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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0455800 |
| Transcript ID | LotjaGi2g1v0455800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT2G32120.1 heat-shock protein 70T-2; Swiss-Prot: sp|Q9SKY8|HSP7H_ARATH Heat shock 70 kDa protein 8; TrEMBL-Plants: tr|I1JAU2|I1JAU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0455800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94892424..94894145) extracted from Lotus japonicus Gifu genome v1.2.
TGCAGGATGGCAGAAACTGCTTATACTGTGGCATCAGACAGTGAAATCACTGGGGAGGACAAGTCATCTACTTTTCCAGA AATTGCAATTGGAATTGATATTGGCACATCACAATGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTCTAAAGA ACACAAGAAATCAGAAGATTATGAGATCATATGTGACTTTCAAAGATGACATCCCCTCTGGTGGAGTTACTGGACAACTC TCCCATGAGCATGAGATGCTGTCTGGAGCAACAATTTTCAACATGAAACGCTTGATTGGCAGAGTTGACACTGACCCAGT TGTCCATACAAGTAAAAATCTCCCATTTCTGGTGCAGACCTTGGGCGTCGGTGTTCGCCCATTTATTGCTGCATTAGTGA ACAATATGTGGAGATCCACTACTCCAGAAGAAGTCCTTGCAATATTTCTGGTGGAATTGAGAGCAATGGTTGAAACTCAG CTGAAGCACCCCATAAGAAATGTGGTTCTTACAGTTCCGGTTTCGTTCAGTCGATTCCAGTTAACCCGGGTAGAGCGCGC TTGTGCAATGGCTGGTCTTCATGTTCTTAGGCTCATGCCTGAACCAACAGCAGTGGCTTTGTTATATGGTCAGCAACAGC AGCAGGCTTCTCATGAGAATATGGGCAGTGGGAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGAT GTTGCTGTGACCGTTACTGCAGGAGGCGTATCTCAGATAAAAGCATTGGCCGGAAGTACCATTGGTGGAGAAGACTTACT GCAGAATATGATGCATCATCTCTTACCTGATTGTGAGAATATATTCAAGAACCATGGGGTTAAAGAAATTAAATCAATGG GCCTGCTCCGAGTTGCAACCTTGGATGCAATTCATCGGCTTTCATCTCAGAAGAGCGTTCAGGTTGATGTAGATTTGGGG GATGGTTTGAAGATAAACAAGGTTATAGACTGCGAGGAGTTTGAGGAGGTAAACAAAAATGTGTTTGAGAAATGTGAAAG CCTTATCATCCAATGCTTGCAAGATTCAAAAATAGAAGTTGAGGATGTAAATGATGTGATAATTGTAGGTGGATGTTCTT ATATCCCAAGAGTGAAGAATCTCGTTACTAACATTTGTAAAGGGAAGAAGCTTTATGAAGGTATAAATCCTCTGGAAGCA GCAGTTTGTGGCGCAGCAATTGAAGGAGCTGTTGCTTTAGGAATCAATGATCCCTTTGGCATCTTGGACTTGTTAACTAT TCAAGCCACACCTCTTGCCATTGGAATTCGAGCTGATGGGAACAACTTCATCCCTATCATTCCGAGGAACACCACAATGC CGGCACGAAAAGAGCTAGTTTTCACAACTATTCATGATAATCAAACCGAGGCATTGATCCTGGTCTATGAAGGTGAGGAA AAGAAGGCAGAAGAAAACCACTTGTTGGGATATTTCAAGATAGTAGGAATCCCTGCAGCACCTAAAGGAGTACCAGAAAT CAATGTTTGTATGGATATAGACTCTGCAAACGTGCTGAGAGTTTTAACTGGTGTTGTGATGCCTGGATCTCGTCAAACTG CAGTTCCTGTTATGGAAGTGAGGATGCCAATGGTGGATGATGGGCATGGTTGGTGCGCTGAGGCCCTAAACAGAACCTTT GGTGCCACACTAGATTTGGTCACTCTCCATATAAAGGCATAA
CDS sequence (LotjaGi2g1v0455800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAACTGCTTATACTGTGGCATCAGACAGTGAAATCACTGGGGAGGACAAGTCATCTACTTTTCCAGAAATTGC AATTGGAATTGATATTGGCACATCACAATGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTCTAAAGAACACAA GAAATCAGAAGATTATGAGATCATATGTGACTTTCAAAGATGACATCCCCTCTGGTGGAGTTACTGGACAACTCTCCCAT GAGCATGAGATGCTGTCTGGAGCAACAATTTTCAACATGAAACGCTTGATTGGCAGAGTTGACACTGACCCAGTTGTCCA TACAAGTAAAAATCTCCCATTTCTGGTGCAGACCTTGGGCGTCGGTGTTCGCCCATTTATTGCTGCATTAGTGAACAATA TGTGGAGATCCACTACTCCAGAAGAAGTCCTTGCAATATTTCTGGTGGAATTGAGAGCAATGGTTGAAACTCAGCTGAAG CACCCCATAAGAAATGTGGTTCTTACAGTTCCGGTTTCGTTCAGTCGATTCCAGTTAACCCGGGTAGAGCGCGCTTGTGC AATGGCTGGTCTTCATGTTCTTAGGCTCATGCCTGAACCAACAGCAGTGGCTTTGTTATATGGTCAGCAACAGCAGCAGG CTTCTCATGAGAATATGGGCAGTGGGAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCT GTGACCGTTACTGCAGGAGGCGTATCTCAGATAAAAGCATTGGCCGGAAGTACCATTGGTGGAGAAGACTTACTGCAGAA TATGATGCATCATCTCTTACCTGATTGTGAGAATATATTCAAGAACCATGGGGTTAAAGAAATTAAATCAATGGGCCTGC TCCGAGTTGCAACCTTGGATGCAATTCATCGGCTTTCATCTCAGAAGAGCGTTCAGGTTGATGTAGATTTGGGGGATGGT TTGAAGATAAACAAGGTTATAGACTGCGAGGAGTTTGAGGAGGTAAACAAAAATGTGTTTGAGAAATGTGAAAGCCTTAT CATCCAATGCTTGCAAGATTCAAAAATAGAAGTTGAGGATGTAAATGATGTGATAATTGTAGGTGGATGTTCTTATATCC CAAGAGTGAAGAATCTCGTTACTAACATTTGTAAAGGGAAGAAGCTTTATGAAGGTATAAATCCTCTGGAAGCAGCAGTT TGTGGCGCAGCAATTGAAGGAGCTGTTGCTTTAGGAATCAATGATCCCTTTGGCATCTTGGACTTGTTAACTATTCAAGC CACACCTCTTGCCATTGGAATTCGAGCTGATGGGAACAACTTCATCCCTATCATTCCGAGGAACACCACAATGCCGGCAC GAAAAGAGCTAGTTTTCACAACTATTCATGATAATCAAACCGAGGCATTGATCCTGGTCTATGAAGGTGAGGAAAAGAAG GCAGAAGAAAACCACTTGTTGGGATATTTCAAGATAGTAGGAATCCCTGCAGCACCTAAAGGAGTACCAGAAATCAATGT TTGTATGGATATAGACTCTGCAAACGTGCTGAGAGTTTTAACTGGTGTTGTGATGCCTGGATCTCGTCAAACTGCAGTTC CTGTTATGGAAGTGAGGATGCCAATGGTGGATGATGGGCATGGTTGGTGCGCTGAGGCCCTAAACAGAACCTTTGGTGCC ACACTAGATTTGGTCACTCTCCATATAAAGGCATAA
Protein sequence (LotjaGi2g1v0455800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAETAYTVASDSEITGEDKSSTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMRSYVTFKDDIPSGGVTGQLSH EHEMLSGATIFNMKRLIGRVDTDPVVHTSKNLPFLVQTLGVGVRPFIAALVNNMWRSTTPEEVLAIFLVELRAMVETQLK HPIRNVVLTVPVSFSRFQLTRVERACAMAGLHVLRLMPEPTAVALLYGQQQQQASHENMGSGSEKIALIFNMGAGYCDVA VTVTAGGVSQIKALAGSTIGGEDLLQNMMHHLLPDCENIFKNHGVKEIKSMGLLRVATLDAIHRLSSQKSVQVDVDLGDG LKINKVIDCEEFEEVNKNVFEKCESLIIQCLQDSKIEVEDVNDVIIVGGCSYIPRVKNLVTNICKGKKLYEGINPLEAAV CGAAIEGAVALGINDPFGILDLLTIQATPLAIGIRADGNNFIPIIPRNTTMPARKELVFTTIHDNQTEALILVYEGEEKK AEENHLLGYFKIVGIPAAPKGVPEINVCMDIDSANVLRVLTGVVMPGSRQTAVPVMEVRMPMVDDGHGWCAEALNRTFGA TLDLVTLHIKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 566 | 553 | 4.4E-253 | ||
| PANTHER | 14 | 566 | 553 | 4.4E-253 | – | |
| SUPERFAMILY | 26 | 210 | 185 | 6.33E-35 | ||
| PRINTS | 26 | 39 | 14 | 1.0E-25 | – | |
| Pfam | 27 | 520 | 494 | 3.5E-98 | ||
| CDD | 28 | 408 | 381 | 1.69383E-91 | – | |
| Gene3D | 28 | 406 | 379 | 2.9E-87 | – | |
| PRINTS | 54 | 66 | 13 | 1.0E-25 | – | |
| Gene3D | 91 | 146 | 56 | 2.9E-87 | – | |
| PRINTS | 166 | 186 | 21 | 1.0E-25 | – | |
| Gene3D | 212 | 390 | 179 | 2.9E-87 | – | |
| SUPERFAMILY | 224 | 410 | 187 | 7.92E-32 | ||
| Gene3D | 260 | 342 | 83 | 2.9E-87 | – | |
| PRINTS | 361 | 377 | 17 | 1.0E-25 | – | |
| PRINTS | 393 | 413 | 21 | 1.0E-25 | – | |
| Gene3D | 418 | 534 | 117 | 6.5E-35 | ||
| PRINTS | 421 | 440 | 20 | 1.0E-25 | – | |
| SUPERFAMILY | 423 | 529 | 107 | 2.88E-29 | ||
| PRINTS | 502 | 518 | 17 | 1.0E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0455800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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