGTGAAAATGGGGGGGATCAAGTGTATGGTCCAAACTCAGTATATAT CCAATCATGATTTTCTTGAGGTAATAATCAATTCTCATTTCTTAGTTGAGCTTGAGCAATTCTTGTTATAGCATAGTCTG TGCAAGCATAACCAATCAAAAGCTCATTATGCATTAAGATAAAAGACATAGAAACTTCTGCTGAAATTATTTGAATATTA TTGTGTTTTGATTGGTTGTGCCTATAAAGTATAATATAAGCATGCATTGTGCTCATGTGAGAATTGCTCTTATTACTTTT CCCTTGTTTCTTATTGTGTACCTATTGTTATTTAAGCTTTTAGTTTTCATGTCCATTTTGACTTGATTAATGATTTGATT GGAAGCCGAAAGAAAATGTGAAGATAGAAAATGGATGGAAAGAAAAATGTGGAAAAGAGAAAATGTAAATGAAATTAAAT AAGATTTTTTTTTGTTACAAGGACCCCGGTTACACCCCGGAAAATAAGATGATCTTATATGTCTAGATGGAGGAAAAAAT TAAAGAAAAAAAAGGGGAAACTTCATTTATCTTCCTTGGATGGATGAAATAGTGAGAGGATAGAAATATTATATTGAATG AACTTTATATTCTTTTGAGATAATAGTGAGTAGGTGGATAGATTTATATCTCAATATAATTATCCTTCTATCTCTGTTTC TTCTTATGAGTGTGGAGAAAAAATTAATGTAAATCCCTTTTTTTTTATCTTCCCTGTATTTTATTTCTATTTATAACTAA ACAAAAGAAATTGGTATTGGTGCATGTTTGGATTGAAATTAAGATGGGTTTTAATGGAGTTTTGCAGCTTTCCTCGGTGA AAAAGCCAATGGATCAAAGTTACTGGATTAGGATGAAAATTGCTTTTTCTTAACTTCCATTACACGGAATGTGTTTCCAA ACACAATAATTTTCTCATTTGTCTCGTTTTATGCAGGAAGAAATCATGGAATGGTGGTCTACCAGCTCAGAAGCTGGTGT TCAGATTCCATCAGAAGAAGAGCTGATAAAGAAACTTAAGATGAAAAGAATGTTAGGTCTGTAGAAATTTATTAAGTGTA TATATAAGTAATTACCACATAAGCATTTTGTTCTCTCTCTTTTATATTAGGATGGTAGGATATATTCAGTTTGGGGAAGT TTTCTTAATTTTTTCACTAATAATTATAAACATATTTTTATTTTTAAAGATTTATGTAAAAAACAACAGTGATTCGATTT AAAGGAATTATATATTTATTCATCCAATCACATAAATAATTCATTTGACAGTTTTTTGGTTGTAAGTTTATTAGTTTAAT TTTGTTATTGTTAGTTTCAGCTTAATTGATTATACGCATTTTCTGCATTTGACACCATAAATAAGAGAATAATTATATCT TCACACCTCATTTTTGAGGTGTAGAAAGGTGGAGGAAGAGAGATAGAGAGAAATGAGAGAGAAAGTGAAGATGTGATATG TGATTTGATTGATAGAGAAAAAAGAAATAAATAGAAATAAAAGTGAAAAAGGAGGGGAGAGGTGTGTATATATCATAACT GTCAATAAGACGGTAACAAATGTTTGATCCTATAGTATGTTTTTTCGTACATCAAAATTAGAGGAAGGTGTTTTCAAATG TTTTAGTACATATTTATTTCCAATAATATTTTACAATTTTATTTAATAAAAATGCGAGTGAACATCTTTCCTAAACATAA ATCATGTCCGAGATTTTATTTACATAACTTATATCAAATACAGAAATTTGTATTCTCATATTAAATTAAAAAAAAAAAAA CTTTTAAGATATCTTAAAATAACGCAATCCTAGAATGCCT
CDS sequence (LotjaGi2g1v0451800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTTTCTCCACCACAAAGTGTAACTGGCGGCAGGCTTACCGCTGATGAACCTGTGGGTGATGTTCTTGTAAAACC TATAGCTGTCATATGTACCAACAGTGATATTGCTGCAACATATGCTTCTACTATGAATCCAACTACTGATTCAGGTGTCA ACCCTGAGTGTAAAGTATATGAAGAAAATGATATAGGAGCTGGATCTAGTGGTAATAAGGAGGAAATGAACACTTCAGAA AGAGCACCTAATTTGTCTAATGATCAAAATGAGAATCTAGCAAATGATTGGGAGAAGAGTACTGGTGGTGATCAAGCCAA GATTGGAACTGATCAAATATCTGGGACAACGGGAAACAAATTTTCTGCTATTTCAGGTCATGTTGACCAAAGGCCATTTG ATGCTTTATTACTTCAATCAGATGAAGCTAAACCTACCATGGAGCGAAATCCTTCACCAGGGAGACCCTCCATTGGAGGT GTAGATATTGGTACTGGAAAAAAGGCAGTTGTAGAAGATGATTTACATGCTACTGTTGAGCCTATAATTCCAGGAGCTAA TGTAACATCCTCCGGCAAGAGTCCTTTAGAAAAATCGGAATCTAGTGCTGAGAATGATATACAACCTGTCAACTGCAATG CTGCATGTCCTGCGACAAGCGGAGTTATTGCTAATGAGATTAAAAACAAATCTCATGACAAAAAAATGATTCTATTATGT GATAAAATTCTTCCAGTTATGCATTCTCCATGTAATAGCAGAATTAATATGTCAAGAAACAAAGGCAAGGAAAAGTCCTT ATCAGACGGTGATGCAAATGTAAGATTATCAAAGGAGGAGAATGACAGTCAATCAAGTGTTGAAAGCTGTAACAGTACTG AGTTTTTTCCCAAGGGTAAGAAGAGACCTAACTTTCAACAGCAGTTGATTCTTGGGAGTAAAAGAGTGAAGAAAAAGCAC GTTGAAGAAACTTCTGGTTCCAAATCCTATGTTAAAAAGGATATTTCATTCATTAACTGGATATCAAACATGGTAAAAGG ACTCTCACATTCAATTCAAAATGGTTCAAACACTTTGGCTGTTACTCTCGCAAATCGAGATTATCATGATCTACGGCGGC CTGATGAGAAACTTGTCACATGCAAAATGAGTCAAGATCCTGGGCCAAAAAATACAGGATTCAAGTCCATTTTTCAGTCC ATGTATTGTTCAAGTTTGAAGAATGTAGGAACAAGAACTTTTCGTCAAGAAGGAGAGGGTAGTGAGGATTTAGAGCCAAG TAACATGGTACAGGGAATTGATGCTACTCCAATAACCTGTTGTGCAGAGAAAAACAGCTCTTCTGAAGCATGTACTCGGA GATATGATGCTGGTCCGTCCTCGCAGCCTATGATTATTCATGCAAATATTTTTAACAGTCAGGAAAGCAGCAAAAACAAC CCAGTTGAGGATGAAAATTGTTCCATCTTAGGCCTTATAAAGGAGAAGGAAACAATGGCATCAAATTCATCTTCATCCAG ACAAAATACAAATAATACTGAGAATATTGATTCCACTGCACCATCTGAGAGAAAGGAAGCAGACAATATCTGTCTTGGAA GAGATGCTCCAGGAAATATGTGGATAACTCGATTTTCTCCAAAATCGACTGCACCCTTGGTTATTTCTGATCACCTAGAT GAGAGATATGAATCTCAAGTCCACATCAATGATTGCCATAAACACATTTCGTATATGAAGAAAAACTGTAGAATTGAAGA AACTAGAGAACAACCCGCTAATGCCACAGAGGCTTTCACTGGTCTTCATGAAGATAAGGACAATAATGTCCATAATAATT TCAACAGCCTTTCATCTTCCCCAGGATTCAGAAACTCTGTACTGATGACTTCAATGTTTGCAAGGAGATTTGGTGCCATC AAACATACCACACCGACAAACAAAGCAGATTGTACCTCTCAGGTAGTTCTGTTTTGTTTGTTTTGTGGGACAAGAGGTCA CCAACTCTGTGATTGCTCAGAAATTGCGGAAGGCGAGCTAGAAGATCTCCAAAAGAATATGAATTCATATGGAGAATTGG AAGGAAGTCCCTGTATATGCATTAAATGTTTTCAGACTAACCACTGGGCAATTTCATGTCCTACTTCAATCTCAAAAAGG AAACATGAATGGGAAGTTAAACCCTTGGTCAATGATTGCATTCTTAGCGGAGAACATTTAATCCCAAGCATTGAAGGGAG TTCAAGGTTTCTGAGTGGTAAGGCTGGCCTAATTTTATCCGGTGGTACTATCAACGATGGAAGTGATCACCAAGCAAATC AGAATATTAATTTGAAGCGGAAATTAAATGAAAAGACAACCTTCAAGATAGGTTGCAGTGCATCATTCAAGAAACAATGC AGTTCAAGTTCAGAGGAAAACAAATTCAAAGGAAATCCAATAACATCTCCATCCAGATTGACTGGAAGGCAGATTTCACA CATACCAAAAGGAATCTTTGATGCAGTGAAAAAGCTTCGATTGTCCCGCACTGACATCTTGAGATGGATAAATGCTGATC GGTCAAAACTTGATGGTTTTTTCTTGCGCCTGCGGCTTGGGAAGTGGGAAGAAGGGCTAGGTGGAACTGGATACCATGTG GCATATATAAATGAGACCGAAACACATAGTTCAGAGCAGAATATAAGAAAATCTCTCTCAGTGAAAATGGGGGGGATCAA GTGTATGGTCCAAACTCAGTATATATCCAATCATGATTTTCTTGAGGAAGAAATCATGGAATGGTGGTCTACCAGCTCAG AAGCTGGTGTTCAGATTCCATCAGAAGAAGAGCTGATAAAGAAACTTAAGATGAAAAGAATGTTAGGTCTGTAG
Protein sequence (LotjaGi2g1v0451800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLSPPQSVTGGRLTADEPVGDVLVKPIAVICTNSDIAATYASTMNPTTDSGVNPECKVYEENDIGAGSSGNKEEMNTSE RAPNLSNDQNENLANDWEKSTGGDQAKIGTDQISGTTGNKFSAISGHVDQRPFDALLLQSDEAKPTMERNPSPGRPSIGG VDIGTGKKAVVEDDLHATVEPIIPGANVTSSGKSPLEKSESSAENDIQPVNCNAACPATSGVIANEIKNKSHDKKMILLC DKILPVMHSPCNSRINMSRNKGKEKSLSDGDANVRLSKEENDSQSSVESCNSTEFFPKGKKRPNFQQQLILGSKRVKKKH VEETSGSKSYVKKDISFINWISNMVKGLSHSIQNGSNTLAVTLANRDYHDLRRPDEKLVTCKMSQDPGPKNTGFKSIFQS MYCSSLKNVGTRTFRQEGEGSEDLEPSNMVQGIDATPITCCAEKNSSSEACTRRYDAGPSSQPMIIHANIFNSQESSKNN PVEDENCSILGLIKEKETMASNSSSSRQNTNNTENIDSTAPSERKEADNICLGRDAPGNMWITRFSPKSTAPLVISDHLD ERYESQVHINDCHKHISYMKKNCRIEETREQPANATEAFTGLHEDKDNNVHNNFNSLSSSPGFRNSVLMTSMFARRFGAI KHTTPTNKADCTSQVVLFCLFCGTRGHQLCDCSEIAEGELEDLQKNMNSYGELEGSPCICIKCFQTNHWAISCPTSISKR KHEWEVKPLVNDCILSGEHLIPSIEGSSRFLSGKAGLILSGGTINDGSDHQANQNINLKRKLNEKTTFKIGCSASFKKQC SSSSEENKFKGNPITSPSRLTGRQISHIPKGIFDAVKKLRLSRTDILRWINADRSKLDGFFLRLRLGKWEEGLGGTGYHV AYINETETHSSEQNIRKSLSVKMGGIKCMVQTQYISNHDFLEEEIMEWWSTSSEAGVQIPSEEELIKKLKMKRMLGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 956 | 956 | 1.3E-226 | – | |
| PANTHER | 1 | 956 | 956 | 1.3E-226 | – | |
| MobiDBLite | 62 | 126 | 65 | - | – | |
| MobiDBLite | 70 | 124 | 55 | - | – | |
| MobiDBLite | 142 | 164 | 23 | - | – | |
| MobiDBLite | 184 | 206 | 23 | - | – | |
| MobiDBLite | 255 | 293 | 39 | - | – | |
| MobiDBLite | 258 | 282 | 25 | - | – | |
| MobiDBLite | 498 | 518 | 21 | - | – | |
| MobiDBLite | 498 | 531 | 34 | - | – | |
| SMART | 658 | 674 | 17 | 2.8 | ||
| Coils | 673 | 693 | 21 | - | – | |
| SMART | 699 | 715 | 17 | 0.11 | ||
| Gene3D | 829 | 953 | 125 | 2.4E-13 | ||
| SMART | 833 | 934 | 102 | 1.9E-11 | ||
| SUPERFAMILY | 833 | 951 | 119 | 7.98E-18 | ||
| Pfam | 836 | 931 | 96 | 1.6E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi2g1v0451800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…