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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0451800 |
| Transcript ID | LotjaGi2g1v0451800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc knuckle (CCHC-type) family protein, putative; TAIR: AT5G43630.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q92541|RTF1_HUMAN RNA polymerase-associated protein RTF1 homolog; TrEMBL-Plants: tr|K7K5H3|K7K5H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0451800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94498465..94506370) extracted from Lotus japonicus Gifu genome v1.2.
AATTAATTCATGTCTCATAACGTGTAATGAATTATCACTGTACGATATTCAAGAGTTACCAATTATACGTGGGTAGTCGA TCATTGGCAAAGAATGTCTCCACGTGGCAGATCATGAACCTCATGTAGCTGAATAACAGGTAAGCACCTTCATGTATCTG TTATGGCATGACGGCTGGCAGACATAACATGTCTTGCTACTGCTTGGTGCTTGCTATACTCCACTTTCTCTCTCTCACCA CAATCTAAAAACGTTCTTTCTGCTCCACTTCCTCATATAGATAGTACTTGCCTCATCGTTTAGTGTGGATCAAACAAAAC AGGTATGCATCATTTCTCACTCTCTTTTGTATTGCTACTGACCCTTTTGGAATGAATGACCTTTTCTATGTATGCCCAAT GGAAGAAAGATTTTGACTTCATGTTATAGTCAATTTATCCTTAGAAGATAGATACCTTGTACAAGGTTTATCTGTAACAC ATGCTTGAGTTGGGTGTGGATGTGAGGGCTATAATAAGAAAACAGGCAGGGTAGAAACACTTTATGGTTGTTATTGGGGT CATGGGGTGTGGTTGATCCTAGGAAGAATCTATTGGCTTGTGTTATCTTTGAAGTTTGTAGGATGGCATACAAGTTTTAC TCATATTATCGTTATCCAAGATATGCCAACGATGAATTCAGTCATGTTCATGTTTGGATACAGACTAAAGAGAATTACTT ACTGAAGCTTATCTACTTGAAAAAGGTTCCTATTAGTGCTCTTTGGTGGGCTTCCGAACGGACTCGAAACCTTTAATACC AAGAATATGTTCCATAGTTTGTTATTTTTCTTTCTCTTGTGTTTTTGCTGTTATGGCAGTAGTCAAATGTGTACAGACAG GAACTGCTGCACCTTCCAACTTAACCTTTTGTACTGGTGGTCATTGTATTAGACTATCCTTGGTGAAATTATGTAGAATT GGATCCTCACTACTCCCATTCTTCTAATTGAATTAATTTCAATTTCAGCACTAGGTGATGGTGATCCTATTCTTTGTCCA TGCCTAATATTGCTAGTAACTTGGTAATTTCAGCAGAAGGAAACATGTTAGAGATGCAAACCATTCATATGCCAGTGCCT AATAACTTGGTCTTTTGGTATGAATTGTCCTTGACACTGTTTTCAACTTCATCACATCCTGCATTTTTTATAATGCTTAA ATTAACGCTAGTTGTTTTTCCCCATATAGGAGGAATAGGTAGAACAAATGTGTGTGTTCATGGTGTCTTCTAATAAGATG TATATCAGAAAACCAATTAATAAGTAACCCATAATTCGGTCAAATAATTTGATGCTGGGCTTAGTGTTATGGAATTAGTT TACTTAACTTTACATTTTTATATATGCCCTGCATTCCTAATTTTCATTTTAAGTGCTACATAGGAGGTTAATTCTGATTG TAATAACATTTCAGGAGTTTGTGAAGATTTTATCCCTCTGAAGATGAGTGAAGAAAACGAGTTTAAATCAAATACTGATA ATGAACATTTTCAAAATAATGCTAACCACTGCATTTGGAAAATTTTGAAAAATGACCCGCGTGCAGGTGCAAATGCAGCT TCCAGGGTTGATCTGACATTTGCTGCCACTGATCCCCTATCTGAGATAGTTTGGTCTCCTAGTAAAGGTTTGAGAATTCA ATGTGCTGATTCAAGCTTTGCTGATCAGAGTAGTTATCTTTTTCGGGATGTTGGACCAAGCTGTATGGTTCTTTCTCCAC CACAAAGTGTAACTGGCGGCAGGCTTACCGCTGATGAACCTGTGGGTGATGTTCTTGTAAAACCTATAGCTGTCATATGT ACCAACAGTGATATTGCTGCAACATATGCTTCTACTATGAATCCAACTACTGATTCAGGTGTCAACCCTGAGTGTAAAGT ATATGAAGAAAATGATATAGGTAATGACAGAATCTTCTTGCTCATCCCCTATAGATGCATGGAAAGGGGGTTTACTGTAA ACTTTTAGGCTTTAATAAACCTTATTGAAGGACAAAGAAATGCACCAGTTATCTTAATTAGTTGAATGGCTTATTGGGAA TTATGATCTTGCTTAGTTTCTTACCAGTCACTTTTTCCTGGAATCATTTTTCTCAATCATACAGAACTCTTATCTGGCAG GAGCTGGATCTAGTGGTAATAAGGAGGAAATGAACACTTCAGAAAGAGCACCTAATTTGTCTAATGATCAAAATGAGAAT CTAGCAAATGATTGGGAGAAGAGTACTGGTGGTGATCAAGCCAAGATTGGAACTGATCAAATATCTGGGACAACGGGAAA CAAATTTTCTGCTATTTCAGGTATGTGTTGTCATCAAGGTAGTTAAGAGGCAAAATCCTCCCTTGTGGTACTGAGTTTTA ATGCCTTAGGCAAGAGCTTCCAAAAAGCGAATGCATTAGTAAAGGTGTTAACGCTAAAAAATTAAAATAGTAAAATAATT GACTATTATGCATTGACTTTGCTTATAAGTTAACTATTCAAGCATAAAGTTTGTAGTAAAAATAGAAAAGGTTATGATGT TCAATTTACAAAGTCCTAAGCTGTTGGTAAGAGTTGACAACTAGTTATTCTTTTGACATGTAGATTACTTTTACACCCTT TAGTATCACAGGTGTCATGTTAGATTGCTGGTCTTAGACTTATTCAGTAGTTATTTAGCAAGGTGAGCTCCTGTAATATC ACAGTTGGCTTAGTCTAACTTCTTGTCTCAGCACCTTTGGTGCATCCTTTGGCGCCTTTTAGTCCTGCAATGATATGAAT TCAAGCATTTTAGGATGAGGAATGCTAGCAACACACTCTTTTGAACATGCTCTCCAACAAACTCCATGTGATTGGTTTAT TTGTTCAAAAGTCTAACACATTTTCCGAACTTTTTAAAAAATGTGTTGACTTTTTTAAAAATAAGTCAATCACGTAGTGT GTTGAAAAGGCTGTGTTGCTAGGGCTCTTATCTCAGGATACCTTTTAGGCTCTTACTCATTGTTGGAAGTTGGAACACAT TATAATTTGTTTGATATTTGTTACTTCTTTTTTATCTGTATAAAAGGAAAGAATAGCTGATAGTTTACAGGTTGTTAATC TAAATACATAGATTCCATAATTTAAAACATATCCTTTATGTTTAGAGCATAATTTATTGCACATTTTTTGTTTAAGAAAA TTCTTCTTTTTGTGCATGCCTGAAATGTGTTATGCATCCTGATTTTCCTGCAGGTCATGTTGACCAAAGGCCATTTGATG CTTTATTACTTCAATCAGATGAAGCTAAACCTACCATGGAGCGAAATCCTTCACCAGGGAGACCCTCCATTGGAGGTGTA GATATTGGTACTGGAAAAAAGGCAGTTGTAGAAGATGATTTACATGCTACTGTTGAGCCTATAATTCCAGGAGCTAATGT AACATCCTCCGGCAAGAGTCCTTTAGAAAAATCGGAATCTAGTGCTGAGAATGATATACAACCTGTCAACTGCAATGCTG CATGTCCTGCGACAAGCGGAGTTATTGCTAATGAGATTAAAAACAAATCTCATGACAAAAAAATGATTCTATTATGTGAT AAAATTCTTCCAGTTATGCATTCTCCATGTAATAGCAGAATTAATATGTCAAGAAACAAAGGCAAGGAAAAGTCCTTATC AGACGGTGATGCAAATGTAAGATTATCAAAGGAGGAGAATGACAGTCAATCAAGTGTTGAAAGCTGTAACAGTACTGAGT TTTTTCCCAAGGGTAAGAAGAGACCTAACTTTCAACAGCAGTTGATTCTTGGGAGTAAAAGAGTGAAGAAAAAGCACGTT GAAGAAACTTCTGGTTCCAAATCCTATGTTAAAAAGGATATTTCATTCATTAACTGGATATCAAACATGGTAAAAGGACT CTCACATTCAATTCAAAATGGTTCAAACACTTTGGCTGTTACTCTCGCAAATCGAGATTATCATGATCTACGGCGGCCTG ATGAGAAACTTGTCACATGCAAAATGAGTCAAGATCCTGGGCCAAAAAATACAGGATTCAAGTCCATTTTTCAGTCCATG TATTGTTCAAGTTTGAAGAATGTAGGAACAAGAACTTTTCGTCAAGAAGGAGAGGGTAGTGAGGATTTAGAGCCAAGTAA CATGGTACAGGGAATTGATGCTACTCCAATAACCTGTTGTGCAGAGAAAAACAGCTCTTCTGAAGCATGTACTCGGAGAT ATGATGCTGGTCCGTCCTCGCAGCCTATGATTATTCATGCAAATATTTTTAACAGTCAGGAAAGCAGCAAAAACAACCCA GTTGAGGATGAAAATTGTTCCATCTTAGGCCTTATAAAGGAGAAGGAAACAATGGCATCAAATTCATCTTCATCCAGACA AAATACAAATAATACTGAGAATATTGATTCCACTGCACCATCTGAGAGAAAGGAAGCAGACAATATCTGTCTTGGAAGAG ATGCTCCAGGAAATATGTGGATAACTCGATTTTCTCCAAAATCGACTGCACCCTTGGTTATTTCTGATCACCTAGATGAG AGATATGAATCTCAAGTCCACATCAATGATTGCCATAAACACATTTCGTATATGAAGAAAAACTGTAGAATTGAAGAAAC TAGAGAACAACCCGCTAATGCCACAGAGGCTTTCACTGGTCTTCATGAAGATAAGGACAATAATGTCCATAATAATTTCA ACAGCCTTTCATCTTCCCCAGGATTCAGAAACTCTGTACTGATGACTTCAATGTTTGCAAGGAGATTTGGTGCCATCAAA CATACCACACCGACAAACAAAGCAGATTGTACCTCTCAGGTAGTTCTGTTTTGTTTGTTTTGTGGGACAAGAGGTCACCA ACTCTGTGATTGCTCAGAAATTGCGGAAGGCGAGCTAGAAGATCTCCAAAAGAATATGAATTCATATGGAGAATTGGAAG GAAGTCCCTGTATATGCATTAAATGTTTTCAGACTAACCACTGGGCAATTTCATGTCCTACTTCAATCTCAAAAAGGAAA CATGAATGGGAAGTTAAACCCTTGGTCAATGATTGCATTCTTAGCGGAGAACATTTAATCCCAAGCATTGAAGGGAGTTC AAGGTTTCTGAGTGGTAAGGCTGGCCTAATTTTATCCGGTGGTACTATCAACGATGGAAGTGATCACCAAGCAAATCAGA ATATTAATTTGAAGCGGAAATTAAATGAAAAGACAACCTTCAAGATAGGTTGCAGTGCATCATTCAAGAAACAATGCAGT TCAAGTTCAGAGGAAAACAAATTCAAAGGAAATCCAATAACATCTCCATCCAGATTGACTGGAAGGCAGATTTCACACAT ACCAAAAGGAATCTTTGATGCAGTGAAAAAGCTTCGATTGTCCCGCACTGACATCTTGAGGTAATAATGCAAGACGACTA ACTAATACTATGTCATTCATGTAAAAAAGCTAGTTGTTGTGTGGTTTATGGCCCGTTTATAAACTGTAAGTAACCTATGA TAATTGCTAAATTACATAAGGTTGAAAATAATTCTTCTCAACCCAAGAATTTATGCTTAAATCATAGTGAATTGGTATAT GGTAGAGGTCAGATTTTGAAACCATAGTTTTCAGTTGTTCACAATTTTATTTTCCCGGGTTTGGTAGCTTTTCATGAAAG GAACCACTAGGCCTGCAAGGCTTGCACAATCTGGTTAAACAAACATTCAAAAAAACAATATTCATTAGAGGGGAAATCTT TCTAAACTAGATTTGTAAGTATATTGATCTAGAGTGCTGCTTTATGGCTTGAATTTGTTTTATCATTAGGCCGCCCTTGA CTCCTCCTTTCTCATATATATGATCATATGGACCCCTTCAGGGGCGGAGCCAGTATTTTAGTTAGGGGGAGCAAGATTAA AGAGCTGACAAAATATTTTGGATTAAATATACTTTTCATCCATGTAAAATTGAGACATTAGGGTTTTAGTCACAATTAAA ATTTCATCTGTTAAGACAATTGAATAAACACAGAAAAGTAGGTTAGTTTTTTATAGACACAGTAAAGTATTTATTTACAA ATACTGCTTATGCCTCTTTATTTGATAGGGCAAGAGCCTCTATTTTGCTAATTTTCCTGGCTGGTAAAGTATTAACTGAA AACAAAAGGAACAATGAACATAACTTGTGTCTAAAAATAGGCAGAGACCTTATCTAAAAATACTGTACTTTTCTCACTTA TAAAACACTTGGATCTGTGACTTTTACTGAACAGAATGTCCTTTACATTAGATGGATAAATGCTGATCGGTCAAAACTTG ATGGTTTTTTCTTGCGCCTGCGGCTTGGGAAGTGGGAAGAAGGGCTAGGTGGAACTGGATACCATGTGGCATATATAAAT GGTATAACTAAAATCACAACTTATTCTTTGAATGTGAAATATGCATGAATTAAGTTACTTTACCTCATTATGGATATCCC TGGAGTTTTTCATTGGTTTGATGAGACTATTGGCGGCTAGTGTTTTATTTTTATTATTTTGTTGGCTTTTTCTTATTTTC TTGTTCTCCTGTATGAACAGAGACCGAAACACATAGTTCAGAGCAGAATATAAGAAAATCTCTCTCAGTGAAAATGGGGG GGATCAAGTGTATGGTCCAAACTCAGTATATATCCAATCATGATTTTCTTGAGGTAATAATCAATTCTCATTTCTTAGTT GAGCTTGAGCAATTCTTGTTATAGCATAGTCTGTGCAAGCATAACCAATCAAAAGCTCATTATGCATTAAGATAAAAGAC ATAGAAACTTCTGCTGAAATTATTTGAATATTATTGTGTTTTGATTGGTTGTGCCTATAAAGTATAATATAAGCATGCAT TGTGCTCATGTGAGAATTGCTCTTATTACTTTTCCCTTGTTTCTTATTGTGTACCTATTGTTATTTAAGCTTTTAGTTTT CATGTCCATTTTGACTTGATTAATGATTTGATTGGAAGCCGAAAGAAAATGTGAAGATAGAAAATGGATGGAAAGAAAAA TGTGGAAAAGAGAAAATGTAAATGAAATTAAATAAGATTTTTTTTTGTTACAAGGACCCCGGTTACACCCCGGAAAATAA GATGATCTTATATGTCTAGATGGAGGAAAAAATTAAAGAAAAAAAAGGGGAAACTTCATTTATCTTCCTTGGATGGATGA AATAGTGAGAGGATAGAAATATTATATTGAATGAACTTTATATTCTTTTGAGATAATAGTGAGTAGGTGGATAGATTTAT ATCTCAATATAATTATCCTTCTATCTCTGTTTCTTCTTATGAGTGTGGAGAAAAAATTAATGTAAATCCCTTTTTTTTTA TCTTCCCTGTATTTTATTTCTATTTATAACTAAACAAAAGAAATTGGTATTGGTGCATGTTTGGATTGAAATTAAGATGG GTTTTAATGGAGTTTTGCAGCTTTCCTCGGTGAAAAAGCCAATGGATCAAAGTTACTGGATTAGGATGAAAATTGCTTTT TCTTAACTTCCATTACACGGAATGTGTTTCCAAACACAATAATTTTCTCATTTGTCTCGTTTTATGCAGGAAGAAATCAT GGAATGGTGGTCTACCAGCTCAGAAGCTGGTGTTCAGATTCCATCAGAAGAAGAGCTGATAAAGAAACTTAAGATGAAAA GAATGTTAGGTCTGTAGAAATTTATTAAGTGTATATATAAGTAATTACCACATAAGCATTTTGTTCTCTCTCTTTTATAT TAGGATGGTAGGATATATTCAGTTTGGGGAAGTTTTCTTAATTTTTTCACTAATAATTATAAACATATTTTTATTTTTAA AGATTTATGTAAAAAACAACAGTGATTCGATTTAAAGGAATTATATATTTATTCATCCAATCACAT
CDS sequence (LotjaGi2g1v0451800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTTTCTCCACCACAAAGTGTAACTGGCGGCAGGCTTACCGCTGATGAACCTGTGGGTGATGTTCTTGTAAAACC TATAGCTGTCATATGTACCAACAGTGATATTGCTGCAACATATGCTTCTACTATGAATCCAACTACTGATTCAGGTGTCA ACCCTGAGTGTAAAGTATATGAAGAAAATGATATAGGAGCTGGATCTAGTGGTAATAAGGAGGAAATGAACACTTCAGAA AGAGCACCTAATTTGTCTAATGATCAAAATGAGAATCTAGCAAATGATTGGGAGAAGAGTACTGGTGGTGATCAAGCCAA GATTGGAACTGATCAAATATCTGGGACAACGGGAAACAAATTTTCTGCTATTTCAGGTCATGTTGACCAAAGGCCATTTG ATGCTTTATTACTTCAATCAGATGAAGCTAAACCTACCATGGAGCGAAATCCTTCACCAGGGAGACCCTCCATTGGAGGT GTAGATATTGGTACTGGAAAAAAGGCAGTTGTAGAAGATGATTTACATGCTACTGTTGAGCCTATAATTCCAGGAGCTAA TGTAACATCCTCCGGCAAGAGTCCTTTAGAAAAATCGGAATCTAGTGCTGAGAATGATATACAACCTGTCAACTGCAATG CTGCATGTCCTGCGACAAGCGGAGTTATTGCTAATGAGATTAAAAACAAATCTCATGACAAAAAAATGATTCTATTATGT GATAAAATTCTTCCAGTTATGCATTCTCCATGTAATAGCAGAATTAATATGTCAAGAAACAAAGGCAAGGAAAAGTCCTT ATCAGACGGTGATGCAAATGTAAGATTATCAAAGGAGGAGAATGACAGTCAATCAAGTGTTGAAAGCTGTAACAGTACTG AGTTTTTTCCCAAGGGTAAGAAGAGACCTAACTTTCAACAGCAGTTGATTCTTGGGAGTAAAAGAGTGAAGAAAAAGCAC GTTGAAGAAACTTCTGGTTCCAAATCCTATGTTAAAAAGGATATTTCATTCATTAACTGGATATCAAACATGGTAAAAGG ACTCTCACATTCAATTCAAAATGGTTCAAACACTTTGGCTGTTACTCTCGCAAATCGAGATTATCATGATCTACGGCGGC CTGATGAGAAACTTGTCACATGCAAAATGAGTCAAGATCCTGGGCCAAAAAATACAGGATTCAAGTCCATTTTTCAGTCC ATGTATTGTTCAAGTTTGAAGAATGTAGGAACAAGAACTTTTCGTCAAGAAGGAGAGGGTAGTGAGGATTTAGAGCCAAG TAACATGGTACAGGGAATTGATGCTACTCCAATAACCTGTTGTGCAGAGAAAAACAGCTCTTCTGAAGCATGTACTCGGA GATATGATGCTGGTCCGTCCTCGCAGCCTATGATTATTCATGCAAATATTTTTAACAGTCAGGAAAGCAGCAAAAACAAC CCAGTTGAGGATGAAAATTGTTCCATCTTAGGCCTTATAAAGGAGAAGGAAACAATGGCATCAAATTCATCTTCATCCAG ACAAAATACAAATAATACTGAGAATATTGATTCCACTGCACCATCTGAGAGAAAGGAAGCAGACAATATCTGTCTTGGAA GAGATGCTCCAGGAAATATGTGGATAACTCGATTTTCTCCAAAATCGACTGCACCCTTGGTTATTTCTGATCACCTAGAT GAGAGATATGAATCTCAAGTCCACATCAATGATTGCCATAAACACATTTCGTATATGAAGAAAAACTGTAGAATTGAAGA AACTAGAGAACAACCCGCTAATGCCACAGAGGCTTTCACTGGTCTTCATGAAGATAAGGACAATAATGTCCATAATAATT TCAACAGCCTTTCATCTTCCCCAGGATTCAGAAACTCTGTACTGATGACTTCAATGTTTGCAAGGAGATTTGGTGCCATC AAACATACCACACCGACAAACAAAGCAGATTGTACCTCTCAGGTAGTTCTGTTTTGTTTGTTTTGTGGGACAAGAGGTCA CCAACTCTGTGATTGCTCAGAAATTGCGGAAGGCGAGCTAGAAGATCTCCAAAAGAATATGAATTCATATGGAGAATTGG AAGGAAGTCCCTGTATATGCATTAAATGTTTTCAGACTAACCACTGGGCAATTTCATGTCCTACTTCAATCTCAAAAAGG AAACATGAATGGGAAGTTAAACCCTTGGTCAATGATTGCATTCTTAGCGGAGAACATTTAATCCCAAGCATTGAAGGGAG TTCAAGGTTTCTGAGTGGTAAGGCTGGCCTAATTTTATCCGGTGGTACTATCAACGATGGAAGTGATCACCAAGCAAATC AGAATATTAATTTGAAGCGGAAATTAAATGAAAAGACAACCTTCAAGATAGGTTGCAGTGCATCATTCAAGAAACAATGC AGTTCAAGTTCAGAGGAAAACAAATTCAAAGGAAATCCAATAACATCTCCATCCAGATTGACTGGAAGGCAGATTTCACA CATACCAAAAGGAATCTTTGATGCAGTGAAAAAGCTTCGATTGTCCCGCACTGACATCTTGAGATGGATAAATGCTGATC GGTCAAAACTTGATGGTTTTTTCTTGCGCCTGCGGCTTGGGAAGTGGGAAGAAGGGCTAGGTGGAACTGGATACCATGTG GCATATATAAATGAGACCGAAACACATAGTTCAGAGCAGAATATAAGAAAATCTCTCTCAGTGAAAATGGGGGGGATCAA GTGTATGGTCCAAACTCAGTATATATCCAATCATGATTTTCTTGAGGAAGAAATCATGGAATGGTGGTCTACCAGCTCAG AAGCTGGTGTTCAGATTCCATCAGAAGAAGAGCTGATAAAGAAACTTAAGATGAAAAGAATGTTAGGTCTGTAG
Protein sequence (LotjaGi2g1v0451800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLSPPQSVTGGRLTADEPVGDVLVKPIAVICTNSDIAATYASTMNPTTDSGVNPECKVYEENDIGAGSSGNKEEMNTSE RAPNLSNDQNENLANDWEKSTGGDQAKIGTDQISGTTGNKFSAISGHVDQRPFDALLLQSDEAKPTMERNPSPGRPSIGG VDIGTGKKAVVEDDLHATVEPIIPGANVTSSGKSPLEKSESSAENDIQPVNCNAACPATSGVIANEIKNKSHDKKMILLC DKILPVMHSPCNSRINMSRNKGKEKSLSDGDANVRLSKEENDSQSSVESCNSTEFFPKGKKRPNFQQQLILGSKRVKKKH VEETSGSKSYVKKDISFINWISNMVKGLSHSIQNGSNTLAVTLANRDYHDLRRPDEKLVTCKMSQDPGPKNTGFKSIFQS MYCSSLKNVGTRTFRQEGEGSEDLEPSNMVQGIDATPITCCAEKNSSSEACTRRYDAGPSSQPMIIHANIFNSQESSKNN PVEDENCSILGLIKEKETMASNSSSSRQNTNNTENIDSTAPSERKEADNICLGRDAPGNMWITRFSPKSTAPLVISDHLD ERYESQVHINDCHKHISYMKKNCRIEETREQPANATEAFTGLHEDKDNNVHNNFNSLSSSPGFRNSVLMTSMFARRFGAI KHTTPTNKADCTSQVVLFCLFCGTRGHQLCDCSEIAEGELEDLQKNMNSYGELEGSPCICIKCFQTNHWAISCPTSISKR KHEWEVKPLVNDCILSGEHLIPSIEGSSRFLSGKAGLILSGGTINDGSDHQANQNINLKRKLNEKTTFKIGCSASFKKQC SSSSEENKFKGNPITSPSRLTGRQISHIPKGIFDAVKKLRLSRTDILRWINADRSKLDGFFLRLRLGKWEEGLGGTGYHV AYINETETHSSEQNIRKSLSVKMGGIKCMVQTQYISNHDFLEEEIMEWWSTSSEAGVQIPSEEELIKKLKMKRMLGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 956 | 956 | 1.3E-226 | – | |
| PANTHER | 1 | 956 | 956 | 1.3E-226 | – | |
| MobiDBLite | 62 | 126 | 65 | - | – | |
| MobiDBLite | 70 | 124 | 55 | - | – | |
| MobiDBLite | 142 | 164 | 23 | - | – | |
| MobiDBLite | 184 | 206 | 23 | - | – | |
| MobiDBLite | 255 | 293 | 39 | - | – | |
| MobiDBLite | 258 | 282 | 25 | - | – | |
| MobiDBLite | 498 | 518 | 21 | - | – | |
| MobiDBLite | 498 | 531 | 34 | - | – | |
| SMART | 658 | 674 | 17 | 2.8 | ||
| Coils | 673 | 693 | 21 | - | – | |
| SMART | 699 | 715 | 17 | 0.11 | ||
| Gene3D | 829 | 953 | 125 | 2.4E-13 | ||
| SMART | 833 | 934 | 102 | 1.9E-11 | ||
| SUPERFAMILY | 833 | 951 | 119 | 7.98E-18 | ||
| Pfam | 836 | 931 | 96 | 1.6E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi2g1v0451800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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