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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0454200 |
| Transcript ID | LotjaGi2g1v0454200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tesmin/TSO1-like CXC domain protein; TAIR: AT4G14770.1 TESMIN/TSO1-like CXC 2; Swiss-Prot: sp|F4JIF5|TCX2_ARATH Protein tesmin/TSO1-like CXC 2; TrEMBL-Plants: tr|B3IX45|B3IX45_LOTJA Transcription factor CPP; Found in the gene: LotjaGi2g1v0454200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94726577..94732399) extracted from Lotus japonicus Gifu genome v1.2.
GCAATCTGCCCATACCGATGAGAAGAGGTATCATGACTGTTCAACAGATTCACTACCTTTTGAGAATCACTTTCAATTGC TTTTGAAAATCACTACCTTATTTGTTTTGTTTTTTTGTATTCGTTCGCATATTTTAATACGGATTTATTCACAATGACTC AAATATAAGATTTCTGCTTAATGTACCACAATAGTCAACATGAGTTTAAAAAAAAATAGTCAACATGTATGAATTGGTCC AATATGTAGTACAGTAATTATTTTTCCATATTGCATAAAGTAGTTATTATGAAAATTGGAAGCAATTAAAAGAAGAAAGT TCCCTTGGAACAAAGTGCATTAATCTCAACAGTGTGAGTGAGTAAATCTAAAATCTAAAACAATTATTTATGGTATGCAA AGCAAAGGAACCAACAAAAAGAAAAAGAAAAGAGGAACATAAAGAAAGACCGACAGCTGTTGTGGTAGGGCTATGTTGTG TTGTCCCCACCAGCAGCGAATCCTTCTTCTCCCGCTCGACCATTTCTTGAATCTTCCCTTTTTGCAAATCCAACAACACT CACTCACCCACACACACACACACACAGAGAAACTAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGATGTGGTGGTGAGA GATGGACATGGACACGCCGGAGAGGAACCGGCTCAACACTCCGGTATCCAAGTTCGAGGTTTGTATTTCGTTCCAAATTA TCCATTTTTCATCGCGATTTCGTTTCTGGGTTTTCTCTCTGTCGTTGCATGTCTTCGGCTACATTTTCTTTTCGAAAATT TGGGTTTTTTTTTTCTTGACATTTTACCAAAAATGTTTCTTTGTCACACCCTGTTGAAGTTTCGGTGATTTATTTCTGTG GGTTTGTTTGGTTTGTTTTCCTGAGAATTTTCGGAACTAATCTTGTAATGTCACTGTCAATTACTTCACTGCTGTGGATC TGTCACCAATTTCAGTTTTGGACAACTGTTAATTGTTTATTTTTCTCTTGGATTCGACTTTTCTTTTCTGTGTTAATTCG TCTTTTTTTTTTCTTCCCTTTTGGTATGTAGCCAGTTAATTTTGAAAGTTTTCCCCCCAAACTTGATTCTCTAGCTTCAA GTTTCTACAGTCCTCTGTTTAGGGGTCAATGGTCATTTTCCTGTAGGTTTTTATCCCTCAATGGACTAACAATATTAGGA TTTTCTTTCTACATTATTGCATCTATAGTGTGTGTGATTAGAATAAAGTTCAATCAGCAATTCTTGTCTGATCTGGTCCG TTGATAATTTATTGATAAATTACTCTCTGATTTCCTATGCTTGTTGTTGGTGAACTTTGAAATGATTACCCCCATGGTTT TTCTTACATAAGTTACACTTCATTCCTGGGCTATATGAGATTGTCCTCTTATTTATCCAGTTTAATTATGGTTTTAACCT TTGCTATGTGCAGGATTCACCTGTATTCAACTATATCAACAATTTATCTCCTATAAAGACTGTTAAATCTGTGCACATCA CTCAGACATTCAATTCACTTAGTTTCTCATCTCCTCCATCTGTTTTCACATCACCCCATGTCAGCTGTCTCAAGGAATCT AGATTCGTTAGCAGGTAAACTTGAAATCTCTTAAATTCTTTATCCTTTTTAGTTTTTAGTATTTACAGTTCTTCAATAAT TTTGAGTAGATTTATCTATGTAGATGCTATACCTAGTGACCAATTTCTGATGGTAATCTATTATTTATCTCCAGGCATAA CCAATTCGGCACATCAAAACCTAAGGTTTCATCTGAAGATGTAAATAAAGTTCACTCAAGTGAAGAGGCTCTTGCTATTC ATGGAGATCATGACTCAAATGAACCACAGGAAAATGCTGATCGAGGGATTTCAGTTGAAGATGCTTCGATTGAGTTATCT GGTGAACACACAAAATTCTCAGTGGAGCTGCCACAAGCCTTACAGTATAATTGTGGTAGTACTAGCTATGATCCTCCACT TCGTGATGATGAGGCTAACACTCTTTTGGAATTGCCTGGGGAGGCAGCACCAGAGGTTGCCTATGTTCAACAAATAGTTT CAATTGAGCATGAGGTGCATATTCAGGAAATGTGTCAGGTCGAGGAGAACGGTGAAGGCGCAGACTGTGATTGGGATAGT TTACTTCCCAATGCTACTGATCTGTTACTTTTTAACTCCCCGAATCAAGCCGAAACTTTTAAGAATCTCATGCAGAAACC CTTGAGATCTTCTATGCGACTTGGTGATGTTATGTCTCTGCTTCCGCAATCTACCCTCAGTAATGATCAGAACATACACA CAGTTGATTCAGTTGTTCCCGGTGCTGAACATGAAATTGAAGCTAATTGTTCTGAGACAGTAGCAATCAACAGCACTGAG CCTTCACAGGACACTCTTGCTGATGTTGATTTGTCGACTAGCAATCCAAATGAGAAAATGGATGATAAGGTAGGAAAGTG AAATCTGTTAGTGTTGACGTGAATTATATGTATTTTAAGTTTTTAACTTTTTTGCATGTAGTTATATGACTTATATCTTT TTATCTTAAAGACATGAGTTTCTAGGATTTGGGTATGAGTATAATTACTCATATGAAGTGTAGATACAAAACTATTTTCT TAAAAGAAAATTCATCCGCATACATGTACTAGCACATTATTAAATCTTTTTTTAAATCTTAAATCATATAAGAATCCTAT TTCACATTTTTATGTGTATCACTGCATATTATTGTTGTCATTTACCTTTTGTTATGGTTTTTATTAGTTTGACATTTCTA ATTCTACTAAATGACTGTTTTTCACTGGGGTTTGTCATCAAAGTCAATCACTACTTTATAAGTGCATCATGGCAAAATTG AAAATTATATTTTCAATCAATCCTTCTCTGCATTTTGCATCACCCATATTGAGAAAGGGTTTTTGTTCATTGCATTCCCT AAAATATGCTGCAGCACAGAAGCATATTCTGTTTGTGGTTTATGATTATTTGAAACTAAAATTTTCTCCCAGTTCTTTCA TCATTGTAGTTAACAAATGAATCACTTTTGTGTTTGGTTTTAAGGTTGTTTCTGTCACGCACCGTGGTACACGGAGGCGC TGTCTTGACTTTGAGATGGCCAGTGTGCGAACGAAGAACTCAGATGGTAATTCAAACGCCAGTTCTAGTACAACACAGTC TGAAGTGAGGATTGCTGCTAATGAAAAACAACTGCTTCCTATAAAGCGCGATGCGAATTCACAAAGGCGCATGTTGCCTG GAATCGGTTTACACCTGAATGCACTTGCAACCTTTACAGATTACAAAGGCATACAACAAAGTGAAAAGTTTTCTTCTTCT GGAAGACAACTCAGTCTTGCCAGCTCTTCTTCCTTGCAACTCTCTGCAAGCCTGGAACATCAGAATCTGGTACCTGTAAC AGCTGAAAGAGAATTGGACCCATCAGAAAATGGGGTTCAGCCTGCTGAAGATAGTTCCCAGGCAGCTAGTGAAGATTTCA ATCAGAATAGCCCCAAAAAGAAAAGGTGAATGCAGTCGTTGATTACCGTACTCATGTTTATGCTTGATAAACTTCTTCTC ATTATTTTGAGTTTTTCTTTTCTTTATTTGACTTATATTAAGTTGGATTTGCAGGCGTAAGGTGGAGCCAGCTGGAGATA CTGAGGGCTGCAAACGTTGCAATTGCAAGAAGTCAAAGTGTTTGAAGCTGTATGTTGAAATGAATATTCTTTTATCTTCT TTTTTTGTTCTTGGACTTGTAATGTTATGTTTTCATTACATGAAAGCTCGAGAACAAAAAAAGTGGAAAGAAAATGACCT TACTGGTTTTGAAATAAACCTTTATTTTTTTTTTTTCATAATCAGATATTGTGAGTGCTTTGCTGCTGGAGTCTACTGCA TAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAA TCTCGCAACCCGCTTGCATTTGCTCCTAAAGTCATCAGAAATTCTGATTCTGTTCCTGAAATTGGGGTTTGAAGATAAAC TTAACTATTCATCATCATTGCAATTTTGATCATATTTTACAGTATATTAATTATGTTCTTCTTGCAGGATGACCCAAATA AAACTCCAGCTTCAGCACGCCACAAAAGGGGATGCAACTGCAAGAAATCAAACTGCCTAAAGAAATATTGTGAATGTTAT CAGGTTTTCATCCTTGCTATATCTTTGCACGCTTCCAATTTCAGTTAAAAAATGAAATACAAATTGTAGTTTTCTTTTGA AGGGTGGTGTTGGTTGCTCCATTAGCTGCAGATGTGAAGGGTGCAAGAACGCATTTGGTAGAAAGGATGGTAGGTTTTCC CTAACATCGCACCTGATTGCAACATAAAGCTTACAATATGGTTTCATTCATTTGTTGTCACAATTCCTTATATAATTTTT TTTTTCAGGTTCTGCTCAAGCTGAACCAGAAGAAGAAACAGAAACAAGTAACAAAGGAGTGATGGAAAAAGCCTTGCAGA AAACTGAAATTCAGAATATCGAAGAACATCAAGATTCTTCTGTTGCCGCAACACCATTACGGCTTTCCAGGTTTGAAATG CTGATTGTTTGTGTGTTTCAACTTTTAATTATCGTTACATTCACCTAAATGTTCTTTTCTTCAGTGCATCGTGAGACATG GATTTCCGTTAAAAGTTTTTTGAAATATTAGTAATGGAAATCCAAGCACAAATCAATATCCCGGATCATGATCTTATGTC CCTAAATGATGTCTCGATTTCCCGTCCCACTAATGGAATATTGCCATGTTGTTTAAAAAACAAATGCGTGAGACAGTTTC AAATTTACATAGAGGATTTTTAATTGACATGGCAAGATTTCACCAGTGGGGCTAAAAATTGAGACATGATTTGGGGACAG AAGATTTCAATACCAATATCCCTTATTGATTGATCTTTCATTTGTGTGGGACAGGCCATTGCTTCCATTGCCCTTCTCAT CAAAGGGAAAGCCACCGAGATCTTTTGTCACAACCATCTCTGGCTCTGCATTGTTCACCAGCCAAAAGCTTGGGAAGCCA AATTCTCTTTGGTCTCAAGCTAATAAGCATTTTCAAGGTGTTGTTCCAGAAGATGATGAAATGCCAGATATTCTCCATGG TGATAGCTCTCCTATCGCGTGCATCAAAAGTTCTTCTCCGAATAGCAAGAGGATATCCTCACCTAACTGTGAGATGAGAT CATCACCAAGTCGCAGAGGTGGCAGGAAGTTGATTTTACAATCTATTCCTTCATTTCCTTCTCTCACAACACACCCTTAG AACTGCTGTTATATGTTTCATTTTAAGTTACCCCCTCCCCCTTCTCTTGTTCATGTTTTTGTAGCTTGTTGCAATAGGAG CTATGTTTAGGTTTGTGTATATGGAGCTTTCTGTTTTACTTTGATAATAATGTTGTGTTTCTTCTGTAATTTAGTTTTAG TACTCAAGTGATGGTTATAACTTGTAATCTTTTCGAGGTTTAATGAGTTGCGAACTAAATTTGTTCTAGTTATGGAATCT CGTTCTAGTTACTCTAGAACAATTAGAAAATTCTCTAGAAGAAATATGAAGTTCTACTTCTAGCGGCAACATGCTATGGG GGTGGCTGTTTATGCTTTTTTGTCTTGATTAAGTTCCTAATGGGACTTGTTGGAGCTTTGTTCATATAAGCTGTTGATTT GTCTCAAAATGTGAATGTGCTTCATGCTGCAACTTCATCGACCAAACGAGATGTATAGTTGTA
CDS sequence (LotjaGi2g1v0454200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATGGACACGCCGGAGAGGAACCGGCTCAACACTCCGGTATCCAAGTTCGAGGATTCACCTGTATTCAACTATAT CAACAATTTATCTCCTATAAAGACTGTTAAATCTGTGCACATCACTCAGACATTCAATTCACTTAGTTTCTCATCTCCTC CATCTGTTTTCACATCACCCCATGTCAGCTGTCTCAAGGAATCTAGATTCGTTAGCAGGCATAACCAATTCGGCACATCA AAACCTAAGGTTTCATCTGAAGATGTAAATAAAGTTCACTCAAGTGAAGAGGCTCTTGCTATTCATGGAGATCATGACTC AAATGAACCACAGGAAAATGCTGATCGAGGGATTTCAGTTGAAGATGCTTCGATTGAGTTATCTGGTGAACACACAAAAT TCTCAGTGGAGCTGCCACAAGCCTTACAGTATAATTGTGGTAGTACTAGCTATGATCCTCCACTTCGTGATGATGAGGCT AACACTCTTTTGGAATTGCCTGGGGAGGCAGCACCAGAGGTTGCCTATGTTCAACAAATAGTTTCAATTGAGCATGAGGT GCATATTCAGGAAATGTGTCAGGTCGAGGAGAACGGTGAAGGCGCAGACTGTGATTGGGATAGTTTACTTCCCAATGCTA CTGATCTGTTACTTTTTAACTCCCCGAATCAAGCCGAAACTTTTAAGAATCTCATGCAGAAACCCTTGAGATCTTCTATG CGACTTGGTGATGTTATGTCTCTGCTTCCGCAATCTACCCTCAGTAATGATCAGAACATACACACAGTTGATTCAGTTGT TCCCGGTGCTGAACATGAAATTGAAGCTAATTGTTCTGAGACAGTAGCAATCAACAGCACTGAGCCTTCACAGGACACTC TTGCTGATGTTGATTTGTCGACTAGCAATCCAAATGAGAAAATGGATGATAAGGTTGTTTCTGTCACGCACCGTGGTACA CGGAGGCGCTGTCTTGACTTTGAGATGGCCAGTGTGCGAACGAAGAACTCAGATGGTAATTCAAACGCCAGTTCTAGTAC AACACAGTCTGAAGTGAGGATTGCTGCTAATGAAAAACAACTGCTTCCTATAAAGCGCGATGCGAATTCACAAAGGCGCA TGTTGCCTGGAATCGGTTTACACCTGAATGCACTTGCAACCTTTACAGATTACAAAGGCATACAACAAAGTGAAAAGTTT TCTTCTTCTGGAAGACAACTCAGTCTTGCCAGCTCTTCTTCCTTGCAACTCTCTGCAAGCCTGGAACATCAGAATCTGGT ACCTGTAACAGCTGAAAGAGAATTGGACCCATCAGAAAATGGGGTTCAGCCTGCTGAAGATAGTTCCCAGGCAGCTAGTG AAGATTTCAATCAGAATAGCCCCAAAAAGAAAAGGCGTAAGGTGGAGCCAGCTGGAGATACTGAGGGCTGCAAACGTTGC AATTGCAAGAAGTCAAAGTGTTTGAAGCTATATTGTGAGTGCTTTGCTGCTGGAGTCTACTGCATAGAACCCTGCTCCTG TCAGGATTGCTTCAACAAACCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGCAACCCGCTTG CATTTGCTCCTAAAGTCATCAGAAATTCTGATTCTGTTCCTGAAATTGGGGATGACCCAAATAAAACTCCAGCTTCAGCA CGCCACAAAAGGGGATGCAACTGCAAGAAATCAAACTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTG CTCCATTAGCTGCAGATGTGAAGGGTGCAAGAACGCATTTGGTAGAAAGGATGGTTCTGCTCAAGCTGAACCAGAAGAAG AAACAGAAACAAGTAACAAAGGAGTGATGGAAAAAGCCTTGCAGAAAACTGAAATTCAGAATATCGAAGAACATCAAGAT TCTTCTGTTGCCGCAACACCATTACGGCTTTCCAGGCCATTGCTTCCATTGCCCTTCTCATCAAAGGGAAAGCCACCGAG ATCTTTTGTCACAACCATCTCTGGCTCTGCATTGTTCACCAGCCAAAAGCTTGGGAAGCCAAATTCTCTTTGGTCTCAAG CTAATAAGCATTTTCAAGGTGTTGTTCCAGAAGATGATGAAATGCCAGATATTCTCCATGGTGATAGCTCTCCTATCGCG TGCATCAAAAGTTCTTCTCCGAATAGCAAGAGGATATCCTCACCTAACTGTGAGATGAGATCATCACCAAGTCGCAGAGG TGGCAGGAAGTTGATTTTACAATCTATTCCTTCATTTCCTTCTCTCACAACACACCCTTAG
Protein sequence (LotjaGi2g1v0454200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDMDTPERNRLNTPVSKFEDSPVFNYINNLSPIKTVKSVHITQTFNSLSFSSPPSVFTSPHVSCLKESRFVSRHNQFGTS KPKVSSEDVNKVHSSEEALAIHGDHDSNEPQENADRGISVEDASIELSGEHTKFSVELPQALQYNCGSTSYDPPLRDDEA NTLLELPGEAAPEVAYVQQIVSIEHEVHIQEMCQVEENGEGADCDWDSLLPNATDLLLFNSPNQAETFKNLMQKPLRSSM RLGDVMSLLPQSTLSNDQNIHTVDSVVPGAEHEIEANCSETVAINSTEPSQDTLADVDLSTSNPNEKMDDKVVSVTHRGT RRRCLDFEMASVRTKNSDGNSNASSSTTQSEVRIAANEKQLLPIKRDANSQRRMLPGIGLHLNALATFTDYKGIQQSEKF SSSGRQLSLASSSSLQLSASLEHQNLVPVTAERELDPSENGVQPAEDSSQAASEDFNQNSPKKKRRKVEPAGDTEGCKRC NCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRNSDSVPEIGDDPNKTPASA RHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAQAEPEEETETSNKGVMEKALQKTEIQNIEEHQD SSVAATPLRLSRPLLPLPFSSKGKPPRSFVTTISGSALFTSQKLGKPNSLWSQANKHFQGVVPEDDEMPDILHGDSSPIA CIKSSSPNSKRISSPNCEMRSSPSRRGGRKLILQSIPSFPSLTTHP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 765 | 763 | 9.8E-271 | – | |
| PANTHER | 3 | 765 | 763 | 9.8E-271 | – | |
| MobiDBLite | 294 | 309 | 16 | - | – | |
| MobiDBLite | 294 | 315 | 22 | - | – | |
| MobiDBLite | 329 | 353 | 25 | - | – | |
| MobiDBLite | 333 | 353 | 21 | - | – | |
| MobiDBLite | 432 | 476 | 45 | - | – | |
| MobiDBLite | 442 | 457 | 16 | - | – | |
| MobiDBLite | 458 | 476 | 19 | - | – | |
| SMART | 475 | 516 | 42 | 2.3E-18 | ||
| ProSiteProfiles | 476 | 601 | 126 | 37.188 | ||
| Pfam | 478 | 513 | 36 | 1.4E-11 | ||
| SMART | 561 | 602 | 42 | 5.6E-17 | ||
| Pfam | 563 | 599 | 37 | 1.1E-11 | ||
| MobiDBLite | 602 | 622 | 21 | - | – | |
| MobiDBLite | 606 | 620 | 15 | - | – | |
| MobiDBLite | 722 | 766 | 45 | - | – | |
| MobiDBLite | 722 | 741 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0454200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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